EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACLG00000004462 (Gene tree)
Gene ID
113029199
Gene Symbol
puf60b
Alias
fe37c05|si:ch211-12p8.2|si:zc12p8.2|wu:fb33e11|wu:fe37c05|zgc:86806
Full Name
poly-U binding splicing factor b
Gene Type
protein_coding
Species
Astatotilapia_calliptera
Status
putative
Strand
Plus strand
Length
14309 bases
Position
chr9:21756699-21771007
Accession
ZDB-GENE-040625-116
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACLP00000006703RRM_1PF00076.221.6e-4412
ENSACLP00000006703RRM_1PF00076.221.6e-4422
ENSACLP00000006680RRM_1PF00076.221.8e-4412
ENSACLP00000006680RRM_1PF00076.221.8e-4422
ENSACLP00000006646RRM_1PF00076.222.9e-3712
ENSACLP00000006646RRM_1PF00076.222.9e-3722
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACLT00000006853-3089-ENSACLP00000006703496 (aa)--
ENSACLT00000006830-3140-ENSACLP00000006680513 (aa)--
ENSACLT00000006797-1434-ENSACLP00000006646477 (aa)--
Gene Model
Click here to download ENSACLG00000004462's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000004462's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACLG00000004462puf60b5635.294ENSACLG00000022181u2af2a6637.255
ENSACLG00000004462puf60b5437.255ENSACLG00000020793-6237.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACLG00000004462puf60b10085.413ENSG00000179950PUF6010085.413Homo_sapiens
ENSACLG00000004462puf60b10097.856ENSAPOG00000001713puf60b9897.856Acanthochromis_polyacanthus
ENSACLG00000004462puf60b10083.301ENSAMEG00000006406PUF609283.109Ailuropoda_melanoleuca
ENSACLG00000004462puf60b10077.821ENSACIG00000003263-9978.210Amphilophus_citrinellus
ENSACLG00000004462puf60b100100.000ENSACIG00000021705puf60b100100.000Amphilophus_citrinellus
ENSACLG00000004462puf60b10097.856ENSAOCG00000005395puf60b10097.856Amphiprion_ocellaris
ENSACLG00000004462puf60b10083.658ENSAOCG00000015558-9784.241Amphiprion_ocellaris
ENSACLG00000004462puf60b10095.363ENSAPEG00000011923puf60b9795.363Amphiprion_percula
ENSACLG00000004462puf60b10077.154ENSAPEG00000001836-9978.088Amphiprion_percula
ENSACLG00000004462puf60b10082.296ENSATEG00000006303-9883.268Anabas_testudineus
ENSACLG00000004462puf60b10098.635ENSATEG00000001730puf60b9898.635Anabas_testudineus
ENSACLG00000004462puf60b10085.988ENSAPLG00000010150PUF609985.988Anas_platyrhynchos
ENSACLG00000004462puf60b10085.305ENSACAG00000001645PUF609685.305Anolis_carolinensis
ENSACLG00000004462puf60b10085.221ENSANAG00000018626PUF6010085.221Aotus_nancymaae
ENSACLG00000004462puf60b10087.226ENSAMXG00000036570puf60a9787.625Astyanax_mexicanus
ENSACLG00000004462puf60b10081.973ENSAMXG00000041030puf60b10082.543Astyanax_mexicanus
ENSACLG00000004462puf60b10085.605ENSBTAG00000037493PUF609885.605Bos_taurus
ENSACLG00000004462puf60b8053.710WBGene00004389rnp-68354.704Caenorhabditis_elegans
ENSACLG00000004462puf60b10085.413ENSCJAG00000021485PUF609785.413Callithrix_jacchus
ENSACLG00000004462puf60b10085.029ENSCAFG00000001400PUF609285.029Canis_familiaris
ENSACLG00000004462puf60b10085.413ENSCAFG00020018754PUF609785.413Canis_lupus_dingo
ENSACLG00000004462puf60b10085.605ENSCHIG00000001618PUF608685.605Capra_hircus
ENSACLG00000004462puf60b10085.413ENSTSYG00000011912PUF6010085.413Carlito_syrichta
ENSACLG00000004462puf60b10080.762ENSCPOG00000014613PUF609380.762Cavia_porcellus
ENSACLG00000004462puf60b10085.605ENSCCAG00000007744PUF609785.605Cebus_capucinus
ENSACLG00000004462puf60b10085.413ENSCATG00000035405PUF609785.413Cercocebus_atys
ENSACLG00000004462puf60b10085.605ENSCLAG00000009154PUF609185.605Chinchilla_lanigera
ENSACLG00000004462puf60b10085.413ENSCSAG00000008878PUF6010085.413Chlorocebus_sabaeus
ENSACLG00000004462puf60b10085.029ENSCPBG00000005595PUF609785.221Chrysemys_picta_bellii
ENSACLG00000004462puf60b9850.000ENSCING00000008436-9945.841Ciona_intestinalis
ENSACLG00000004462puf60b6362.037ENSCING00000002156-8862.037Ciona_intestinalis
ENSACLG00000004462puf60b9749.689ENSCSAVG00000004765-9749.275Ciona_savignyi
ENSACLG00000004462puf60b9754.095ENSCSAVG00000001385-9953.743Ciona_savignyi
ENSACLG00000004462puf60b8184.834ENSCANG00000041843PUF6010084.834Colobus_angolensis_palliatus
ENSACLG00000004462puf60b10085.797ENSCGRG00001017442Puf609185.797Cricetulus_griseus_chok1gshd
ENSACLG00000004462puf60b10085.797ENSCGRG00000003717Puf609285.797Cricetulus_griseus_crigri
ENSACLG00000004462puf60b10079.681ENSCSEG00000014845-8980.677Cynoglossus_semilaevis
ENSACLG00000004462puf60b10097.856ENSCSEG00000019887puf60b9197.856Cynoglossus_semilaevis
ENSACLG00000004462puf60b10097.661ENSCVAG00000009386puf60b10097.661Cyprinodon_variegatus
ENSACLG00000004462puf60b9082.960ENSCVAG00000001560-9881.410Cyprinodon_variegatus
ENSACLG00000004462puf60b10087.476ENSDARG00000032175puf60a9992.340Danio_rerio
ENSACLG00000004462puf60b10082.163ENSDARG00000001241puf60b9998.413Danio_rerio
ENSACLG00000004462puf60b9971.012ENSDNOG00000043278PUF609071.012Dasypus_novemcinctus
ENSACLG00000004462puf60b10085.797ENSDORG00000004585Puf609485.797Dipodomys_ordii
ENSACLG00000004462puf60b8466.667FBgn0028577hfp9950.092Drosophila_melanogaster
ENSACLG00000004462puf60b9771.959ENSEBUG00000005470-8871.546Eptatretus_burgeri
ENSACLG00000004462puf60b10061.391ENSEBUG00000014291puf60b8463.462Eptatretus_burgeri
ENSACLG00000004462puf60b10085.413ENSEASG00005009695PUF609785.413Equus_asinus_asinus
ENSACLG00000004462puf60b10085.413ENSECAG00000024681PUF609685.413Equus_caballus
ENSACLG00000004462puf60b10088.400ENSELUG00000018443-9988.400Esox_lucius
ENSACLG00000004462puf60b10088.359ENSELUG00000006507puf60b9985.846Esox_lucius
ENSACLG00000004462puf60b10085.413ENSFCAG00000001045PUF6010085.413Felis_catus
ENSACLG00000004462puf60b10076.392ENSFALG00000001136PUF609776.775Ficedula_albicollis
ENSACLG00000004462puf60b10085.413ENSFDAG00000017177PUF609185.413Fukomys_damarensis
ENSACLG00000004462puf60b9682.485ENSFHEG00000021687PUF6010083.402Fundulus_heteroclitus
ENSACLG00000004462puf60b10098.051ENSFHEG00000020046puf60b10098.051Fundulus_heteroclitus
ENSACLG00000004462puf60b10083.012ENSGMOG00000006392puf60b9982.625Gadus_morhua
ENSACLG00000004462puf60b6689.213ENSGALG00000039901PUF609489.213Gallus_gallus
ENSACLG00000004462puf60b10097.856ENSGAFG00000021040puf60b10097.856Gambusia_affinis
ENSACLG00000004462puf60b10080.723ENSGAFG00000004334-9981.109Gambusia_affinis
ENSACLG00000004462puf60b10084.600ENSGACG00000004717puf60b9784.600Gasterosteus_aculeatus
ENSACLG00000004462puf60b10073.062ENSGACG00000001484-10071.984Gasterosteus_aculeatus
ENSACLG00000004462puf60b10085.029ENSGAGG00000013289PUF609185.221Gopherus_agassizii
ENSACLG00000004462puf60b10085.413ENSGGOG00000004646PUF609785.413Gorilla_gorilla
ENSACLG00000004462puf60b10083.903ENSHBUG00000009634-10083.903Haplochromis_burtoni
ENSACLG00000004462puf60b100100.000ENSHBUG00000015118puf60b100100.000Haplochromis_burtoni
ENSACLG00000004462puf60b10085.413ENSHGLG00000006111PUF609185.413Heterocephalus_glaber_female
ENSACLG00000004462puf60b10085.413ENSHGLG00100012362PUF609185.413Heterocephalus_glaber_male
ENSACLG00000004462puf60b10092.669ENSHCOG00000015541puf60b9993.421Hippocampus_comes
ENSACLG00000004462puf60b9867.255ENSHCOG00000000378-9966.163Hippocampus_comes
ENSACLG00000004462puf60b10082.576ENSIPUG00000004660puf60b9982.197Ictalurus_punctatus
ENSACLG00000004462puf60b10085.743ENSIPUG00000002453puf60a9985.542Ictalurus_punctatus
ENSACLG00000004462puf60b10085.605ENSSTOG00000025037PUF609285.605Ictidomys_tridecemlineatus
ENSACLG00000004462puf60b10085.797ENSJJAG00000001076Puf609285.797Jaculus_jaculus
ENSACLG00000004462puf60b10077.735ENSKMAG00000010106-10078.352Kryptolebias_marmoratus
ENSACLG00000004462puf60b10098.246ENSKMAG00000016745puf60b10098.246Kryptolebias_marmoratus
ENSACLG00000004462puf60b10094.347ENSLBEG00000012505puf60b10094.347Labrus_bergylta
ENSACLG00000004462puf60b7378.706ENSLACG00000005456PUF6010079.133Latimeria_chalumnae
ENSACLG00000004462puf60b10088.738ENSLOCG00000010106puf60b9888.738Lepisosteus_oculatus
ENSACLG00000004462puf60b10084.453ENSLAFG00000022929PUF609384.453Loxodonta_africana
ENSACLG00000004462puf60b10085.413ENSMFAG00000043373PUF609885.413Macaca_fascicularis
ENSACLG00000004462puf60b10085.413ENSMMUG00000013558PUF609785.413Macaca_mulatta
ENSACLG00000004462puf60b10085.413ENSMNEG00000031099PUF609785.413Macaca_nemestrina
ENSACLG00000004462puf60b10085.413ENSMLEG00000040009PUF6010085.413Mandrillus_leucophaeus
ENSACLG00000004462puf60b10096.491ENSMAMG00000010394puf60b10093.928Mastacembelus_armatus
ENSACLG00000004462puf60b10083.495ENSMAMG00000019476-9883.883Mastacembelus_armatus
ENSACLG00000004462puf60b100100.000ENSMZEG00005018515puf60b100100.000Maylandia_zebra
ENSACLG00000004462puf60b10083.658ENSMZEG00005019425-9883.658Maylandia_zebra
ENSACLG00000004462puf60b10085.988ENSMGAG00000013070PUF609589.535Meleagris_gallopavo
ENSACLG00000004462puf60b6989.167ENSMAUG00000014267-8889.167Mesocricetus_auratus
ENSACLG00000004462puf60b9670.431ENSMAUG00000018549-9570.697Mesocricetus_auratus
ENSACLG00000004462puf60b10085.413ENSMICG00000012226PUF609885.413Microcebus_murinus
ENSACLG00000004462puf60b10085.797ENSMOCG00000018780Puf609285.797Microtus_ochrogaster
ENSACLG00000004462puf60b10075.904ENSMMOG00000018059-9976.147Mola_mola
ENSACLG00000004462puf60b10098.051ENSMMOG00000004217puf60b10098.051Mola_mola
ENSACLG00000004462puf60b10085.221ENSMODG00000009161PUF609385.221Monodelphis_domestica
ENSACLG00000004462puf60b10090.253ENSMALG00000006797puf60b9790.253Monopterus_albus
ENSACLG00000004462puf60b10082.296ENSMALG00000000200-9882.296Monopterus_albus
ENSACLG00000004462puf60b10085.988MGP_CAROLIEiJ_G0019910Puf609185.988Mus_caroli
ENSACLG00000004462puf60b10085.988ENSMUSG00000002524Puf609185.988Mus_musculus
ENSACLG00000004462puf60b10085.988MGP_PahariEiJ_G0019920Puf609185.988Mus_pahari
ENSACLG00000004462puf60b10085.988MGP_SPRETEiJ_G0020812Puf609185.988Mus_spretus
ENSACLG00000004462puf60b10085.221ENSMPUG00000008137PUF609185.221Mustela_putorius_furo
ENSACLG00000004462puf60b10085.029ENSMLUG00000000238-9285.029Myotis_lucifugus
ENSACLG00000004462puf60b10081.548ENSMLUG00000013032-9781.548Myotis_lucifugus
ENSACLG00000004462puf60b10085.797ENSNGAG00000000712Puf6010085.797Nannospalax_galili
ENSACLG00000004462puf60b8199.281ENSNBRG00000013047puf60b9799.281Neolamprologus_brichardi
ENSACLG00000004462puf60b10083.658ENSNBRG00000017223-9883.658Neolamprologus_brichardi
ENSACLG00000004462puf60b10085.413ENSNLEG00000002156PUF609785.413Nomascus_leucogenys
ENSACLG00000004462puf60b7294.224ENSOPRG00000002147PUF607294.224Ochotona_princeps
ENSACLG00000004462puf60b7190.000ENSODEG00000014024-8990.000Octodon_degus
ENSACLG00000004462puf60b9863.690ENSODEG00000015513-9762.089Octodon_degus
ENSACLG00000004462puf60b10083.463ENSONIG00000014030-9783.463Oreochromis_niloticus
ENSACLG00000004462puf60b100100.000ENSONIG00000006247puf60b97100.000Oreochromis_niloticus
ENSACLG00000004462puf60b9771.800ENSOANG00000006962PUF609871.789Ornithorhynchus_anatinus
ENSACLG00000004462puf60b9982.081ENSORLG00000028655-9982.081Oryzias_latipes
ENSACLG00000004462puf60b10097.076ENSORLG00000012279puf60b10097.076Oryzias_latipes
ENSACLG00000004462puf60b10097.076ENSORLG00020007333puf6010097.076Oryzias_latipes_hni
ENSACLG00000004462puf60b9982.718ENSORLG00020018144-9782.718Oryzias_latipes_hni
ENSACLG00000004462puf60b9982.718ENSORLG00015016833-9782.718Oryzias_latipes_hsok
ENSACLG00000004462puf60b10096.699ENSORLG00015007718puf60b10096.699Oryzias_latipes_hsok
ENSACLG00000004462puf60b10094.656ENSOMEG00000001643puf60b10093.750Oryzias_melastigma
ENSACLG00000004462puf60b9982.897ENSOMEG00000022185-9782.685Oryzias_melastigma
ENSACLG00000004462puf60b10085.605ENSOGAG00000006259PUF609285.605Otolemur_garnettii
ENSACLG00000004462puf60b10083.977ENSOARG00000016235PUF609783.977Ovis_aries
ENSACLG00000004462puf60b10085.413ENSPPAG00000029933PUF609785.413Pan_paniscus
ENSACLG00000004462puf60b10085.413ENSPPRG00000003257PUF6010085.413Panthera_pardus
ENSACLG00000004462puf60b10084.722ENSPTIG00000009795PUF609883.109Panthera_tigris_altaica
ENSACLG00000004462puf60b10085.413ENSPTRG00000020670PUF609785.413Pan_troglodytes
ENSACLG00000004462puf60b10085.413ENSPTRG00000043963-9785.413Pan_troglodytes
ENSACLG00000004462puf60b10085.413ENSPANG00000021936PUF609785.413Papio_anubis
ENSACLG00000004462puf60b10090.058ENSPKIG00000012204puf60b10090.838Paramormyrops_kingsleyae
ENSACLG00000004462puf60b10089.400ENSPKIG00000004295puf60a9991.940Paramormyrops_kingsleyae
ENSACLG00000004462puf60b10085.413ENSPSIG00000004679PUF609885.413Pelodiscus_sinensis
ENSACLG00000004462puf60b10095.736ENSPMGG00000013444puf60b9995.736Periophthalmus_magnuspinnatus
ENSACLG00000004462puf60b10085.797ENSPEMG00000008820Puf609285.797Peromyscus_maniculatus_bairdii
ENSACLG00000004462puf60b10085.605ENSPCIG00000020270PUF609885.605Phascolarctos_cinereus
ENSACLG00000004462puf60b10081.942ENSPFOG00000011118-9782.330Poecilia_formosa
ENSACLG00000004462puf60b10098.051ENSPFOG00000019217puf60b9897.984Poecilia_formosa
ENSACLG00000004462puf60b10082.330ENSPLAG00000017025-9082.330Poecilia_latipinna
ENSACLG00000004462puf60b10098.051ENSPLAG00000010754puf60b10098.051Poecilia_latipinna
ENSACLG00000004462puf60b10082.136ENSPMEG00000009767-9082.524Poecilia_mexicana
ENSACLG00000004462puf60b10098.051ENSPMEG00000000838puf60b10098.051Poecilia_mexicana
ENSACLG00000004462puf60b10095.968ENSPREG00000005440puf60b10095.968Poecilia_reticulata
ENSACLG00000004462puf60b8183.175ENSPPYG00000018951-9583.175Pongo_abelii
ENSACLG00000004462puf60b8184.597ENSPCAG00000014837PUF6010084.597Procavia_capensis
ENSACLG00000004462puf60b10085.221ENSPCOG00000027981PUF609885.221Propithecus_coquereli
ENSACLG00000004462puf60b10096.203ENSPVAG00000016167PUF608196.203Pteropus_vampyrus
ENSACLG00000004462puf60b10083.658ENSPNYG00000004273-9883.658Pundamilia_nyererei
ENSACLG00000004462puf60b100100.000ENSPNYG00000002556puf60b100100.000Pundamilia_nyererei
ENSACLG00000004462puf60b10083.065ENSPNAG00000019415puf60b8983.065Pygocentrus_nattereri
ENSACLG00000004462puf60b10087.625ENSPNAG00000019909puf60a9988.024Pygocentrus_nattereri
ENSACLG00000004462puf60b10085.988ENSRNOG00000009960Puf609285.988Rattus_norvegicus
ENSACLG00000004462puf60b10085.413ENSRBIG00000035274PUF609785.413Rhinopithecus_bieti
ENSACLG00000004462puf60b10085.413ENSRROG00000029360PUF609885.413Rhinopithecus_roxellana
ENSACLG00000004462puf60b10084.069ENSSBOG00000027089PUF609784.069Saimiri_boliviensis_boliviensis
ENSACLG00000004462puf60b9084.861ENSSHAG00000006668PUF608984.861Sarcophilus_harrisii
ENSACLG00000004462puf60b9589.817ENSSFOG00015019371puf60a9889.817Scleropages_formosus
ENSACLG00000004462puf60b10082.659ENSSFOG00015019619puf60b9985.366Scleropages_formosus
ENSACLG00000004462puf60b76100.000ENSSMAG00000016381puf60b75100.000Scophthalmus_maximus
ENSACLG00000004462puf60b9783.936ENSSDUG00000007048-9584.970Seriola_dumerili
ENSACLG00000004462puf60b10096.565ENSSDUG00000009935puf60b9996.565Seriola_dumerili
ENSACLG00000004462puf60b10081.731ENSSLDG00000007366-9982.150Seriola_lalandi_dorsalis
ENSACLG00000004462puf60b10098.635ENSSLDG00000024011puf60b10096.015Seriola_lalandi_dorsalis
ENSACLG00000004462puf60b6578.466ENSSPUG00000013518PUF609279.091Sphenodon_punctatus
ENSACLG00000004462puf60b10095.636ENSSPAG00000012144puf60b10095.636Stegastes_partitus
ENSACLG00000004462puf60b10083.333ENSSPAG00000020285-10083.915Stegastes_partitus
ENSACLG00000004462puf60b10085.413ENSSSCG00000038800PUF609784.921Sus_scrofa
ENSACLG00000004462puf60b10083.462ENSTGUG00000012797-9983.462Taeniopygia_guttata
ENSACLG00000004462puf60b10096.491ENSTRUG00000005420puf60b10093.928Takifugu_rubripes
ENSACLG00000004462puf60b10081.690ENSTRUG00000008843-10081.288Takifugu_rubripes
ENSACLG00000004462puf60b10096.296ENSTNIG00000013675puf60b9996.296Tetraodon_nigroviridis
ENSACLG00000004462puf60b10079.532ENSTNIG00000003069-9979.922Tetraodon_nigroviridis
ENSACLG00000004462puf60b7765.242ENSTBEG00000001899-10066.097Tupaia_belangeri
ENSACLG00000004462puf60b5785.223ENSTBEG00000002751-9785.223Tupaia_belangeri
ENSACLG00000004462puf60b10084.261ENSTTRG00000017088PUF6010084.453Tursiops_truncatus
ENSACLG00000004462puf60b10085.413ENSUAMG00000024917PUF609785.413Ursus_americanus
ENSACLG00000004462puf60b10080.422ENSUMAG00000000272PUF609280.230Ursus_maritimus
ENSACLG00000004462puf60b10085.413ENSVVUG00000022527PUF6010085.413Vulpes_vulpes
ENSACLG00000004462puf60b10083.301ENSXETG00000012469puf609883.135Xenopus_tropicalis
ENSACLG00000004462puf60b10097.984ENSXCOG00000012355puf60b10097.984Xiphophorus_couchianus
ENSACLG00000004462puf60b10098.051ENSXMAG00000001862puf60b10098.051Xiphophorus_maculatus
ENSACLG00000004462puf60b10081.727ENSXMAG00000010507-9881.727Xiphophorus_maculatus

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