EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000005172 (Gene tree)
Gene ID: 113009392
Gene Symbol: zgc:171480
Alias: -
Full Name: mitochondrial ribosomal protein L55
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 3784 bases
Position: chr17:15310757-15314540
Accession: 113009392
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000007621	Mitoc_L55	PF09776.9	5.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000007791	-	2500	-	ENSACLP00000007621	138 (aa)	XP_026003446	UPI0003BC93E2

Gene Model

Click here to download ENSACLG00000005172's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000005172's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000005172	zgc:171480	98	63.889	ENSAPOG00000002881	zgc:171480	100	63.889	Acanthochromis_polyacanthus
ENSACLG00000005172	zgc:171480	100	82.609	ENSACIG00000001646	zgc:171480	99	82.609	Amphilophus_citrinellus
ENSACLG00000005172	zgc:171480	98	66.667	ENSAOCG00000016155	zgc:171480	100	66.667	Amphiprion_ocellaris
ENSACLG00000005172	zgc:171480	98	66.667	ENSAPEG00000022327	zgc:171480	100	66.667	Amphiprion_percula
ENSACLG00000005172	zgc:171480	99	63.014	ENSATEG00000005625	zgc:171480	99	63.014	Anabas_testudineus
ENSACLG00000005172	zgc:171480	86	55.000	ENSACAG00000006897	-	90	55.000	Anolis_carolinensis
ENSACLG00000005172	zgc:171480	74	64.706	ENSAMXG00000043839	zgc:171480	78	64.706	Astyanax_mexicanus
ENSACLG00000005172	zgc:171480	72	59.406	ENSCPBG00000001771	-	80	59.406	Chrysemys_picta_bellii
ENSACLG00000005172	zgc:171480	99	52.817	ENSCSEG00000019533	zgc:171480	98	52.817	Cynoglossus_semilaevis
ENSACLG00000005172	zgc:171480	85	55.932	ENSDARG00000043402	zgc:171480	87	55.932	Danio_rerio
ENSACLG00000005172	zgc:171480	74	57.282	ENSELUG00000007716	zgc:171480	79	57.282	Esox_lucius
ENSACLG00000005172	zgc:171480	66	49.451	ENSFALG00000001083	-	94	49.451	Ficedula_albicollis
ENSACLG00000005172	zgc:171480	75	70.874	ENSFHEG00000000203	zgc:171480	76	69.524	Fundulus_heteroclitus
ENSACLG00000005172	zgc:171480	73	68.317	ENSGMOG00000019009	zgc:171480	99	68.317	Gadus_morhua
ENSACLG00000005172	zgc:171480	75	46.602	ENSGALG00000038820	-	90	48.571	Gallus_gallus
ENSACLG00000005172	zgc:171480	89	60.938	ENSGAFG00000004832	-	89	60.938	Gambusia_affinis
ENSACLG00000005172	zgc:171480	67	77.174	ENSGACG00000002136	zgc:171480	100	77.174	Gasterosteus_aculeatus
ENSACLG00000005172	zgc:171480	72	55.000	ENSGAGG00000001806	-	81	55.000	Gopherus_agassizii
ENSACLG00000005172	zgc:171480	100	100.000	ENSHBUG00000007895	zgc:171480	100	100.000	Haplochromis_burtoni
ENSACLG00000005172	zgc:171480	99	61.314	ENSHCOG00000003526	zgc:171480	73	61.314	Hippocampus_comes
ENSACLG00000005172	zgc:171480	72	63.000	ENSIPUG00000001273	mrpl55	76	63.000	Ictalurus_punctatus
ENSACLG00000005172	zgc:171480	89	61.905	ENSKMAG00000002011	zgc:171480	99	61.905	Kryptolebias_marmoratus
ENSACLG00000005172	zgc:171480	98	67.407	ENSLBEG00000016107	-	100	67.407	Labrus_bergylta
ENSACLG00000005172	zgc:171480	98	67.407	ENSLBEG00000010915	zgc:171480	100	67.407	Labrus_bergylta
ENSACLG00000005172	zgc:171480	72	60.396	ENSLACG00000016281	zgc:171480	77	60.396	Latimeria_chalumnae
ENSACLG00000005172	zgc:171480	100	61.333	ENSMAMG00000022250	zgc:171480	100	61.333	Mastacembelus_armatus
ENSACLG00000005172	zgc:171480	100	99.275	ENSMZEG00005015585	zgc:171480	100	99.275	Maylandia_zebra
ENSACLG00000005172	zgc:171480	75	48.571	ENSMGAG00000002612	-	90	48.571	Meleagris_gallopavo
ENSACLG00000005172	zgc:171480	83	49.123	ENSMMOG00000008740	-	87	49.123	Mola_mola
ENSACLG00000005172	zgc:171480	78	68.224	ENSMALG00000019823	zgc:171480	85	68.224	Monopterus_albus
ENSACLG00000005172	zgc:171480	100	97.826	ENSNBRG00000019447	zgc:171480	100	97.826	Neolamprologus_brichardi
ENSACLG00000005172	zgc:171480	98	95.556	ENSONIG00000007645	zgc:171480	100	95.556	Oreochromis_niloticus
ENSACLG00000005172	zgc:171480	75	64.423	ENSORLG00020006963	zgc:171480	78	64.423	Oryzias_latipes_hni
ENSACLG00000005172	zgc:171480	75	65.385	ENSORLG00015003266	zgc:171480	78	65.385	Oryzias_latipes_hsok
ENSACLG00000005172	zgc:171480	75	68.269	ENSOMEG00000008184	zgc:171480	76	68.269	Oryzias_melastigma
ENSACLG00000005172	zgc:171480	71	63.636	ENSPKIG00000006753	zgc:171480	77	63.636	Paramormyrops_kingsleyae
ENSACLG00000005172	zgc:171480	72	56.000	ENSPSIG00000010893	-	80	56.000	Pelodiscus_sinensis
ENSACLG00000005172	zgc:171480	76	63.208	ENSPMGG00000012657	-	82	63.208	Periophthalmus_magnuspinnatus
ENSACLG00000005172	zgc:171480	67	48.421	ENSPMAG00000000867	zgc:171480	89	46.154	Petromyzon_marinus
ENSACLG00000005172	zgc:171480	72	55.769	ENSPCIG00000021848	-	79	55.769	Phascolarctos_cinereus
ENSACLG00000005172	zgc:171480	88	60.630	ENSPFOG00000012703	zgc:171480	91	60.630	Poecilia_formosa
ENSACLG00000005172	zgc:171480	88	61.417	ENSPREG00000020328	zgc:171480	91	61.417	Poecilia_reticulata
ENSACLG00000005172	zgc:171480	72	64.000	ENSPNAG00000017309	zgc:171480	76	64.000	Pygocentrus_nattereri
ENSACLG00000005172	zgc:171480	97	52.941	ENSSFOG00015015668	mrpl55	100	52.941	Scleropages_formosus
ENSACLG00000005172	zgc:171480	99	65.000	ENSSMAG00000005429	zgc:171480	99	65.000	Scophthalmus_maximus
ENSACLG00000005172	zgc:171480	99	60.839	ENSSDUG00000022556	zgc:171480	95	60.839	Seriola_dumerili
ENSACLG00000005172	zgc:171480	99	60.140	ENSSLDG00000019598	zgc:171480	95	60.140	Seriola_lalandi_dorsalis
ENSACLG00000005172	zgc:171480	75	50.485	ENSSPUG00000000735	-	82	50.485	Sphenodon_punctatus
ENSACLG00000005172	zgc:171480	98	64.583	ENSSPAG00000011598	zgc:171480	100	64.583	Stegastes_partitus
ENSACLG00000005172	zgc:171480	73	68.317	ENSTRUG00000003082	zgc:171480	71	68.317	Takifugu_rubripes
ENSACLG00000005172	zgc:171480	67	74.194	ENSXCOG00000005887	zgc:171480	76	74.194	Xiphophorus_couchianus
ENSACLG00000005172	zgc:171480	88	59.843	ENSXMAG00000007937	zgc:171480	91	59.843	Xiphophorus_maculatus