EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000004742 (Gene tree)
Gene ID: 113024504
Gene Symbol: parn
Alias: zgc:56067
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 9904 bases
Position: chr6:30985675-30995578
Accession: 113024504
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000007013	RNA_bind	PF08675.11	1.4e-33	1	1
ENSACLP00000007013	CAF1	PF04857.20	4.4e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000007170	-	2214	-	ENSACLP00000007013	677 (aa)	XP_026027435	UPI000E4263C5

Gene Model

Click here to download ENSACLG00000004742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000004742's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000004742	parn	84	74.872	ENSG00000140694	PARN	99	70.383	Homo_sapiens
ENSACLG00000004742	parn	79	78.879	ENSAMEG00000011208	PARN	83	78.879	Ailuropoda_melanoleuca
ENSACLG00000004742	parn	87	85.446	ENSACIG00000000619	parn	99	85.446	Amphilophus_citrinellus
ENSACLG00000004742	parn	100	88.484	ENSAOCG00000003465	parn	100	88.921	Amphiprion_ocellaris
ENSACLG00000004742	parn	72	94.274	ENSAPEG00000010661	parn	94	94.274	Amphiprion_percula
ENSACLG00000004742	parn	100	90.205	ENSATEG00000004661	parn	100	90.205	Anabas_testudineus
ENSACLG00000004742	parn	83	73.966	ENSAPLG00000013914	PARN	91	74.483	Anas_platyrhynchos
ENSACLG00000004742	parn	84	74.744	ENSACAG00000004973	PARN	90	74.068	Anolis_carolinensis
ENSACLG00000004742	parn	85	73.862	ENSANAG00000031516	PARN	94	77.966	Aotus_nancymaae
ENSACLG00000004742	parn	100	72.312	ENSAMXG00000012390	parn	96	76.382	Astyanax_mexicanus
ENSACLG00000004742	parn	84	71.404	ENSBTAG00000018097	PARN	90	73.996	Bos_taurus
ENSACLG00000004742	parn	85	74.199	ENSCJAG00000015866	PARN	94	77.966	Callithrix_jacchus
ENSACLG00000004742	parn	83	74.266	ENSCAFG00000018795	PARN	90	74.266	Canis_familiaris
ENSACLG00000004742	parn	83	74.611	ENSCAFG00020024126	PARN	90	74.611	Canis_lupus_dingo
ENSACLG00000004742	parn	84	74.315	ENSCHIG00000018143	PARN	91	74.315	Capra_hircus
ENSACLG00000004742	parn	69	51.351	ENSCAPG00000007984	PARN	78	51.351	Cavia_aperea
ENSACLG00000004742	parn	84	73.801	ENSCPOG00000002263	PARN	91	73.801	Cavia_porcellus
ENSACLG00000004742	parn	85	74.199	ENSCCAG00000030367	PARN	94	77.966	Cebus_capucinus
ENSACLG00000004742	parn	51	32.414	ENSCATG00000033196	PNLDC1	72	32.414	Cercocebus_atys
ENSACLG00000004742	parn	79	79.401	ENSCATG00000041368	PARN	95	79.401	Cercocebus_atys
ENSACLG00000004742	parn	85	73.064	ENSCLAG00000015406	PARN	92	73.096	Chinchilla_lanigera
ENSACLG00000004742	parn	85	74.199	ENSCSAG00000008142	PARN	92	74.199	Chlorocebus_sabaeus
ENSACLG00000004742	parn	83	58.031	ENSCHOG00000007014	PARN	91	58.031	Choloepus_hoffmanni
ENSACLG00000004742	parn	75	75.191	ENSCPBG00000006609	PARN	90	75.191	Chrysemys_picta_bellii
ENSACLG00000004742	parn	76	42.322	ENSCING00000010142	-	99	42.322	Ciona_intestinalis
ENSACLG00000004742	parn	85	63.218	ENSCANG00000028849	-	89	77.966	Colobus_angolensis_palliatus
ENSACLG00000004742	parn	84	74.093	ENSCGRG00001012096	Parn	91	74.093	Cricetulus_griseus_chok1gshd
ENSACLG00000004742	parn	84	74.093	ENSCGRG00000004939	Parn	91	74.093	Cricetulus_griseus_crigri
ENSACLG00000004742	parn	100	82.703	ENSCSEG00000002064	parn	100	82.533	Cynoglossus_semilaevis
ENSACLG00000004742	parn	100	85.380	ENSCVAG00000014848	parn	100	84.649	Cyprinodon_variegatus
ENSACLG00000004742	parn	100	67.394	ENSDARG00000102634	parn	100	67.249	Danio_rerio
ENSACLG00000004742	parn	84	74.446	ENSDNOG00000000833	PARN	94	79.213	Dasypus_novemcinctus
ENSACLG00000004742	parn	62	75.758	ENSETEG00000014828	-	69	75.758	Echinops_telfairi
ENSACLG00000004742	parn	100	64.861	ENSEASG00005011400	PARN	100	65.243	Equus_asinus_asinus
ENSACLG00000004742	parn	100	64.714	ENSECAG00000017792	PARN	100	65.096	Equus_caballus
ENSACLG00000004742	parn	71	63.964	ENSEEUG00000010370	PARN	78	63.964	Erinaceus_europaeus
ENSACLG00000004742	parn	100	75.687	ENSELUG00000013139	parn	90	75.977	Esox_lucius
ENSACLG00000004742	parn	79	79.401	ENSFCAG00000044961	PARN	90	74.443	Felis_catus
ENSACLG00000004742	parn	84	73.756	ENSFALG00000003911	PARN	90	74.271	Ficedula_albicollis
ENSACLG00000004742	parn	82	74.600	ENSFDAG00000009234	PARN	90	74.564	Fukomys_damarensis
ENSACLG00000004742	parn	88	81.879	ENSFHEG00000013738	parn	92	91.525	Fundulus_heteroclitus
ENSACLG00000004742	parn	81	85.455	ENSGMOG00000003231	parn	99	85.091	Gadus_morhua
ENSACLG00000004742	parn	84	73.973	ENSGALG00000003091	PARN	92	74.315	Gallus_gallus
ENSACLG00000004742	parn	100	84.840	ENSGAFG00000011061	parn	100	84.111	Gambusia_affinis
ENSACLG00000004742	parn	100	77.068	ENSGACG00000019501	parn	100	77.358	Gasterosteus_aculeatus
ENSACLG00000004742	parn	84	74.872	ENSGGOG00000025224	PARN	91	77.966	Gorilla_gorilla
ENSACLG00000004742	parn	100	99.558	ENSHBUG00000017906	parn	100	99.558	Haplochromis_burtoni
ENSACLG00000004742	parn	84	73.459	ENSHGLG00000010886	PARN	91	73.459	Heterocephalus_glaber_female
ENSACLG00000004742	parn	84	73.459	ENSHGLG00100014659	PARN	91	73.459	Heterocephalus_glaber_male
ENSACLG00000004742	parn	80	84.066	ENSHCOG00000008683	parn	94	84.066	Hippocampus_comes
ENSACLG00000004742	parn	100	61.933	ENSIPUG00000012401	parn	100	61.842	Ictalurus_punctatus
ENSACLG00000004742	parn	83	73.748	ENSSTOG00000007519	PARN	91	73.529	Ictidomys_tridecemlineatus
ENSACLG00000004742	parn	84	74.346	ENSJJAG00000023049	Parn	91	74.346	Jaculus_jaculus
ENSACLG00000004742	parn	100	86.404	ENSKMAG00000009462	parn	100	86.404	Kryptolebias_marmoratus
ENSACLG00000004742	parn	93	88.871	ENSLBEG00000009167	parn	100	88.558	Labrus_bergylta
ENSACLG00000004742	parn	74	76.389	ENSLACG00000004207	PARN	100	75.708	Latimeria_chalumnae
ENSACLG00000004742	parn	100	72.595	ENSLOCG00000000715	parn	100	72.635	Lepisosteus_oculatus
ENSACLG00000004742	parn	85	74.530	ENSLAFG00000015036	PARN	92	74.530	Loxodonta_africana
ENSACLG00000004742	parn	85	70.995	ENSMFAG00000044852	PARN	89	77.966	Macaca_fascicularis
ENSACLG00000004742	parn	85	74.199	ENSMMUG00000018849	PARN	89	77.966	Macaca_mulatta
ENSACLG00000004742	parn	85	74.199	ENSMNEG00000045108	PARN	89	77.966	Macaca_nemestrina
ENSACLG00000004742	parn	85	74.030	ENSMLEG00000031743	PARN	89	77.966	Mandrillus_leucophaeus
ENSACLG00000004742	parn	100	89.229	ENSMAMG00000006939	parn	100	89.229	Mastacembelus_armatus
ENSACLG00000004742	parn	100	99.852	ENSMZEG00005013590	parn	100	99.852	Maylandia_zebra
ENSACLG00000004742	parn	83	72.396	ENSMGAG00000001004	PARN	90	72.396	Meleagris_gallopavo
ENSACLG00000004742	parn	84	69.165	ENSMAUG00000008025	Parn	91	69.165	Mesocricetus_auratus
ENSACLG00000004742	parn	84	74.486	ENSMICG00000016053	PARN	91	76.271	Microcebus_murinus
ENSACLG00000004742	parn	73	79.192	ENSMOCG00000022211	Parn	100	79.192	Microtus_ochrogaster
ENSACLG00000004742	parn	81	88.768	ENSMMOG00000011333	parn	90	88.768	Mola_mola
ENSACLG00000004742	parn	73	81.087	ENSMODG00000004915	PARN	99	81.087	Monodelphis_domestica
ENSACLG00000004742	parn	96	88.889	ENSMALG00000019426	parn	94	93.863	Monopterus_albus
ENSACLG00000004742	parn	84	72.414	MGP_CAROLIEiJ_G0020466	Parn	91	72.414	Mus_caroli
ENSACLG00000004742	parn	84	72.318	ENSMUSG00000022685	Parn	100	75.610	Mus_musculus
ENSACLG00000004742	parn	84	73.010	MGP_PahariEiJ_G0016172	Parn	91	73.010	Mus_pahari
ENSACLG00000004742	parn	84	72.260	MGP_SPRETEiJ_G0021361	Parn	92	72.137	Mus_spretus
ENSACLG00000004742	parn	83	74.740	ENSMPUG00000014464	PARN	90	74.740	Mustela_putorius_furo
ENSACLG00000004742	parn	73	78.586	ENSMLUG00000005414	PARN	100	78.586	Myotis_lucifugus
ENSACLG00000004742	parn	81	95.455	ENSNBRG00000006805	parn	93	95.455	Neolamprologus_brichardi
ENSACLG00000004742	parn	84	74.701	ENSNLEG00000010241	PARN	91	77.966	Nomascus_leucogenys
ENSACLG00000004742	parn	69	65.000	ENSMEUG00000008178	-	74	65.000	Notamacropus_eugenii
ENSACLG00000004742	parn	83	69.191	ENSOPRG00000012187	PARN	92	69.191	Ochotona_princeps
ENSACLG00000004742	parn	85	68.284	ENSODEG00000001617	PARN	92	68.284	Octodon_degus
ENSACLG00000004742	parn	100	98.527	ENSONIG00000000151	parn	100	98.527	Oreochromis_niloticus
ENSACLG00000004742	parn	83	74.655	ENSOCUG00000000322	PARN	91	74.913	Oryctolagus_cuniculus
ENSACLG00000004742	parn	100	81.525	ENSORLG00020010313	parn	100	81.471	Oryzias_latipes_hni
ENSACLG00000004742	parn	100	81.232	ENSORLG00015000300	parn	100	81.176	Oryzias_latipes_hsok
ENSACLG00000004742	parn	100	80.234	ENSOMEG00000019555	parn	100	80.088	Oryzias_melastigma
ENSACLG00000004742	parn	73	79.032	ENSOGAG00000014626	PARN	100	79.032	Otolemur_garnettii
ENSACLG00000004742	parn	73	80.000	ENSOARG00000007574	PARN	100	80.000	Ovis_aries
ENSACLG00000004742	parn	84	74.701	ENSPPAG00000031438	PARN	91	77.966	Pan_paniscus
ENSACLG00000004742	parn	79	79.401	ENSPPRG00000018583	PARN	90	74.443	Panthera_pardus
ENSACLG00000004742	parn	79	79.401	ENSPTIG00000012135	PARN	90	74.443	Panthera_tigris_altaica
ENSACLG00000004742	parn	84	74.701	ENSPTRG00000007792	PARN	91	77.966	Pan_troglodytes
ENSACLG00000004742	parn	85	72.007	ENSPANG00000020099	PARN	89	77.966	Papio_anubis
ENSACLG00000004742	parn	99	70.672	ENSPKIG00000022807	parn	90	76.256	Paramormyrops_kingsleyae
ENSACLG00000004742	parn	84	74.872	ENSPSIG00000014804	PARN	91	74.872	Pelodiscus_sinensis
ENSACLG00000004742	parn	90	79.739	ENSPMGG00000014431	parn	85	80.065	Periophthalmus_magnuspinnatus
ENSACLG00000004742	parn	84	71.626	ENSPEMG00000018439	Parn	91	71.626	Peromyscus_maniculatus_bairdii
ENSACLG00000004742	parn	76	69.171	ENSPMAG00000003956	parn	98	69.171	Petromyzon_marinus
ENSACLG00000004742	parn	62	72.664	ENSPCIG00000001259	PARN	91	77.966	Phascolarctos_cinereus
ENSACLG00000004742	parn	100	85.109	ENSPFOG00000012823	parn	100	84.672	Poecilia_formosa
ENSACLG00000004742	parn	100	85.255	ENSPLAG00000006395	parn	100	84.818	Poecilia_latipinna
ENSACLG00000004742	parn	100	85.255	ENSPMEG00000007711	parn	100	84.818	Poecilia_mexicana
ENSACLG00000004742	parn	100	85.255	ENSPREG00000000147	parn	100	84.818	Poecilia_reticulata
ENSACLG00000004742	parn	84	74.276	ENSPPYG00000007123	PARN	91	74.276	Pongo_abelii
ENSACLG00000004742	parn	80	64.158	ENSPCAG00000001741	PARN	92	64.158	Procavia_capensis
ENSACLG00000004742	parn	84	71.870	ENSPCOG00000019292	PARN	98	76.271	Propithecus_coquereli
ENSACLG00000004742	parn	83	71.304	ENSPVAG00000002547	PARN	91	71.304	Pteropus_vampyrus
ENSACLG00000004742	parn	100	99.116	ENSPNYG00000006835	parn	100	99.116	Pundamilia_nyererei
ENSACLG00000004742	parn	93	72.370	ENSPNAG00000018905	parn	100	72.370	Pygocentrus_nattereri
ENSACLG00000004742	parn	84	73.702	ENSRNOG00000002912	Parn	96	79.592	Rattus_norvegicus
ENSACLG00000004742	parn	85	72.513	ENSSBOG00000034726	PARN	94	77.966	Saimiri_boliviensis_boliviensis
ENSACLG00000004742	parn	62	79.665	ENSSHAG00000008493	PARN	93	79.665	Sarcophilus_harrisii
ENSACLG00000004742	parn	100	70.899	ENSSFOG00015014165	parn	98	76.007	Scleropages_formosus
ENSACLG00000004742	parn	100	83.548	ENSSMAG00000000685	parn	100	84.120	Scophthalmus_maximus
ENSACLG00000004742	parn	100	90.102	ENSSDUG00000014555	parn	100	89.811	Seriola_dumerili
ENSACLG00000004742	parn	64	81.149	ENSSARG00000014339	PARN	75	81.149	Sorex_araneus
ENSACLG00000004742	parn	84	75.000	ENSSPUG00000007719	PARN	91	75.000	Sphenodon_punctatus
ENSACLG00000004742	parn	100	89.443	ENSSPAG00000007095	parn	100	89.443	Stegastes_partitus
ENSACLG00000004742	parn	83	74.394	ENSSSCG00000007878	PARN	80	74.394	Sus_scrofa
ENSACLG00000004742	parn	84	73.630	ENSTGUG00000004971	PARN	91	74.144	Taeniopygia_guttata
ENSACLG00000004742	parn	100	77.924	ENSTNIG00000008252	parn	100	78.509	Tetraodon_nigroviridis
ENSACLG00000004742	parn	75	62.928	ENSTBEG00000010407	PARN	90	62.928	Tupaia_belangeri
ENSACLG00000004742	parn	83	69.655	ENSTTRG00000002843	PARN	91	69.655	Tursiops_truncatus
ENSACLG00000004742	parn	72	65.779	ENSUAMG00000008283	PARN	100	65.779	Ursus_americanus
ENSACLG00000004742	parn	82	75.130	ENSUMAG00000004527	PARN	89	75.130	Ursus_maritimus
ENSACLG00000004742	parn	83	71.034	ENSVPAG00000008968	PARN	93	71.034	Vicugna_pacos
ENSACLG00000004742	parn	83	74.611	ENSVVUG00000019509	PARN	90	74.611	Vulpes_vulpes
ENSACLG00000004742	parn	84	71.502	ENSXETG00000010994	parn	100	76.894	Xenopus_tropicalis
ENSACLG00000004742	parn	87	84.007	ENSXCOG00000015990	parn	99	83.838	Xiphophorus_couchianus
ENSACLG00000004742	parn	100	83.772	ENSXMAG00000014783	parn	100	83.626	Xiphophorus_maculatus