EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000005395 (Gene tree)
Gene ID: 113009600
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 7033 bases
Position: chr17:34925750-34932782
Accession: 113009600
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000007947	tRNA_Me_trans	PF03054.16	7.6e-136	1	1
ENSACLP00000007927	tRNA_Me_trans	PF03054.16	1.9e-127	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000008129	-	3450	-	ENSACLP00000007947	416 (aa)	XP_026003789	UPI000E40A7CC
ENSACLT00000008110	-	3543	-	ENSACLP00000007927	377 (aa)	-	-

Gene Model

Click here to download ENSACLG00000005395's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000005395's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000005395	trmu	99	70.460	ENSG00000100416	TRMU	96	76.730	Homo_sapiens
ENSACLG00000005395	trmu	100	88.489	ENSAPOG00000014458	trmu	100	88.489	Acanthochromis_polyacanthus
ENSACLG00000005395	trmu	97	70.411	ENSAMEG00000003319	TRMU	96	70.677	Ailuropoda_melanoleuca
ENSACLG00000005395	trmu	100	93.990	ENSACIG00000002101	trmu	100	93.990	Amphilophus_citrinellus
ENSACLG00000005395	trmu	100	89.209	ENSAOCG00000013155	trmu	100	89.209	Amphiprion_ocellaris
ENSACLG00000005395	trmu	100	88.969	ENSAPEG00000013350	trmu	100	88.969	Amphiprion_percula
ENSACLG00000005395	trmu	100	84.856	ENSATEG00000007814	trmu	100	84.856	Anabas_testudineus
ENSACLG00000005395	trmu	93	71.835	ENSAPLG00000016380	TRMU	98	71.835	Anas_platyrhynchos
ENSACLG00000005395	trmu	97	71.233	ENSACAG00000007720	TRMU	95	71.392	Anolis_carolinensis
ENSACLG00000005395	trmu	98	70.461	ENSANAG00000038053	TRMU	95	70.720	Aotus_nancymaae
ENSACLG00000005395	trmu	98	80.759	ENSAMXG00000005282	trmu	99	79.218	Astyanax_mexicanus
ENSACLG00000005395	trmu	98	70.461	ENSBTAG00000005595	TRMU	95	71.285	Bos_taurus
ENSACLG00000005395	trmu	97	40.909	WBGene00007114	mttu-1	98	41.176	Caenorhabditis_elegans
ENSACLG00000005395	trmu	98	69.648	ENSCJAG00000000198	TRMU	99	68.106	Callithrix_jacchus
ENSACLG00000005395	trmu	98	70.461	ENSCAFG00000000779	TRMU	95	70.223	Canis_familiaris
ENSACLG00000005395	trmu	98	70.461	ENSCAFG00020009184	TRMU	95	70.223	Canis_lupus_dingo
ENSACLG00000005395	trmu	98	70.190	ENSCHIG00000017074	TRMU	95	71.033	Capra_hircus
ENSACLG00000005395	trmu	98	71.274	ENSTSYG00000003853	TRMU	96	70.968	Carlito_syrichta
ENSACLG00000005395	trmu	94	66.339	ENSCAPG00000013034	TRMU	96	66.339	Cavia_aperea
ENSACLG00000005395	trmu	98	69.377	ENSCPOG00000020780	TRMU	96	70.223	Cavia_porcellus
ENSACLG00000005395	trmu	98	69.377	ENSCCAG00000021641	TRMU	99	68.269	Cebus_capucinus
ENSACLG00000005395	trmu	98	70.190	ENSCATG00000032800	TRMU	95	70.927	Cercocebus_atys
ENSACLG00000005395	trmu	98	69.919	ENSCLAG00000017269	TRMU	96	70.471	Chinchilla_lanigera
ENSACLG00000005395	trmu	98	70.190	ENSCSAG00000005279	TRMU	96	70.123	Chlorocebus_sabaeus
ENSACLG00000005395	trmu	91	71.930	ENSCPBG00000011621	TRMU	93	72.312	Chrysemys_picta_bellii
ENSACLG00000005395	trmu	97	46.866	ENSCING00000019371	-	97	47.103	Ciona_intestinalis
ENSACLG00000005395	trmu	98	69.919	ENSCANG00000041645	TRMU	96	69.630	Colobus_angolensis_palliatus
ENSACLG00000005395	trmu	98	69.648	ENSCGRG00001001739	Trmu	96	69.727	Cricetulus_griseus_chok1gshd
ENSACLG00000005395	trmu	98	63.957	ENSCGRG00000002781	Trmu	96	64.516	Cricetulus_griseus_crigri
ENSACLG00000005395	trmu	98	81.301	ENSCSEG00000012382	trmu	99	80.193	Cynoglossus_semilaevis
ENSACLG00000005395	trmu	100	87.500	ENSCVAG00000001366	trmu	100	87.500	Cyprinodon_variegatus
ENSACLG00000005395	trmu	98	76.694	ENSDARG00000043734	trmu	100	74.519	Danio_rerio
ENSACLG00000005395	trmu	64	56.716	ENSDNOG00000047245	-	94	56.716	Dasypus_novemcinctus
ENSACLG00000005395	trmu	98	70.732	ENSDORG00000007455	Trmu	97	71.429	Dipodomys_ordii
ENSACLG00000005395	trmu	97	44.142	FBgn0040337	CG3021	95	44.041	Drosophila_melanogaster
ENSACLG00000005395	trmu	51	73.729	ENSETEG00000009394	-	66	73.729	Echinops_telfairi
ENSACLG00000005395	trmu	97	55.256	ENSEBUG00000007454	trmu	100	55.043	Eptatretus_burgeri
ENSACLG00000005395	trmu	98	71.545	ENSEASG00005021725	TRMU	96	71.464	Equus_asinus_asinus
ENSACLG00000005395	trmu	98	71.545	ENSECAG00000000467	TRMU	95	71.464	Equus_caballus
ENSACLG00000005395	trmu	68	53.521	ENSEEUG00000000074	-	68	53.521	Erinaceus_europaeus
ENSACLG00000005395	trmu	98	81.402	ENSELUG00000009464	trmu	99	81.793	Esox_lucius
ENSACLG00000005395	trmu	98	71.274	ENSFCAG00000006533	TRMU	95	71.429	Felis_catus
ENSACLG00000005395	trmu	91	71.714	ENSFALG00000010035	TRMU	96	71.842	Ficedula_albicollis
ENSACLG00000005395	trmu	90	69.519	ENSFDAG00000017472	TRMU	95	69.519	Fukomys_damarensis
ENSACLG00000005395	trmu	100	87.260	ENSFHEG00000003162	trmu	100	87.260	Fundulus_heteroclitus
ENSACLG00000005395	trmu	98	73.190	ENSGMOG00000001323	trmu	100	73.464	Gadus_morhua
ENSACLG00000005395	trmu	98	72.149	ENSGALG00000031922	TRMU	96	72.727	Gallus_gallus
ENSACLG00000005395	trmu	99	88.293	ENSGAFG00000013331	trmu	98	88.293	Gambusia_affinis
ENSACLG00000005395	trmu	100	85.343	ENSGACG00000019024	trmu	100	85.343	Gasterosteus_aculeatus
ENSACLG00000005395	trmu	99	70.218	ENSGGOG00000000203	TRMU	98	70.218	Gorilla_gorilla
ENSACLG00000005395	trmu	100	99.519	ENSHBUG00000023421	trmu	100	99.519	Haplochromis_burtoni
ENSACLG00000005395	trmu	98	68.835	ENSHGLG00000009278	TRMU	95	69.403	Heterocephalus_glaber_female
ENSACLG00000005395	trmu	98	68.835	ENSHGLG00100018863	TRMU	95	69.403	Heterocephalus_glaber_male
ENSACLG00000005395	trmu	98	86.721	ENSHCOG00000013459	trmu	99	84.783	Hippocampus_comes
ENSACLG00000005395	trmu	98	78.320	ENSIPUG00000009785	trmu	99	78.304	Ictalurus_punctatus
ENSACLG00000005395	trmu	98	70.190	ENSSTOG00000010993	TRMU	96	70.720	Ictidomys_tridecemlineatus
ENSACLG00000005395	trmu	98	69.106	ENSJJAG00000000667	Trmu	96	69.652	Jaculus_jaculus
ENSACLG00000005395	trmu	100	85.337	ENSKMAG00000008516	trmu	100	85.337	Kryptolebias_marmoratus
ENSACLG00000005395	trmu	100	86.058	ENSLBEG00000018831	trmu	100	86.058	Labrus_bergylta
ENSACLG00000005395	trmu	97	77.929	ENSLACG00000013713	TRMU	96	76.923	Latimeria_chalumnae
ENSACLG00000005395	trmu	98	79.675	ENSLOCG00000016066	trmu	96	79.500	Lepisosteus_oculatus
ENSACLG00000005395	trmu	99	62.077	ENSLAFG00000005129	TRMU	99	62.077	Loxodonta_africana
ENSACLG00000005395	trmu	98	70.461	ENSMFAG00000039767	TRMU	96	70.370	Macaca_fascicularis
ENSACLG00000005395	trmu	98	70.461	ENSMMUG00000000807	TRMU	96	70.370	Macaca_mulatta
ENSACLG00000005395	trmu	98	70.461	ENSMNEG00000028164	TRMU	96	70.370	Macaca_nemestrina
ENSACLG00000005395	trmu	98	70.190	ENSMLEG00000033884	TRMU	95	70.927	Mandrillus_leucophaeus
ENSACLG00000005395	trmu	100	86.058	ENSMAMG00000004717	trmu	100	86.058	Mastacembelus_armatus
ENSACLG00000005395	trmu	100	99.760	ENSMZEG00005015797	trmu	100	99.760	Maylandia_zebra
ENSACLG00000005395	trmu	76	72.086	ENSMGAG00000007550	TRMU	95	72.086	Meleagris_gallopavo
ENSACLG00000005395	trmu	98	69.377	ENSMAUG00000022282	Trmu	96	69.674	Mesocricetus_auratus
ENSACLG00000005395	trmu	98	69.919	ENSMICG00000029046	TRMU	97	70.175	Microcebus_murinus
ENSACLG00000005395	trmu	98	69.919	ENSMOCG00000014641	Trmu	97	69.975	Microtus_ochrogaster
ENSACLG00000005395	trmu	100	83.173	ENSMMOG00000007229	trmu	100	83.173	Mola_mola
ENSACLG00000005395	trmu	97	67.030	ENSMODG00000007433	TRMU	93	67.839	Monodelphis_domestica
ENSACLG00000005395	trmu	98	88.076	ENSMALG00000007721	trmu	100	85.817	Monopterus_albus
ENSACLG00000005395	trmu	99	68.127	MGP_CAROLIEiJ_G0020134	Trmu	99	68.127	Mus_caroli
ENSACLG00000005395	trmu	98	69.377	ENSMUSG00000022386	Trmu	99	68.357	Mus_musculus
ENSACLG00000005395	trmu	99	68.116	MGP_PahariEiJ_G0020139	Trmu	99	68.116	Mus_pahari
ENSACLG00000005395	trmu	98	69.377	MGP_SPRETEiJ_G0021031	Trmu	99	68.357	Mus_spretus
ENSACLG00000005395	trmu	98	70.190	ENSMPUG00000002523	TRMU	96	69.383	Mustela_putorius_furo
ENSACLG00000005395	trmu	99	69.157	ENSNGAG00000005132	Trmu	99	69.157	Nannospalax_galili
ENSACLG00000005395	trmu	100	99.038	ENSNBRG00000022690	trmu	100	99.038	Neolamprologus_brichardi
ENSACLG00000005395	trmu	98	71.003	ENSNLEG00000015773	TRMU	96	70.968	Nomascus_leucogenys
ENSACLG00000005395	trmu	87	58.410	ENSMEUG00000000216	TRMU	99	58.410	Notamacropus_eugenii
ENSACLG00000005395	trmu	98	69.377	ENSODEG00000014745	TRMU	97	69.877	Octodon_degus
ENSACLG00000005395	trmu	100	98.558	ENSONIG00000009821	trmu	100	98.558	Oreochromis_niloticus
ENSACLG00000005395	trmu	93	64.781	ENSOANG00000001891	TRMU	98	64.781	Ornithorhynchus_anatinus
ENSACLG00000005395	trmu	91	69.883	ENSOCUG00000003664	TRMU	94	69.036	Oryctolagus_cuniculus
ENSACLG00000005395	trmu	99	83.051	ENSORLG00000019015	trmu	99	83.051	Oryzias_latipes
ENSACLG00000005395	trmu	99	83.293	ENSORLG00020006830	trmu	99	83.293	Oryzias_latipes_hni
ENSACLG00000005395	trmu	99	83.293	ENSORLG00015003907	trmu	99	83.293	Oryzias_latipes_hsok
ENSACLG00000005395	trmu	55	89.956	ENSOMEG00000015541	trmu	83	89.956	Oryzias_melastigma
ENSACLG00000005395	trmu	98	68.835	ENSOGAG00000008096	TRMU	97	68.734	Otolemur_garnettii
ENSACLG00000005395	trmu	98	69.106	ENSOARG00000019475	TRMU	93	67.895	Ovis_aries
ENSACLG00000005395	trmu	99	70.218	ENSPPAG00000033944	TRMU	98	70.218	Pan_paniscus
ENSACLG00000005395	trmu	98	71.003	ENSPPRG00000004197	TRMU	95	71.178	Panthera_pardus
ENSACLG00000005395	trmu	73	71.480	ENSPTIG00000014122	TRMU	97	73.106	Panthera_tigris_altaica
ENSACLG00000005395	trmu	99	70.218	ENSPTRG00000014510	TRMU	98	70.218	Pan_troglodytes
ENSACLG00000005395	trmu	98	70.190	ENSPANG00000023074	TRMU	97	67.945	Papio_anubis
ENSACLG00000005395	trmu	100	77.404	ENSPKIG00000002849	trmu	100	77.404	Paramormyrops_kingsleyae
ENSACLG00000005395	trmu	89	72.156	ENSPSIG00000013020	TRMU	95	72.527	Pelodiscus_sinensis
ENSACLG00000005395	trmu	100	83.894	ENSPMGG00000004083	trmu	100	83.894	Periophthalmus_magnuspinnatus
ENSACLG00000005395	trmu	100	68.269	ENSPEMG00000014007	Trmu	98	68.269	Peromyscus_maniculatus_bairdii
ENSACLG00000005395	trmu	96	66.759	ENSPCIG00000009923	TRMU	93	66.835	Phascolarctos_cinereus
ENSACLG00000005395	trmu	97	84.406	ENSPFOG00000008197	trmu	90	84.406	Poecilia_formosa
ENSACLG00000005395	trmu	99	87.440	ENSPLAG00000008414	trmu	99	87.440	Poecilia_latipinna
ENSACLG00000005395	trmu	100	87.740	ENSPMEG00000004326	trmu	100	87.740	Poecilia_mexicana
ENSACLG00000005395	trmu	98	88.889	ENSPREG00000007980	trmu	99	87.681	Poecilia_reticulata
ENSACLG00000005395	trmu	98	71.274	ENSPPYG00000011949	TRMU	98	70.120	Pongo_abelii
ENSACLG00000005395	trmu	93	63.049	ENSPCAG00000013462	TRMU	99	63.049	Procavia_capensis
ENSACLG00000005395	trmu	98	69.377	ENSPCOG00000016539	TRMU	96	69.674	Propithecus_coquereli
ENSACLG00000005395	trmu	98	64.770	ENSPVAG00000013202	TRMU	97	65.012	Pteropus_vampyrus
ENSACLG00000005395	trmu	100	99.519	ENSPNYG00000005629	trmu	100	99.519	Pundamilia_nyererei
ENSACLG00000005395	trmu	100	78.846	ENSPNAG00000006339	trmu	97	78.846	Pygocentrus_nattereri
ENSACLG00000005395	trmu	98	68.835	ENSRNOG00000016465	Trmu	97	68.983	Rattus_norvegicus
ENSACLG00000005395	trmu	98	69.648	ENSRBIG00000038973	TRMU	96	69.136	Rhinopithecus_bieti
ENSACLG00000005395	trmu	98	69.919	ENSRROG00000004267	TRMU	96	69.383	Rhinopithecus_roxellana
ENSACLG00000005395	trmu	97	33.077	YDL033C	SLM3	94	33.172	Saccharomyces_cerevisiae
ENSACLG00000005395	trmu	99	68.750	ENSSBOG00000030184	TRMU	99	68.750	Saimiri_boliviensis_boliviensis
ENSACLG00000005395	trmu	89	77.545	ENSSFOG00015020664	trmu	99	75.462	Scleropages_formosus
ENSACLG00000005395	trmu	100	87.260	ENSSMAG00000019450	trmu	100	87.260	Scophthalmus_maximus
ENSACLG00000005395	trmu	100	88.702	ENSSDUG00000011913	trmu	100	88.702	Seriola_dumerili
ENSACLG00000005395	trmu	100	88.462	ENSSLDG00000011684	trmu	100	88.462	Seriola_lalandi_dorsalis
ENSACLG00000005395	trmu	99	60.194	ENSSPUG00000017123	TRMU	96	60.194	Sphenodon_punctatus
ENSACLG00000005395	trmu	100	86.058	ENSSPAG00000021875	trmu	100	86.058	Stegastes_partitus
ENSACLG00000005395	trmu	98	69.648	ENSSSCG00000000007	TRMU	96	70.223	Sus_scrofa
ENSACLG00000005395	trmu	91	73.256	ENSTGUG00000003663	-	100	73.458	Taeniopygia_guttata
ENSACLG00000005395	trmu	98	86.450	ENSTRUG00000001231	trmu	100	85.230	Takifugu_rubripes
ENSACLG00000005395	trmu	99	84.337	ENSTNIG00000010484	trmu	98	84.337	Tetraodon_nigroviridis
ENSACLG00000005395	trmu	72	55.000	ENSTBEG00000011276	-	77	55.000	Tupaia_belangeri
ENSACLG00000005395	trmu	98	71.274	ENSTTRG00000004160	TRMU	95	71.930	Tursiops_truncatus
ENSACLG00000005395	trmu	77	72.852	ENSUAMG00000024825	TRMU	98	72.355	Ursus_americanus
ENSACLG00000005395	trmu	97	58.065	ENSUMAG00000019079	TRMU	97	72.656	Ursus_maritimus
ENSACLG00000005395	trmu	58	61.644	ENSVPAG00000000685	-	100	61.644	Vicugna_pacos
ENSACLG00000005395	trmu	98	69.648	ENSVVUG00000024963	TRMU	96	69.479	Vulpes_vulpes
ENSACLG00000005395	trmu	98	74.595	ENSXETG00000023304	trmu	94	74.564	Xenopus_tropicalis
ENSACLG00000005395	trmu	99	85.851	ENSXCOG00000015105	trmu	99	85.851	Xiphophorus_couchianus
ENSACLG00000005395	trmu	98	89.702	ENSXMAG00000006697	trmu	99	88.406	Xiphophorus_maculatus