EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000005269 (Gene tree)
Gene ID: 113030004
Gene Symbol: SRRM3
Alias: FLJ37078
Full Name: serine/arginine repetitive matrix protein 3-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 140164 bases
Position: chr10:7292885-7433048
Accession: 113030004
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000007741	cwf21	PF08312.12	2.3e-15	1	1
ENSACLP00000007765	cwf21	PF08312.12	2.3e-15	1	1
ENSACLP00000007741	SRRM_C	PF15230.6	8e-23	1	1
ENSACLP00000007765	SRRM_C	PF15230.6	8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000007943	SRRM3-202	5530	-	ENSACLP00000007765	639 (aa)	XP_026036777	UPI000E4245A9
ENSACLT00000007919	SRRM3-201	5645	-	ENSACLP00000007741	639 (aa)	XP_026036777	UPI000E4245A9

Gene Model

Click here to download ENSACLG00000005269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000005269's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000005269	SRRM3	87	82.478	ENSAPOG00000000288	SRRM3	87	82.478	Acanthochromis_polyacanthus
ENSACLG00000005269	SRRM3	87	53.596	ENSAMXG00000016051	-	87	55.594	Astyanax_mexicanus
ENSACLG00000005269	SRRM3	87	44.702	ENSCPBG00000027784	SRRM3	90	41.845	Chrysemys_picta_bellii
ENSACLG00000005269	SRRM3	87	69.702	ENSCSEG00000010978	-	80	69.580	Cynoglossus_semilaevis
ENSACLG00000005269	SRRM3	87	76.814	ENSGAFG00000014777	SRRM3	87	76.814	Gambusia_affinis
ENSACLG00000005269	SRRM3	87	46.192	ENSGAGG00000021058	SRRM3	96	41.265	Gopherus_agassizii
ENSACLG00000005269	SRRM3	100	99.220	ENSHBUG00000005061	SRRM3	100	99.220	Haplochromis_burtoni
ENSACLG00000005269	SRRM3	87	49.829	ENSIPUG00000012467	srrm3	87	54.545	Ictalurus_punctatus
ENSACLG00000005269	SRRM3	88	77.661	ENSKMAG00000013495	SRRM3	87	77.289	Kryptolebias_marmoratus
ENSACLG00000005269	SRRM3	52	57.627	ENSLOCG00000002879	SRRM3	99	57.542	Lepisosteus_oculatus
ENSACLG00000005269	SRRM3	89	79.310	ENSMALG00000000844	-	89	79.329	Monopterus_albus
ENSACLG00000005269	SRRM3	88	69.012	ENSONIG00000012732	-	97	67.608	Oreochromis_niloticus
ENSACLG00000005269	SRRM3	88	74.912	ENSORLG00000026242	-	89	74.735	Oryzias_latipes
ENSACLG00000005269	SRRM3	88	75.439	ENSORLG00020016592	-	89	75.265	Oryzias_latipes_hni
ENSACLG00000005269	SRRM3	88	74.912	ENSORLG00015022712	SRRM3	89	74.735	Oryzias_latipes_hsok
ENSACLG00000005269	SRRM3	88	73.509	ENSOMEG00000010768	-	88	73.322	Oryzias_melastigma
ENSACLG00000005269	SRRM3	87	52.641	ENSPKIG00000017233	SRRM3	97	53.462	Paramormyrops_kingsleyae
ENSACLG00000005269	SRRM3	87	57.288	ENSPFOG00000009007	SRRM3	89	55.424	Poecilia_formosa
ENSACLG00000005269	SRRM3	87	76.106	ENSPMEG00000011981	-	87	76.106	Poecilia_mexicana
ENSACLG00000005269	SRRM3	87	76.991	ENSPREG00000008138	-	87	76.991	Poecilia_reticulata
ENSACLG00000005269	SRRM3	87	54.110	ENSPNAG00000009621	SRRM3	87	56.581	Pygocentrus_nattereri
ENSACLG00000005269	SRRM3	61	53.957	ENSSFOG00015001696	SRRM3	91	55.814	Scleropages_formosus
ENSACLG00000005269	SRRM3	87	80.071	ENSSMAG00000000476	SRRM3	88	80.071	Scophthalmus_maximus
ENSACLG00000005269	SRRM3	87	78.893	ENSSLDG00000020070	SRRM3	87	79.585	Seriola_lalandi_dorsalis
ENSACLG00000005269	SRRM3	67	77.778	ENSTNIG00000008549	-	71	77.778	Tetraodon_nigroviridis
ENSACLG00000005269	SRRM3	87	76.460	ENSXMAG00000005663	-	87	76.460	Xiphophorus_maculatus