EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000004728 (Gene tree)
Gene ID: -
Gene Symbol: oscp1a
Alias: oscp1|zgc:171454
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 2323 bases
Position: chr22:8810479-8812801
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000007007	LSM	PF01423.22	3.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000007164	-	372	-	ENSACLP00000007007	123 (aa)	-	-

Gene Model

Click here to download ENSACLG00000004728's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000004728's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000004728	oscp1a	54	35.821	ENSACLG00000017406	snrpd1	60	35.821
ENSACLG00000004728	oscp1a	59	33.333	ENSACLG00000022738	lsm4	51	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000004728	oscp1a	96	66.102	ENSG00000181817	LSM10	96	66.102	Homo_sapiens
ENSACLG00000004728	oscp1a	96	67.797	ENSAMEG00000019854	LSM10	96	67.797	Ailuropoda_melanoleuca
ENSACLG00000004728	oscp1a	100	89.431	ENSACIG00000015420	oscp1a	81	89.431	Amphilophus_citrinellus
ENSACLG00000004728	oscp1a	86	84.259	ENSAOCG00000015607	LSM10	84	84.259	Amphiprion_ocellaris
ENSACLG00000004728	oscp1a	98	85.124	ENSAOCG00000015618	LSM10	100	85.124	Amphiprion_ocellaris
ENSACLG00000004728	oscp1a	98	85.124	ENSAOCG00000014654	-	100	85.124	Amphiprion_ocellaris
ENSACLG00000004728	oscp1a	98	85.124	ENSAPEG00000021845	-	100	85.124	Amphiprion_percula
ENSACLG00000004728	oscp1a	86	84.259	ENSAPEG00000021851	LSM10	84	84.259	Amphiprion_percula
ENSACLG00000004728	oscp1a	93	84.211	ENSATEG00000006310	oscp1a	84	84.211	Anabas_testudineus
ENSACLG00000004728	oscp1a	93	60.000	ENSACAG00000001231	LSM10	93	60.000	Anolis_carolinensis
ENSACLG00000004728	oscp1a	96	66.102	ENSANAG00000018759	-	96	66.102	Aotus_nancymaae
ENSACLG00000004728	oscp1a	96	64.407	ENSANAG00000031489	-	97	64.407	Aotus_nancymaae
ENSACLG00000004728	oscp1a	98	72.727	ENSAMXG00000025301	oscp1a	100	72.727	Astyanax_mexicanus
ENSACLG00000004728	oscp1a	96	66.102	ENSBTAG00000024096	LSM10	97	66.102	Bos_taurus
ENSACLG00000004728	oscp1a	96	66.949	ENSCJAG00000044880	LSM10	96	66.949	Callithrix_jacchus
ENSACLG00000004728	oscp1a	96	67.797	ENSCAFG00000003382	LSM10	96	67.797	Canis_familiaris
ENSACLG00000004728	oscp1a	96	67.797	ENSCAFG00020008920	LSM10	96	67.797	Canis_lupus_dingo
ENSACLG00000004728	oscp1a	96	66.102	ENSCHIG00000009398	LSM10	97	66.102	Capra_hircus
ENSACLG00000004728	oscp1a	96	67.797	ENSCAPG00000012567	LSM10	96	67.797	Cavia_aperea
ENSACLG00000004728	oscp1a	96	67.797	ENSCPOG00000039302	LSM10	96	67.797	Cavia_porcellus
ENSACLG00000004728	oscp1a	96	63.559	ENSCCAG00000008378	-	96	63.559	Cebus_capucinus
ENSACLG00000004728	oscp1a	96	66.102	ENSCCAG00000018913	-	96	66.102	Cebus_capucinus
ENSACLG00000004728	oscp1a	94	66.379	ENSCATG00000006589	LSM10	94	66.379	Cercocebus_atys
ENSACLG00000004728	oscp1a	96	66.949	ENSCLAG00000008633	LSM10	96	66.949	Chinchilla_lanigera
ENSACLG00000004728	oscp1a	94	66.379	ENSCSAG00000000134	LSM10	94	66.379	Chlorocebus_sabaeus
ENSACLG00000004728	oscp1a	96	64.167	ENSCHOG00000008615	LSM10	96	64.167	Choloepus_hoffmanni
ENSACLG00000004728	oscp1a	94	66.379	ENSCANG00000019928	LSM10	94	66.379	Colobus_angolensis_palliatus
ENSACLG00000004728	oscp1a	86	62.963	ENSCGRG00001022673	-	88	62.963	Cricetulus_griseus_chok1gshd
ENSACLG00000004728	oscp1a	94	67.241	ENSCGRG00001004317	-	95	67.241	Cricetulus_griseus_chok1gshd
ENSACLG00000004728	oscp1a	94	67.241	ENSCGRG00000014935	-	95	67.241	Cricetulus_griseus_crigri
ENSACLG00000004728	oscp1a	86	62.963	ENSCGRG00000015514	-	88	62.963	Cricetulus_griseus_crigri
ENSACLG00000004728	oscp1a	98	84.167	ENSCSEG00000010374	oscp1a	81	84.167	Cynoglossus_semilaevis
ENSACLG00000004728	oscp1a	96	77.966	ENSCVAG00000001536	oscp1a	89	77.966	Cyprinodon_variegatus
ENSACLG00000004728	oscp1a	96	75.424	ENSDARG00000101222	oscp1a	98	75.424	Danio_rerio
ENSACLG00000004728	oscp1a	67	73.494	ENSDARG00000109563	CABZ01074453.1	96	73.494	Danio_rerio
ENSACLG00000004728	oscp1a	96	66.949	ENSDNOG00000036662	LSM10	96	66.949	Dasypus_novemcinctus
ENSACLG00000004728	oscp1a	94	68.103	ENSDORG00000007579	Lsm10	94	68.103	Dipodomys_ordii
ENSACLG00000004728	oscp1a	94	66.379	ENSETEG00000005703	LSM10	94	66.379	Echinops_telfairi
ENSACLG00000004728	oscp1a	91	51.786	ENSEBUG00000001312	oscp1a	92	51.786	Eptatretus_burgeri
ENSACLG00000004728	oscp1a	96	66.949	ENSEASG00005012194	LSM10	96	66.949	Equus_asinus_asinus
ENSACLG00000004728	oscp1a	96	66.949	ENSECAG00000005071	LSM10	96	66.949	Equus_caballus
ENSACLG00000004728	oscp1a	96	66.102	ENSEEUG00000012032	LSM10	96	66.102	Erinaceus_europaeus
ENSACLG00000004728	oscp1a	96	83.898	ENSELUG00000007452	oscp1a	97	83.898	Esox_lucius
ENSACLG00000004728	oscp1a	93	66.087	ENSFALG00000000851	LSM10	93	66.087	Ficedula_albicollis
ENSACLG00000004728	oscp1a	96	66.949	ENSFDAG00000021056	LSM10	96	66.949	Fukomys_damarensis
ENSACLG00000004728	oscp1a	92	78.947	ENSFHEG00000001058	oscp1a	98	78.947	Fundulus_heteroclitus
ENSACLG00000004728	oscp1a	97	68.067	ENSGMOG00000019832	oscp1a	100	68.067	Gadus_morhua
ENSACLG00000004728	oscp1a	95	64.957	ENSGALG00000002127	LSM10	95	64.957	Gallus_gallus
ENSACLG00000004728	oscp1a	87	71.028	ENSGAFG00000016445	oscp1a	87	71.028	Gambusia_affinis
ENSACLG00000004728	oscp1a	99	87.705	ENSGACG00000002329	oscp1a	100	87.705	Gasterosteus_aculeatus
ENSACLG00000004728	oscp1a	94	63.793	ENSGAGG00000024848	LSM10	94	63.793	Gopherus_agassizii
ENSACLG00000004728	oscp1a	96	66.102	ENSGGOG00000003556	LSM10	96	66.102	Gorilla_gorilla
ENSACLG00000004728	oscp1a	100	99.187	ENSHBUG00000001722	oscp1a	100	99.187	Haplochromis_burtoni
ENSACLG00000004728	oscp1a	96	66.949	ENSHGLG00000011625	LSM10	96	66.949	Heterocephalus_glaber_female
ENSACLG00000004728	oscp1a	96	66.949	ENSHGLG00100001769	LSM10	96	66.949	Heterocephalus_glaber_male
ENSACLG00000004728	oscp1a	88	71.296	ENSIPUG00000005808	oscp1a	94	71.296	Ictalurus_punctatus
ENSACLG00000004728	oscp1a	96	67.797	ENSSTOG00000000606	LSM10	96	67.797	Ictidomys_tridecemlineatus
ENSACLG00000004728	oscp1a	98	87.603	ENSKMAG00000012143	oscp1a	100	87.603	Kryptolebias_marmoratus
ENSACLG00000004728	oscp1a	100	82.927	ENSLBEG00000017764	oscp1a	100	82.927	Labrus_bergylta
ENSACLG00000004728	oscp1a	94	63.793	ENSLACG00000015904	LSM10	89	63.793	Latimeria_chalumnae
ENSACLG00000004728	oscp1a	98	72.500	ENSLOCG00000018277	oscp1a	98	72.500	Lepisosteus_oculatus
ENSACLG00000004728	oscp1a	94	67.241	ENSLAFG00000009600	LSM10	94	67.241	Loxodonta_africana
ENSACLG00000004728	oscp1a	94	66.379	ENSMFAG00000009115	LSM10	94	66.379	Macaca_fascicularis
ENSACLG00000004728	oscp1a	94	66.379	ENSMMUG00000017338	LSM10	94	66.379	Macaca_mulatta
ENSACLG00000004728	oscp1a	94	66.379	ENSMNEG00000020023	LSM10	94	66.379	Macaca_nemestrina
ENSACLG00000004728	oscp1a	94	66.379	ENSMLEG00000025150	LSM10	94	66.379	Mandrillus_leucophaeus
ENSACLG00000004728	oscp1a	98	84.167	ENSMAMG00000004427	oscp1a	98	84.167	Mastacembelus_armatus
ENSACLG00000004728	oscp1a	100	100.000	ENSMZEG00005026307	oscp1a	100	100.000	Maylandia_zebra
ENSACLG00000004728	oscp1a	95	64.103	ENSMGAG00000015707	LSM10	95	64.103	Meleagris_gallopavo
ENSACLG00000004728	oscp1a	94	68.103	ENSMAUG00000016624	Lsm10	95	68.103	Mesocricetus_auratus
ENSACLG00000004728	oscp1a	94	67.241	ENSMOCG00000021943	Lsm10	95	67.241	Microtus_ochrogaster
ENSACLG00000004728	oscp1a	93	86.842	ENSMMOG00000013597	oscp1a	85	86.842	Mola_mola
ENSACLG00000004728	oscp1a	98	71.074	ENSMODG00000023328	LSM10	98	71.074	Monodelphis_domestica
ENSACLG00000004728	oscp1a	94	67.241	MGP_CAROLIEiJ_G0026467	Lsm10	96	67.416	Mus_caroli
ENSACLG00000004728	oscp1a	94	67.241	ENSMUSG00000050188	Lsm10	96	67.416	Mus_musculus
ENSACLG00000004728	oscp1a	94	67.241	MGP_PahariEiJ_G0028798	Lsm10	96	67.416	Mus_pahari
ENSACLG00000004728	oscp1a	94	67.241	MGP_SPRETEiJ_G0027446	Lsm10	96	67.416	Mus_spretus
ENSACLG00000004728	oscp1a	96	67.797	ENSMPUG00000018593	LSM10	96	67.797	Mustela_putorius_furo
ENSACLG00000004728	oscp1a	96	66.949	ENSMLUG00000023895	LSM10	96	66.949	Myotis_lucifugus
ENSACLG00000004728	oscp1a	94	66.379	ENSNGAG00000015011	Lsm10	94	66.379	Nannospalax_galili
ENSACLG00000004728	oscp1a	100	97.561	ENSNBRG00000014306	oscp1a	100	97.561	Neolamprologus_brichardi
ENSACLG00000004728	oscp1a	96	66.102	ENSNLEG00000033754	LSM10	96	66.102	Nomascus_leucogenys
ENSACLG00000004728	oscp1a	96	70.339	ENSMEUG00000006313	LSM10	96	70.339	Notamacropus_eugenii
ENSACLG00000004728	oscp1a	94	68.103	ENSOPRG00000001699	LSM10	94	68.103	Ochotona_princeps
ENSACLG00000004728	oscp1a	96	66.949	ENSODEG00000019161	LSM10	96	66.949	Octodon_degus
ENSACLG00000004728	oscp1a	98	98.333	ENSONIG00000020904	oscp1a	98	98.333	Oreochromis_niloticus
ENSACLG00000004728	oscp1a	98	68.595	ENSOANG00000002066	LSM10	98	68.595	Ornithorhynchus_anatinus
ENSACLG00000004728	oscp1a	96	66.949	ENSOCUG00000005333	LSM10	96	66.949	Oryctolagus_cuniculus
ENSACLG00000004728	oscp1a	98	81.818	ENSORLG00000009504	oscp1a	100	81.818	Oryzias_latipes
ENSACLG00000004728	oscp1a	98	81.818	ENSORLG00020016201	oscp1a	100	81.818	Oryzias_latipes_hni
ENSACLG00000004728	oscp1a	98	80.165	ENSORLG00015007794	oscp1a	100	80.165	Oryzias_latipes_hsok
ENSACLG00000004728	oscp1a	96	66.949	ENSOGAG00000002653	LSM10	96	66.949	Otolemur_garnettii
ENSACLG00000004728	oscp1a	96	66.102	ENSOARG00000009596	LSM10	97	66.102	Ovis_aries
ENSACLG00000004728	oscp1a	96	66.102	ENSPPAG00000023465	LSM10	96	66.102	Pan_paniscus
ENSACLG00000004728	oscp1a	96	66.949	ENSPPRG00000014619	LSM10	96	66.949	Panthera_pardus
ENSACLG00000004728	oscp1a	96	66.949	ENSPTIG00000004613	LSM10	96	66.949	Panthera_tigris_altaica
ENSACLG00000004728	oscp1a	96	66.102	ENSPTRG00000000539	LSM10	96	66.102	Pan_troglodytes
ENSACLG00000004728	oscp1a	94	66.379	ENSPANG00000023172	LSM10	94	66.379	Papio_anubis
ENSACLG00000004728	oscp1a	97	74.790	ENSPKIG00000003728	oscp1a	96	74.790	Paramormyrops_kingsleyae
ENSACLG00000004728	oscp1a	94	62.931	ENSPSIG00000000590	LSM10	94	62.931	Pelodiscus_sinensis
ENSACLG00000004728	oscp1a	62	72.368	ENSPMGG00000015718	oscp1a	99	72.368	Periophthalmus_magnuspinnatus
ENSACLG00000004728	oscp1a	82	70.297	ENSPCIG00000014865	LSM10	74	70.297	Phascolarctos_cinereus
ENSACLG00000004728	oscp1a	93	70.175	ENSPFOG00000020490	oscp1a	97	70.175	Poecilia_formosa
ENSACLG00000004728	oscp1a	95	69.231	ENSPLAG00000016537	oscp1a	89	69.231	Poecilia_latipinna
ENSACLG00000004728	oscp1a	92	68.142	ENSPMEG00000000174	oscp1a	98	68.142	Poecilia_mexicana
ENSACLG00000004728	oscp1a	95	70.085	ENSPREG00000009899	oscp1a	89	70.085	Poecilia_reticulata
ENSACLG00000004728	oscp1a	96	66.102	ENSPPYG00000001539	LSM10	96	66.102	Pongo_abelii
ENSACLG00000004728	oscp1a	96	66.949	ENSPCAG00000002520	LSM10	97	66.949	Procavia_capensis
ENSACLG00000004728	oscp1a	96	67.797	ENSPVAG00000008644	LSM10	96	67.797	Pteropus_vampyrus
ENSACLG00000004728	oscp1a	100	99.187	ENSPNYG00000003138	oscp1a	100	99.187	Pundamilia_nyererei
ENSACLG00000004728	oscp1a	98	78.512	ENSPNAG00000028829	oscp1a	100	78.512	Pygocentrus_nattereri
ENSACLG00000004728	oscp1a	94	66.379	ENSRNOG00000025716	Lsm10	95	66.379	Rattus_norvegicus
ENSACLG00000004728	oscp1a	94	66.379	ENSRBIG00000001561	LSM10	94	66.379	Rhinopithecus_bieti
ENSACLG00000004728	oscp1a	94	66.379	ENSRROG00000011414	LSM10	94	66.379	Rhinopithecus_roxellana
ENSACLG00000004728	oscp1a	96	66.102	ENSSBOG00000036413	-	96	66.102	Saimiri_boliviensis_boliviensis
ENSACLG00000004728	oscp1a	96	70.339	ENSSHAG00000018056	LSM10	96	70.339	Sarcophilus_harrisii
ENSACLG00000004728	oscp1a	96	71.186	ENSSFOG00015019954	lsm10	97	71.186	Scleropages_formosus
ENSACLG00000004728	oscp1a	95	89.744	ENSSMAG00000001297	oscp1a	100	89.744	Scophthalmus_maximus
ENSACLG00000004728	oscp1a	100	82.927	ENSSDUG00000007090	oscp1a	100	82.927	Seriola_dumerili
ENSACLG00000004728	oscp1a	98	83.471	ENSSLDG00000000800	oscp1a	100	83.471	Seriola_lalandi_dorsalis
ENSACLG00000004728	oscp1a	85	68.571	ENSSARG00000004211	LSM10	96	65.833	Sorex_araneus
ENSACLG00000004728	oscp1a	98	89.256	ENSSPAG00000009229	oscp1a	100	89.256	Stegastes_partitus
ENSACLG00000004728	oscp1a	96	66.102	ENSSSCG00000038916	LSM10	96	66.102	Sus_scrofa
ENSACLG00000004728	oscp1a	94	65.517	ENSTGUG00000001600	-	95	65.517	Taeniopygia_guttata
ENSACLG00000004728	oscp1a	94	65.517	ENSTGUG00000001602	-	95	65.517	Taeniopygia_guttata
ENSACLG00000004728	oscp1a	96	79.661	ENSTRUG00000010531	oscp1a	95	79.661	Takifugu_rubripes
ENSACLG00000004728	oscp1a	95	66.667	ENSTBEG00000016674	LSM10	95	66.667	Tupaia_belangeri
ENSACLG00000004728	oscp1a	96	67.797	ENSUAMG00000020265	LSM10	96	67.797	Ursus_americanus
ENSACLG00000004728	oscp1a	96	67.797	ENSUMAG00000001438	LSM10	54	67.797	Ursus_maritimus
ENSACLG00000004728	oscp1a	96	67.797	ENSVVUG00000023209	LSM10	96	67.797	Vulpes_vulpes
ENSACLG00000004728	oscp1a	96	63.559	ENSXETG00000027631	lsm10	96	63.559	Xenopus_tropicalis
ENSACLG00000004728	oscp1a	96	68.644	ENSXCOG00000018776	oscp1a	74	68.644	Xiphophorus_couchianus
ENSACLG00000004728	oscp1a	91	70.536	ENSXMAG00000019963	oscp1a	90	70.536	Xiphophorus_maculatus