EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000005158 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 2706 bases
Position: chr20:14384419-14387124
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000007608	RVT_1	PF00078.27	9.5e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000007778	-	2706	-	ENSACLP00000007608	901 (aa)	-	-

Gene Model

Click here to download ENSACLG00000005158's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000005158's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000005158	-	52	31.753	ENSACLG00000008859	-	69	31.753
ENSACLG00000005158	-	53	31.458	ENSACLG00000007954	-	70	31.458
ENSACLG00000005158	-	52	30.193	ENSACLG00000000579	-	71	30.193
ENSACLG00000005158	-	52	31.702	ENSACLG00000005489	-	70	31.667
ENSACLG00000005158	-	52	32.371	ENSACLG00000000736	-	66	32.371
ENSACLG00000005158	-	57	30.268	ENSACLG00000007200	-	73	30.326
ENSACLG00000005158	-	52	30.508	ENSACLG00000020849	-	71	30.508
ENSACLG00000005158	-	57	30.843	ENSACLG00000001858	-	72	30.843
ENSACLG00000005158	-	52	30.720	ENSACLG00000027577	-	76	30.720
ENSACLG00000005158	-	53	31.911	ENSACLG00000006988	-	70	31.911
ENSACLG00000005158	-	55	31.008	ENSACLG00000015704	-	82	31.008

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000005158	-	67	43.212	ENSAMXG00000030359	-	86	43.140	Astyanax_mexicanus
ENSACLG00000005158	-	80	45.455	ENSELUG00000010493	-	99	45.317	Esox_lucius
ENSACLG00000005158	-	50	30.851	ENSMAMG00000005648	-	68	30.261	Mastacembelus_armatus
ENSACLG00000005158	-	50	30.065	ENSMZEG00005006174	-	96	30.065	Maylandia_zebra
ENSACLG00000005158	-	52	32.353	ENSORLG00000025095	-	62	32.353	Oryzias_latipes
ENSACLG00000005158	-	66	30.629	ENSORLG00000025570	-	91	30.283	Oryzias_latipes
ENSACLG00000005158	-	52	30.146	ENSORLG00000022342	-	70	30.672	Oryzias_latipes
ENSACLG00000005158	-	65	47.089	ENSORLG00000026699	-	75	47.089	Oryzias_latipes
ENSACLG00000005158	-	52	30.021	ENSORLG00000024245	-	86	30.544	Oryzias_latipes
ENSACLG00000005158	-	52	30.146	ENSORLG00000024475	-	67	30.672	Oryzias_latipes
ENSACLG00000005158	-	52	30.353	ENSORLG00000023505	-	66	30.321	Oryzias_latipes
ENSACLG00000005158	-	52	30.228	ENSORLG00000028549	-	67	30.753	Oryzias_latipes
ENSACLG00000005158	-	90	46.116	ENSORLG00000025871	-	66	45.993	Oryzias_latipes
ENSACLG00000005158	-	51	49.677	ENSORLG00000025964	-	71	49.677	Oryzias_latipes
ENSACLG00000005158	-	90	43.966	ENSORLG00020009374	-	80	43.966	Oryzias_latipes_hni
ENSACLG00000005158	-	71	30.677	ENSORLG00020016931	-	89	30.677	Oryzias_latipes_hni
ENSACLG00000005158	-	74	47.519	ENSORLG00020022681	-	78	47.519	Oryzias_latipes_hni
ENSACLG00000005158	-	52	30.228	ENSORLG00020019488	-	67	30.753	Oryzias_latipes_hni
ENSACLG00000005158	-	52	30.146	ENSORLG00015016729	-	71	30.120	Oryzias_latipes_hsok
ENSACLG00000005158	-	64	30.653	ENSORLG00015018882	-	92	30.653	Oryzias_latipes_hsok
ENSACLG00000005158	-	97	40.894	ENSOMEG00000017142	-	50	41.533	Oryzias_melastigma
ENSACLG00000005158	-	50	33.684	ENSOMEG00000023554	-	71	33.333	Oryzias_melastigma
ENSACLG00000005158	-	64	30.756	ENSPMEG00000019493	-	99	30.756	Poecilia_mexicana
ENSACLG00000005158	-	76	32.203	ENSXMAG00000022354	-	97	31.631	Xiphophorus_maculatus