EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000005138 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 2739 bases
Position: chr6:1506584-1509322
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000007578	RVT_1	PF00078.27	6.8e-25	1	1
ENSACLP00000007578	RNase_H	PF00075.24	3.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000007747	-	2739	-	ENSACLP00000007578	912 (aa)	-	-

Gene Model

Click here to download ENSACLG00000005138's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000005138's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000005138	-	69	33.701	ENSACLG00000023027	-	50	33.333
ENSACLG00000005138	-	99	97.137	ENSACLG00000014318	-	66	97.137
ENSACLG00000005138	-	81	34.653	ENSACLG00000003782	-	52	34.653

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000005138	-	71	34.380	ENSAPEG00000000438	-	69	34.729	Amphiprion_percula
ENSACLG00000005138	-	70	38.281	ENSAMXG00000033060	-	53	37.599	Astyanax_mexicanus
ENSACLG00000005138	-	69	36.916	ENSAMXG00000040526	-	52	37.152	Astyanax_mexicanus
ENSACLG00000005138	-	79	35.417	ENSAMXG00000033455	-	59	35.417	Astyanax_mexicanus
ENSACLG00000005138	-	77	35.894	ENSBTAG00000052165	-	67	35.559	Bos_taurus
ENSACLG00000005138	-	66	45.937	ENSCPBG00000009184	-	63	45.605	Chrysemys_picta_bellii
ENSACLG00000005138	-	70	32.508	ENSCSEG00000013867	-	50	32.288	Cynoglossus_semilaevis
ENSACLG00000005138	-	70	32.508	ENSCSEG00000011566	-	50	32.288	Cynoglossus_semilaevis
ENSACLG00000005138	-	70	32.508	ENSCSEG00000018136	-	50	32.288	Cynoglossus_semilaevis
ENSACLG00000005138	-	70	32.508	ENSCSEG00000009059	-	50	32.288	Cynoglossus_semilaevis
ENSACLG00000005138	-	70	32.508	ENSCSEG00000012922	-	50	32.288	Cynoglossus_semilaevis
ENSACLG00000005138	-	68	36.792	ENSECAG00000034459	-	56	36.581	Equus_caballus
ENSACLG00000005138	-	74	36.536	ENSGALG00000050905	-	68	36.472	Gallus_gallus
ENSACLG00000005138	-	67	37.724	ENSGALG00000053504	-	64	37.500	Gallus_gallus
ENSACLG00000005138	-	75	39.655	ENSLBEG00000013565	-	50	39.857	Labrus_bergylta
ENSACLG00000005138	-	78	38.202	ENSMAMG00000010978	-	51	33.438	Mastacembelus_armatus
ENSACLG00000005138	-	69	39.179	ENSMODG00000029698	-	56	39.246	Monodelphis_domestica
ENSACLG00000005138	-	70	39.286	ENSMODG00000028686	-	85	39.246	Monodelphis_domestica
ENSACLG00000005138	-	69	39.179	ENSMODG00000027641	-	56	39.246	Monodelphis_domestica
ENSACLG00000005138	-	69	39.179	ENSMODG00000028573	-	56	39.246	Monodelphis_domestica
ENSACLG00000005138	-	69	39.021	ENSMODG00000027664	-	83	39.089	Monodelphis_domestica
ENSACLG00000005138	-	71	41.896	ENSMODG00000027661	-	55	41.577	Monodelphis_domestica
ENSACLG00000005138	-	62	39.576	ENSMODG00000029194	-	97	39.576	Monodelphis_domestica
ENSACLG00000005138	-	71	41.743	ENSMODG00000028504	-	71	41.422	Monodelphis_domestica
ENSACLG00000005138	-	68	38.352	ENSMODG00000029740	-	56	38.425	Monodelphis_domestica
ENSACLG00000005138	-	82	39.179	ENSMODG00000027428	-	51	39.246	Monodelphis_domestica
ENSACLG00000005138	-	71	41.896	ENSMODG00000029647	-	81	41.577	Monodelphis_domestica
ENSACLG00000005138	-	69	39.179	ENSMODG00000029316	-	76	39.246	Monodelphis_domestica
ENSACLG00000005138	-	67	39.610	ENSMODG00000028692	-	84	39.677	Monodelphis_domestica
ENSACLG00000005138	-	69	39.336	ENSMODG00000028385	-	56	39.403	Monodelphis_domestica
ENSACLG00000005138	-	69	39.179	ENSMODG00000029722	-	57	39.246	Monodelphis_domestica
ENSACLG00000005138	-	65	39.500	ENSMODG00000028325	-	92	39.500	Monodelphis_domestica
ENSACLG00000005138	-	69	39.179	ENSMODG00000027448	-	78	39.246	Monodelphis_domestica
ENSACLG00000005138	-	65	36.093	ENSONIG00000021274	-	82	35.596	Oreochromis_niloticus
ENSACLG00000005138	-	71	35.000	ENSONIG00000021180	-	53	34.697	Oreochromis_niloticus
ENSACLG00000005138	-	52	40.208	ENSOMEG00000005516	-	53	40.329	Oryzias_melastigma
ENSACLG00000005138	-	67	38.188	ENSOARG00000009849	-	64	38.399	Ovis_aries
ENSACLG00000005138	-	59	37.660	ENSOARG00000001648	-	74	37.570	Ovis_aries
ENSACLG00000005138	-	67	38.188	ENSOARG00000015221	-	72	38.072	Ovis_aries
ENSACLG00000005138	-	67	38.511	ENSOARG00000014856	-	65	38.399	Ovis_aries
ENSACLG00000005138	-	68	39.002	ENSPSIG00000001866	-	56	39.225	Pelodiscus_sinensis
ENSACLG00000005138	-	71	37.216	ENSSSCG00000034853	-	53	37.721	Sus_scrofa
ENSACLG00000005138	-	69	32.390	ENSXMAG00000024544	-	66	32.504	Xiphophorus_maculatus