EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000005315 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 1377 bases
Position: chr3:31547288-31548664
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000007812	RVT_1	PF00078.27	1.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000007992	-	1377	-	ENSACLP00000007812	458 (aa)	-	-

Gene Model

Click here to download ENSACLG00000005315's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000005315's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000005315	-	96	40.183	ENSACLG00000020885	-	54	40.183
ENSACLG00000005315	-	89	41.565	ENSACLG00000010837	-	100	41.565
ENSACLG00000005315	-	92	40.855	ENSACLG00000003896	-	75	40.855
ENSACLG00000005315	-	54	87.097	ENSACLG00000025726	-	53	87.097
ENSACLG00000005315	-	59	48.519	ENSACLG00000013571	-	67	48.519
ENSACLG00000005315	-	83	33.947	ENSACLG00000011312	-	55	33.947
ENSACLG00000005315	-	53	36.842	ENSACLG00000011319	-	64	36.842
ENSACLG00000005315	-	95	41.149	ENSACLG00000008786	-	54	41.149
ENSACLG00000005315	-	51	37.500	ENSACLG00000014736	-	94	37.500
ENSACLG00000005315	-	95	40.230	ENSACLG00000020106	-	55	40.230
ENSACLG00000005315	-	52	36.820	ENSACLG00000017900	-	94	36.820
ENSACLG00000005315	-	74	38.938	ENSACLG00000024620	-	82	38.938
ENSACLG00000005315	-	86	45.316	ENSACLG00000019432	-	88	45.316
ENSACLG00000005315	-	66	86.424	ENSACLG00000025717	-	91	86.424

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000005315	-	80	40.164	ENSAPEG00000021324	-	85	40.164	Amphiprion_percula
ENSACLG00000005315	-	92	38.480	ENSAPEG00000013789	-	56	38.480	Amphiprion_percula
ENSACLG00000005315	-	90	43.902	ENSCVAG00000009961	-	81	43.902	Cyprinodon_variegatus
ENSACLG00000005315	-	51	41.277	ENSFHEG00000006003	-	58	41.277	Fundulus_heteroclitus
ENSACLG00000005315	-	84	44.020	ENSFHEG00000014931	-	73	44.020	Fundulus_heteroclitus
ENSACLG00000005315	-	52	37.657	ENSHBUG00000003593	-	93	37.657	Haplochromis_burtoni
ENSACLG00000005315	-	86	44.670	ENSHBUG00000015481	-	99	44.670	Haplochromis_burtoni
ENSACLG00000005315	-	70	34.062	ENSKMAG00000014672	-	62	34.062	Kryptolebias_marmoratus
ENSACLG00000005315	-	50	32.051	ENSKMAG00000014455	-	86	32.051	Kryptolebias_marmoratus
ENSACLG00000005315	-	53	36.145	ENSLBEG00000023571	-	71	36.145	Labrus_bergylta
ENSACLG00000005315	-	72	39.818	ENSLBEG00000015833	-	80	39.818	Labrus_bergylta
ENSACLG00000005315	-	56	40.078	ENSLBEG00000022922	-	84	40.078	Labrus_bergylta
ENSACLG00000005315	-	60	40.217	ENSLBEG00000015744	-	99	40.217	Labrus_bergylta
ENSACLG00000005315	-	84	44.909	ENSLBEG00000012683	-	97	44.909	Labrus_bergylta
ENSACLG00000005315	-	66	34.603	ENSMZEG00005014401	-	89	34.603	Maylandia_zebra
ENSACLG00000005315	-	52	36.402	ENSMZEG00005015360	-	94	36.402	Maylandia_zebra
ENSACLG00000005315	-	58	36.466	ENSMMOG00000014893	-	91	36.466	Mola_mola
ENSACLG00000005315	-	50	40.000	ENSONIG00000020621	-	73	40.000	Oreochromis_niloticus
ENSACLG00000005315	-	82	46.933	ENSORLG00000022016	-	70	46.933	Oryzias_latipes
ENSACLG00000005315	-	60	30.686	ENSORLG00000027739	-	84	30.686	Oryzias_latipes
ENSACLG00000005315	-	62	36.749	ENSORLG00000028717	-	63	36.749	Oryzias_latipes
ENSACLG00000005315	-	84	40.310	ENSORLG00020017190	-	90	40.310	Oryzias_latipes_hni
ENSACLG00000005315	-	91	43.541	ENSORLG00020005447	-	72	43.541	Oryzias_latipes_hni
ENSACLG00000005315	-	51	43.590	ENSORLG00015003246	-	87	43.590	Oryzias_latipes_hsok
ENSACLG00000005315	-	66	36.928	ENSORLG00015013361	-	77	36.928	Oryzias_latipes_hsok
ENSACLG00000005315	-	71	43.731	ENSPKIG00000004060	-	76	43.731	Paramormyrops_kingsleyae
ENSACLG00000005315	-	83	42.932	ENSPKIG00000013191	-	80	42.932	Paramormyrops_kingsleyae
ENSACLG00000005315	-	72	37.612	ENSPKIG00000025567	-	76	37.612	Paramormyrops_kingsleyae
ENSACLG00000005315	-	76	36.599	ENSPFOG00000024165	-	80	36.599	Poecilia_formosa
ENSACLG00000005315	-	72	33.728	ENSPFOG00000024190	-	70	33.728	Poecilia_formosa
ENSACLG00000005315	-	54	42.276	ENSPLAG00000014995	-	87	42.276	Poecilia_latipinna
ENSACLG00000005315	-	62	60.000	ENSPMEG00000016120	-	98	60.000	Poecilia_mexicana
ENSACLG00000005315	-	59	34.444	ENSPREG00000005467	-	79	34.444	Poecilia_reticulata
ENSACLG00000005315	-	91	44.681	ENSPNYG00000005142	-	90	44.681	Pundamilia_nyererei
ENSACLG00000005315	-	58	35.338	ENSPNYG00000010501	-	88	35.338	Pundamilia_nyererei
ENSACLG00000005315	-	50	36.404	ENSPNYG00000024140	-	96	36.404	Pundamilia_nyererei
ENSACLG00000005315	-	85	40.617	ENSPNAG00000027547	-	69	40.617	Pygocentrus_nattereri
ENSACLG00000005315	-	54	41.036	ENSXETG00000030237	-	96	41.036	Xenopus_tropicalis
ENSACLG00000005315	-	51	34.615	ENSXETG00000033469	-	96	34.615	Xenopus_tropicalis
ENSACLG00000005315	-	56	33.852	ENSXETG00000032645	-	99	33.852	Xenopus_tropicalis
ENSACLG00000005315	-	63	30.263	ENSXCOG00000007285	-	95	30.263	Xiphophorus_couchianus
ENSACLG00000005315	-	54	34.818	ENSXMAG00000025990	-	65	34.818	Xiphophorus_maculatus
ENSACLG00000005315	-	57	41.923	ENSXMAG00000026828	-	95	41.923	Xiphophorus_maculatus