EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000005090 (Gene tree)
Gene ID: 113016703
Gene Symbol: si:ch73-63e15.2
Alias: si:dkey-19f23.4
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 43930 bases
Position: chr23:5661913-5705842
Accession: 113016703
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000007586	ResIII	PF04851.15	6.6e-07	1	1
ENSACLP00000007528	ResIII	PF04851.15	7.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000007756	-	4775	-	ENSACLP00000007586	1551 (aa)	XP_026015533	UPI000E4129CD
ENSACLT00000007694	-	4862	-	ENSACLP00000007528	1580 (aa)	XP_026015528	UPI000E3FAD0D

Gene Model

Click here to download ENSACLG00000005090's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000005090's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000005090	si:ch73-63e15.2	61	63.532	ENSACLG00000024913	sbno1	73	63.532

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000005090	si:ch73-63e15.2	77	64.776	ENSG00000064932	SBNO2	87	68.750	Homo_sapiens
ENSACLG00000005090	si:ch73-63e15.2	100	82.214	ENSAPOG00000003185	si:ch73-63e15.2	100	82.039	Acanthochromis_polyacanthus
ENSACLG00000005090	si:ch73-63e15.2	100	82.078	ENSAOCG00000016581	si:ch73-63e15.2	99	83.211	Amphiprion_ocellaris
ENSACLG00000005090	si:ch73-63e15.2	100	81.954	ENSAPEG00000008862	si:ch73-63e15.2	99	83.078	Amphiprion_percula
ENSACLG00000005090	si:ch73-63e15.2	100	77.421	ENSATEG00000023838	si:ch73-63e15.2	99	84.314	Anabas_testudineus
ENSACLG00000005090	si:ch73-63e15.2	72	71.502	ENSAPLG00000007158	SBNO2	90	71.245	Anas_platyrhynchos
ENSACLG00000005090	si:ch73-63e15.2	78	65.127	ENSANAG00000026685	SBNO2	88	68.517	Aotus_nancymaae
ENSACLG00000005090	si:ch73-63e15.2	80	76.000	ENSAMXG00000018868	sbno2a	96	79.360	Astyanax_mexicanus
ENSACLG00000005090	si:ch73-63e15.2	87	71.725	ENSAMXG00000015881	si:ch73-63e15.2	88	77.521	Astyanax_mexicanus
ENSACLG00000005090	si:ch73-63e15.2	78	65.504	ENSBTAG00000020780	SBNO2	89	68.305	Bos_taurus
ENSACLG00000005090	si:ch73-63e15.2	72	69.749	ENSCAFG00000019543	SBNO2	83	69.490	Canis_familiaris
ENSACLG00000005090	si:ch73-63e15.2	72	69.749	ENSCAFG00020017115	SBNO2	88	69.490	Canis_lupus_dingo
ENSACLG00000005090	si:ch73-63e15.2	78	65.193	ENSCHIG00000026127	SBNO2	86	69.151	Capra_hircus
ENSACLG00000005090	si:ch73-63e15.2	71	66.871	ENSCAPG00000005731	SBNO2	94	66.608	Cavia_aperea
ENSACLG00000005090	si:ch73-63e15.2	72	66.551	ENSCPOG00000007477	SBNO2	86	66.522	Cavia_porcellus
ENSACLG00000005090	si:ch73-63e15.2	72	68.076	ENSCCAG00000037518	SBNO2	89	67.931	Cebus_capucinus
ENSACLG00000005090	si:ch73-63e15.2	77	65.044	ENSCATG00000037046	SBNO2	87	68.924	Cercocebus_atys
ENSACLG00000005090	si:ch73-63e15.2	71	69.048	ENSCLAG00000010178	SBNO2	98	68.914	Chinchilla_lanigera
ENSACLG00000005090	si:ch73-63e15.2	72	68.772	ENSCSAG00000012317	SBNO2	84	68.772	Chlorocebus_sabaeus
ENSACLG00000005090	si:ch73-63e15.2	72	70.665	ENSCPBG00000008920	SBNO2	80	82.432	Chrysemys_picta_bellii
ENSACLG00000005090	si:ch73-63e15.2	74	64.701	ENSCANG00000036745	SBNO2	95	68.722	Colobus_angolensis_palliatus
ENSACLG00000005090	si:ch73-63e15.2	71	66.784	ENSCGRG00001023960	Sbno2	89	64.686	Cricetulus_griseus_chok1gshd
ENSACLG00000005090	si:ch73-63e15.2	71	68.827	ENSCGRG00000011984	Sbno2	89	66.117	Cricetulus_griseus_crigri
ENSACLG00000005090	si:ch73-63e15.2	75	83.165	ENSCSEG00000006856	si:ch73-63e15.2	96	86.347	Cynoglossus_semilaevis
ENSACLG00000005090	si:ch73-63e15.2	100	76.856	ENSCVAG00000005663	si:ch73-63e15.2	100	76.600	Cyprinodon_variegatus
ENSACLG00000005090	si:ch73-63e15.2	88	71.043	ENSDARG00000016188	SBNO2	85	78.894	Danio_rerio
ENSACLG00000005090	si:ch73-63e15.2	81	74.134	ENSDARG00000098801	sbno2a	94	74.519	Danio_rerio
ENSACLG00000005090	si:ch73-63e15.2	72	69.064	ENSDORG00000002916	Sbno2	85	69.050	Dipodomys_ordii
ENSACLG00000005090	si:ch73-63e15.2	78	65.262	ENSEASG00005021621	SBNO2	88	69.070	Equus_asinus_asinus
ENSACLG00000005090	si:ch73-63e15.2	78	64.944	ENSECAG00000011827	SBNO2	88	69.157	Equus_caballus
ENSACLG00000005090	si:ch73-63e15.2	100	72.334	ENSELUG00000020457	si:ch73-63e15.2	100	72.023	Esox_lucius
ENSACLG00000005090	si:ch73-63e15.2	79	67.085	ENSFALG00000013988	SBNO2	90	66.875	Ficedula_albicollis
ENSACLG00000005090	si:ch73-63e15.2	70	66.844	ENSFDAG00000015186	SBNO2	86	67.049	Fukomys_damarensis
ENSACLG00000005090	si:ch73-63e15.2	100	77.150	ENSFHEG00000022262	si:ch73-63e15.2	100	77.150	Fundulus_heteroclitus
ENSACLG00000005090	si:ch73-63e15.2	72	86.496	ENSGMOG00000007542	si:ch73-63e15.2	95	86.496	Gadus_morhua
ENSACLG00000005090	si:ch73-63e15.2	79	67.415	ENSGALG00000037522	SBNO2	84	71.760	Gallus_gallus
ENSACLG00000005090	si:ch73-63e15.2	79	86.737	ENSGAFG00000004860	si:ch73-63e15.2	93	86.737	Gambusia_affinis
ENSACLG00000005090	si:ch73-63e15.2	72	87.391	ENSGACG00000013190	si:ch73-63e15.2	96	86.781	Gasterosteus_aculeatus
ENSACLG00000005090	si:ch73-63e15.2	88	62.596	ENSGAGG00000008348	SBNO2	89	69.625	Gopherus_agassizii
ENSACLG00000005090	si:ch73-63e15.2	100	99.420	ENSHBUG00000010742	si:ch73-63e15.2	100	99.420	Haplochromis_burtoni
ENSACLG00000005090	si:ch73-63e15.2	72	68.485	ENSHGLG00000008739	SBNO2	85	68.335	Heterocephalus_glaber_female
ENSACLG00000005090	si:ch73-63e15.2	72	67.848	ENSHGLG00100005269	SBNO2	98	68.788	Heterocephalus_glaber_male
ENSACLG00000005090	si:ch73-63e15.2	81	80.900	ENSHCOG00000000884	si:ch73-63e15.2	95	80.000	Hippocampus_comes
ENSACLG00000005090	si:ch73-63e15.2	80	76.410	ENSIPUG00000000537	si:ch73-63e15.2	92	75.968	Ictalurus_punctatus
ENSACLG00000005090	si:ch73-63e15.2	99	64.764	ENSIPUG00000019672	sbno2	99	75.749	Ictalurus_punctatus
ENSACLG00000005090	si:ch73-63e15.2	78	65.308	ENSSTOG00000025832	SBNO2	91	65.335	Ictidomys_tridecemlineatus
ENSACLG00000005090	si:ch73-63e15.2	78	62.679	ENSJJAG00000017397	Sbno2	91	62.629	Jaculus_jaculus
ENSACLG00000005090	si:ch73-63e15.2	100	77.256	ENSKMAG00000005541	si:ch73-63e15.2	100	77.704	Kryptolebias_marmoratus
ENSACLG00000005090	si:ch73-63e15.2	94	77.938	ENSLBEG00000025016	si:ch73-63e15.2	99	86.892	Labrus_bergylta
ENSACLG00000005090	si:ch73-63e15.2	90	73.096	ENSLOCG00000004643	si:ch73-63e15.2	85	83.463	Lepisosteus_oculatus
ENSACLG00000005090	si:ch73-63e15.2	72	64.533	ENSLAFG00000008824	SBNO2	89	65.297	Loxodonta_africana
ENSACLG00000005090	si:ch73-63e15.2	77	63.477	ENSMFAG00000040030	SBNO2	89	67.216	Macaca_fascicularis
ENSACLG00000005090	si:ch73-63e15.2	77	64.964	ENSMMUG00000010886	SBNO2	88	67.068	Macaca_mulatta
ENSACLG00000005090	si:ch73-63e15.2	77	64.884	ENSMNEG00000039927	SBNO2	87	68.750	Macaca_nemestrina
ENSACLG00000005090	si:ch73-63e15.2	71	65.262	ENSMLEG00000038556	SBNO2	98	65.262	Mandrillus_leucophaeus
ENSACLG00000005090	si:ch73-63e15.2	100	78.782	ENSMAMG00000018758	si:ch73-63e15.2	99	79.789	Mastacembelus_armatus
ENSACLG00000005090	si:ch73-63e15.2	100	99.871	ENSMZEG00005010682	si:ch73-63e15.2	100	99.871	Maylandia_zebra
ENSACLG00000005090	si:ch73-63e15.2	71	71.799	ENSMGAG00000003801	SBNO2	89	71.540	Meleagris_gallopavo
ENSACLG00000005090	si:ch73-63e15.2	72	67.612	ENSMAUG00000008034	Sbno2	86	68.155	Mesocricetus_auratus
ENSACLG00000005090	si:ch73-63e15.2	78	64.753	ENSMICG00000013071	SBNO2	88	68.083	Microcebus_murinus
ENSACLG00000005090	si:ch73-63e15.2	75	66.612	ENSMOCG00000010504	Sbno2	89	66.445	Microtus_ochrogaster
ENSACLG00000005090	si:ch73-63e15.2	78	66.719	ENSMODG00000005382	SBNO2	89	66.484	Monodelphis_domestica
ENSACLG00000005090	si:ch73-63e15.2	62	83.460	ENSMALG00000021831	si:ch73-63e15.2	99	83.460	Monopterus_albus
ENSACLG00000005090	si:ch73-63e15.2	75	66.391	ENSMUSG00000035673	Sbno2	97	66.500	Mus_musculus
ENSACLG00000005090	si:ch73-63e15.2	75	66.529	MGP_PahariEiJ_G0030976	Sbno2	89	66.417	Mus_pahari
ENSACLG00000005090	si:ch73-63e15.2	75	66.529	MGP_SPRETEiJ_G0016381	Sbno2	95	66.417	Mus_spretus
ENSACLG00000005090	si:ch73-63e15.2	67	66.789	ENSMPUG00000008747	SBNO2	99	66.697	Mustela_putorius_furo
ENSACLG00000005090	si:ch73-63e15.2	75	65.896	ENSNGAG00000004308	Sbno2	90	65.731	Nannospalax_galili
ENSACLG00000005090	si:ch73-63e15.2	77	98.319	ENSNBRG00000022968	si:ch73-63e15.2	99	100.000	Neolamprologus_brichardi
ENSACLG00000005090	si:ch73-63e15.2	73	68.794	ENSNLEG00000001305	SBNO2	89	68.794	Nomascus_leucogenys
ENSACLG00000005090	si:ch73-63e15.2	60	67.091	ENSMEUG00000013511	-	78	66.773	Notamacropus_eugenii
ENSACLG00000005090	si:ch73-63e15.2	71	68.198	ENSOPRG00000017238	SBNO2	93	68.844	Ochotona_princeps
ENSACLG00000005090	si:ch73-63e15.2	72	67.070	ENSODEG00000011822	SBNO2	86	66.954	Octodon_degus
ENSACLG00000005090	si:ch73-63e15.2	100	97.785	ENSONIG00000002490	si:ch73-63e15.2	100	97.785	Oreochromis_niloticus
ENSACLG00000005090	si:ch73-63e15.2	100	77.486	ENSORLG00000000913	si:ch73-63e15.2	99	78.050	Oryzias_latipes
ENSACLG00000005090	si:ch73-63e15.2	100	77.834	ENSORLG00020010978	si:ch73-63e15.2	100	77.267	Oryzias_latipes_hni
ENSACLG00000005090	si:ch73-63e15.2	100	77.674	ENSORLG00015000202	si:ch73-63e15.2	100	77.464	Oryzias_latipes_hsok
ENSACLG00000005090	si:ch73-63e15.2	100	77.278	ENSOMEG00000000359	si:ch73-63e15.2	100	76.879	Oryzias_melastigma
ENSACLG00000005090	si:ch73-63e15.2	72	66.436	ENSOARG00000011130	SBNO2	86	66.436	Ovis_aries
ENSACLG00000005090	si:ch73-63e15.2	77	63.946	ENSPPAG00000032482	SBNO2	90	67.814	Pan_paniscus
ENSACLG00000005090	si:ch73-63e15.2	72	68.571	ENSPTRG00000010185	SBNO2	87	68.864	Pan_troglodytes
ENSACLG00000005090	si:ch73-63e15.2	72	65.398	ENSPANG00000009658	SBNO2	87	65.451	Papio_anubis
ENSACLG00000005090	si:ch73-63e15.2	90	79.479	ENSPKIG00000024201	si:ch73-63e15.2	83	82.472	Paramormyrops_kingsleyae
ENSACLG00000005090	si:ch73-63e15.2	65	78.613	ENSPKIG00000009707	-	84	78.732	Paramormyrops_kingsleyae
ENSACLG00000005090	si:ch73-63e15.2	61	73.529	ENSPSIG00000002852	SBNO2	99	73.327	Pelodiscus_sinensis
ENSACLG00000005090	si:ch73-63e15.2	81	78.414	ENSPMGG00000014375	si:ch73-63e15.2	95	78.100	Periophthalmus_magnuspinnatus
ENSACLG00000005090	si:ch73-63e15.2	75	64.760	ENSPEMG00000024122	Sbno2	89	64.262	Peromyscus_maniculatus_bairdii
ENSACLG00000005090	si:ch73-63e15.2	78	67.528	ENSPCIG00000011264	SBNO2	89	67.504	Phascolarctos_cinereus
ENSACLG00000005090	si:ch73-63e15.2	100	76.220	ENSPFOG00000004096	si:ch73-63e15.2	100	85.665	Poecilia_formosa
ENSACLG00000005090	si:ch73-63e15.2	96	76.844	ENSPLAG00000014653	si:ch73-63e15.2	100	76.615	Poecilia_latipinna
ENSACLG00000005090	si:ch73-63e15.2	100	75.899	ENSPMEG00000002129	si:ch73-63e15.2	96	82.621	Poecilia_mexicana
ENSACLG00000005090	si:ch73-63e15.2	100	76.223	ENSPREG00000006755	si:ch73-63e15.2	100	76.067	Poecilia_reticulata
ENSACLG00000005090	si:ch73-63e15.2	68	68.721	ENSPCAG00000012256	SBNO2	79	68.037	Procavia_capensis
ENSACLG00000005090	si:ch73-63e15.2	78	60.016	ENSPCOG00000015216	SBNO2	90	59.888	Propithecus_coquereli
ENSACLG00000005090	si:ch73-63e15.2	100	99.807	ENSPNYG00000019926	si:ch73-63e15.2	100	99.807	Pundamilia_nyererei
ENSACLG00000005090	si:ch73-63e15.2	78	77.162	ENSPNAG00000026609	sbno2a	99	69.261	Pygocentrus_nattereri
ENSACLG00000005090	si:ch73-63e15.2	83	76.039	ENSPNAG00000020260	si:ch73-63e15.2	89	77.635	Pygocentrus_nattereri
ENSACLG00000005090	si:ch73-63e15.2	75	66.722	ENSRNOG00000013987	Sbno2	89	68.636	Rattus_norvegicus
ENSACLG00000005090	si:ch73-63e15.2	66	67.711	ENSRBIG00000009740	SBNO2	86	67.779	Rhinopithecus_bieti
ENSACLG00000005090	si:ch73-63e15.2	63	71.463	ENSRROG00000044671	SBNO2	85	71.463	Rhinopithecus_roxellana
ENSACLG00000005090	si:ch73-63e15.2	77	64.343	ENSSBOG00000023562	SBNO2	88	67.801	Saimiri_boliviensis_boliviensis
ENSACLG00000005090	si:ch73-63e15.2	71	70.757	ENSSHAG00000010241	SBNO2	98	70.496	Sarcophilus_harrisii
ENSACLG00000005090	si:ch73-63e15.2	87	80.158	ENSSFOG00015005861	si:ch73-63e15.2	94	80.601	Scleropages_formosus
ENSACLG00000005090	si:ch73-63e15.2	100	78.401	ENSSMAG00000012489	si:ch73-63e15.2	100	79.115	Scophthalmus_maximus
ENSACLG00000005090	si:ch73-63e15.2	100	80.354	ENSSDUG00000003527	si:ch73-63e15.2	100	80.415	Seriola_dumerili
ENSACLG00000005090	si:ch73-63e15.2	100	80.232	ENSSLDG00000004623	si:ch73-63e15.2	100	80.293	Seriola_lalandi_dorsalis
ENSACLG00000005090	si:ch73-63e15.2	94	81.258	ENSSPAG00000017717	si:ch73-63e15.2	100	81.753	Stegastes_partitus
ENSACLG00000005090	si:ch73-63e15.2	78	64.878	ENSSSCG00000030042	SBNO2	89	68.983	Sus_scrofa
ENSACLG00000005090	si:ch73-63e15.2	70	87.816	ENSTRUG00000018193	si:ch73-63e15.2	86	88.381	Takifugu_rubripes
ENSACLG00000005090	si:ch73-63e15.2	66	69.783	ENSUAMG00000006568	SBNO2	93	70.983	Ursus_americanus
ENSACLG00000005090	si:ch73-63e15.2	72	69.550	ENSVVUG00000022823	SBNO2	82	69.291	Vulpes_vulpes
ENSACLG00000005090	si:ch73-63e15.2	66	74.899	ENSXETG00000021579	sbno2	91	74.239	Xenopus_tropicalis
ENSACLG00000005090	si:ch73-63e15.2	83	87.284	ENSXCOG00000009209	si:ch73-63e15.2	94	89.749	Xiphophorus_couchianus
ENSACLG00000005090	si:ch73-63e15.2	100	76.278	ENSXMAG00000012091	si:ch73-63e15.2	89	88.605	Xiphophorus_maculatus