EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000005471 (Gene tree)
Gene ID: 113029298
Gene Symbol: si:ch211-153b23.4
Alias: fj08f03|fj10b02|im:7041150|wu:fj08f03|wu:fj10b02
Full Name: uncharacterized LOC113029298
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 4307 bases
Position: chr2:26732931-26737237
Accession: 113029298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000008033	Sua5_yciO_yrdC	PF01300.18	3.9e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000008219	-	2912	XM_026180106	ENSACLP00000008033	883 (aa)	XP_026035891	UPI0006CEEBE4

Gene Model

Click here to download ENSACLG00000005471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000005471's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000005471	si:ch211-153b23.4	58	33.766	ENSACLG00000005894	si:ch211-153b23.3	59	33.766

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000005471	si:ch211-153b23.4	99	77.677	ENSAPOG00000006178	si:ch211-153b23.4	99	77.449	Acanthochromis_polyacanthus
ENSACLG00000005471	si:ch211-153b23.4	94	80.532	ENSAPOG00000006144	si:ch211-153b23.4	95	81.481	Acanthochromis_polyacanthus
ENSACLG00000005471	si:ch211-153b23.4	94	88.609	ENSACIG00000006997	si:ch211-153b23.4	98	88.609	Amphilophus_citrinellus
ENSACLG00000005471	si:ch211-153b23.4	55	45.833	ENSACIG00000006968	si:ch211-153b23.3	55	45.833	Amphilophus_citrinellus
ENSACLG00000005471	si:ch211-153b23.4	92	75.613	ENSAOCG00000010999	si:ch211-153b23.4	99	75.613	Amphiprion_ocellaris
ENSACLG00000005471	si:ch211-153b23.4	58	33.209	ENSAOCG00000010974	si:ch211-153b23.3	59	33.209	Amphiprion_ocellaris
ENSACLG00000005471	si:ch211-153b23.4	96	77.739	ENSAPEG00000014665	si:ch211-153b23.4	99	77.739	Amphiprion_percula
ENSACLG00000005471	si:ch211-153b23.4	58	32.642	ENSAPEG00000014700	si:ch211-153b23.3	59	32.900	Amphiprion_percula
ENSACLG00000005471	si:ch211-153b23.4	98	81.379	ENSATEG00000004948	si:ch211-153b23.4	99	81.379	Anabas_testudineus
ENSACLG00000005471	si:ch211-153b23.4	58	32.642	ENSATEG00000004956	si:ch211-153b23.3	58	32.642	Anabas_testudineus
ENSACLG00000005471	si:ch211-153b23.4	93	59.371	ENSAPLG00000013596	-	99	59.371	Anas_platyrhynchos
ENSACLG00000005471	si:ch211-153b23.4	96	69.421	ENSAMXG00000013879	si:ch211-153b23.4	99	69.421	Astyanax_mexicanus
ENSACLG00000005471	si:ch211-153b23.4	71	30.687	ENSAMXG00000038564	si:ch211-153b23.3	72	30.000	Astyanax_mexicanus
ENSACLG00000005471	si:ch211-153b23.4	95	77.024	ENSCSEG00000014838	si:ch211-153b23.4	99	77.024	Cynoglossus_semilaevis
ENSACLG00000005471	si:ch211-153b23.4	58	34.216	ENSCSEG00000014853	si:ch211-153b23.3	58	34.216	Cynoglossus_semilaevis
ENSACLG00000005471	si:ch211-153b23.4	92	81.088	ENSCVAG00000021145	si:ch211-153b23.4	100	81.088	Cyprinodon_variegatus
ENSACLG00000005471	si:ch211-153b23.4	98	68.894	ENSDARG00000077169	si:ch211-153b23.4	99	68.894	Danio_rerio
ENSACLG00000005471	si:ch211-153b23.4	97	67.738	ENSELUG00000004961	si:ch211-153b23.4	98	67.237	Esox_lucius
ENSACLG00000005471	si:ch211-153b23.4	92	56.304	ENSFALG00000011343	-	94	56.304	Ficedula_albicollis
ENSACLG00000005471	si:ch211-153b23.4	91	80.899	ENSFHEG00000010001	si:ch211-153b23.4	100	80.899	Fundulus_heteroclitus
ENSACLG00000005471	si:ch211-153b23.4	83	85.217	ENSFHEG00000009888	si:ch211-153b23.4	82	85.217	Fundulus_heteroclitus
ENSACLG00000005471	si:ch211-153b23.4	58	33.648	ENSGAFG00000007455	si:ch211-153b23.3	59	33.648	Gambusia_affinis
ENSACLG00000005471	si:ch211-153b23.4	88	80.051	ENSGAFG00000007442	si:ch211-153b23.4	93	80.051	Gambusia_affinis
ENSACLG00000005471	si:ch211-153b23.4	95	79.356	ENSGACG00000018253	si:ch211-153b23.4	98	79.356	Gasterosteus_aculeatus
ENSACLG00000005471	si:ch211-153b23.4	79	62.804	ENSGAGG00000024601	-	93	62.804	Gopherus_agassizii
ENSACLG00000005471	si:ch211-153b23.4	76	98.514	ENSHBUG00000000013	si:ch211-153b23.4	89	98.514	Haplochromis_burtoni
ENSACLG00000005471	si:ch211-153b23.4	58	33.766	ENSHBUG00000001760	si:ch211-153b23.3	59	33.766	Haplochromis_burtoni
ENSACLG00000005471	si:ch211-153b23.4	94	70.277	ENSIPUG00000015205	si:ch211-153b23.4	99	70.277	Ictalurus_punctatus
ENSACLG00000005471	si:ch211-153b23.4	65	31.271	ENSKMAG00000006792	si:ch211-153b23.3	66	31.271	Kryptolebias_marmoratus
ENSACLG00000005471	si:ch211-153b23.4	92	82.699	ENSKMAG00000006829	si:ch211-153b23.4	100	82.699	Kryptolebias_marmoratus
ENSACLG00000005471	si:ch211-153b23.4	99	79.909	ENSKMAG00000006919	-	99	79.909	Kryptolebias_marmoratus
ENSACLG00000005471	si:ch211-153b23.4	99	79.361	ENSLBEG00000026309	si:ch211-153b23.4	100	79.361	Labrus_bergylta
ENSACLG00000005471	si:ch211-153b23.4	59	32.955	ENSLBEG00000026324	si:ch211-153b23.3	56	32.955	Labrus_bergylta
ENSACLG00000005471	si:ch211-153b23.4	92	63.415	ENSLACG00000017592	si:ch211-153b23.4	98	63.415	Latimeria_chalumnae
ENSACLG00000005471	si:ch211-153b23.4	71	30.475	ENSLACG00000005800	-	77	30.475	Latimeria_chalumnae
ENSACLG00000005471	si:ch211-153b23.4	93	84.531	ENSMAMG00000009277	si:ch211-153b23.4	99	84.531	Mastacembelus_armatus
ENSACLG00000005471	si:ch211-153b23.4	93	84.737	ENSMAMG00000009358	si:ch211-153b23.4	100	84.737	Mastacembelus_armatus
ENSACLG00000005471	si:ch211-153b23.4	58	32.319	ENSMAMG00000009328	si:ch211-153b23.3	58	32.319	Mastacembelus_armatus
ENSACLG00000005471	si:ch211-153b23.4	93	99.513	ENSMZEG00005011433	si:ch211-153b23.4	100	99.513	Maylandia_zebra
ENSACLG00000005471	si:ch211-153b23.4	58	33.456	ENSMZEG00005011450	si:ch211-153b23.3	59	33.766	Maylandia_zebra
ENSACLG00000005471	si:ch211-153b23.4	93	59.564	ENSMGAG00000005478	-	100	59.564	Meleagris_gallopavo
ENSACLG00000005471	si:ch211-153b23.4	92	81.582	ENSMMOG00000004425	si:ch211-153b23.4	100	81.582	Mola_mola
ENSACLG00000005471	si:ch211-153b23.4	90	98.871	ENSNBRG00000013392	si:ch211-153b23.4	100	98.871	Neolamprologus_brichardi
ENSACLG00000005471	si:ch211-153b23.4	58	33.640	ENSNBRG00000013370	si:ch211-153b23.3	59	33.952	Neolamprologus_brichardi
ENSACLG00000005471	si:ch211-153b23.4	99	97.712	ENSONIG00000017875	si:ch211-153b23.4	100	97.712	Oreochromis_niloticus
ENSACLG00000005471	si:ch211-153b23.4	72	31.459	ENSORLG00000006161	si:ch211-153b23.3	75	31.459	Oryzias_latipes
ENSACLG00000005471	si:ch211-153b23.4	99	77.663	ENSORLG00000006169	si:ch211-153b23.4	99	77.663	Oryzias_latipes
ENSACLG00000005471	si:ch211-153b23.4	99	78.007	ENSORLG00020009905	si:ch211-153b23.4	99	78.007	Oryzias_latipes_hni
ENSACLG00000005471	si:ch211-153b23.4	99	77.663	ENSORLG00015003709	si:ch211-153b23.4	99	77.663	Oryzias_latipes_hsok
ENSACLG00000005471	si:ch211-153b23.4	58	33.652	ENSOMEG00000007661	si:ch211-153b23.3	59	33.652	Oryzias_melastigma
ENSACLG00000005471	si:ch211-153b23.4	97	78.363	ENSOMEG00000007682	si:ch211-153b23.4	99	78.226	Oryzias_melastigma
ENSACLG00000005471	si:ch211-153b23.4	97	68.538	ENSPKIG00000025681	si:ch211-153b23.4	99	68.538	Paramormyrops_kingsleyae
ENSACLG00000005471	si:ch211-153b23.4	55	32.657	ENSPKIG00000022450	si:ch211-153b23.3	56	32.657	Paramormyrops_kingsleyae
ENSACLG00000005471	si:ch211-153b23.4	97	65.658	ENSPKIG00000014429	si:ch211-153b23.4	99	65.658	Paramormyrops_kingsleyae
ENSACLG00000005471	si:ch211-153b23.4	93	63.152	ENSPMGG00000001313	si:ch211-153b23.4	89	63.421	Periophthalmus_magnuspinnatus
ENSACLG00000005471	si:ch211-153b23.4	77	82.743	ENSPFOG00000012164	si:ch211-153b23.4	95	82.743	Poecilia_formosa
ENSACLG00000005471	si:ch211-153b23.4	58	33.837	ENSPFOG00000012289	si:ch211-153b23.3	59	33.837	Poecilia_formosa
ENSACLG00000005471	si:ch211-153b23.4	91	80.348	ENSPLAG00000016295	si:ch211-153b23.4	99	80.348	Poecilia_latipinna
ENSACLG00000005471	si:ch211-153b23.4	58	33.776	ENSPLAG00000016320	si:ch211-153b23.3	59	33.776	Poecilia_latipinna
ENSACLG00000005471	si:ch211-153b23.4	58	33.459	ENSPMEG00000008884	si:ch211-153b23.3	59	33.459	Poecilia_mexicana
ENSACLG00000005471	si:ch211-153b23.4	88	79.129	ENSPMEG00000007538	si:ch211-153b23.4	95	79.028	Poecilia_mexicana
ENSACLG00000005471	si:ch211-153b23.4	58	33.766	ENSPNYG00000000251	si:ch211-153b23.3	59	33.766	Pundamilia_nyererei
ENSACLG00000005471	si:ch211-153b23.4	93	99.269	ENSPNYG00000000250	si:ch211-153b23.4	100	99.269	Pundamilia_nyererei
ENSACLG00000005471	si:ch211-153b23.4	97	70.302	ENSPNAG00000019554	si:ch211-153b23.4	97	70.302	Pygocentrus_nattereri
ENSACLG00000005471	si:ch211-153b23.4	98	65.600	ENSSFOG00015003920	-	99	65.600	Scleropages_formosus
ENSACLG00000005471	si:ch211-153b23.4	98	70.853	ENSSFOG00015010891	si:ch211-153b23.4	99	70.853	Scleropages_formosus
ENSACLG00000005471	si:ch211-153b23.4	59	33.397	ENSSFOG00015010910	si:ch211-153b23.3	58	33.397	Scleropages_formosus
ENSACLG00000005471	si:ch211-153b23.4	58	33.648	ENSSMAG00000005446	si:ch211-153b23.3	58	33.648	Scophthalmus_maximus
ENSACLG00000005471	si:ch211-153b23.4	99	79.634	ENSSMAG00000010067	si:ch211-153b23.4	100	79.634	Scophthalmus_maximus
ENSACLG00000005471	si:ch211-153b23.4	92	83.066	ENSSDUG00000006671	si:ch211-153b23.4	100	83.066	Seriola_dumerili
ENSACLG00000005471	si:ch211-153b23.4	86	79.487	ENSSDUG00000006842	si:ch211-153b23.4	93	79.487	Seriola_dumerili
ENSACLG00000005471	si:ch211-153b23.4	76	81.548	ENSSDUG00000006931	si:ch211-153b23.4	92	81.548	Seriola_dumerili
ENSACLG00000005471	si:ch211-153b23.4	59	34.087	ENSSLDG00000008629	si:ch211-153b23.3	56	34.087	Seriola_lalandi_dorsalis
ENSACLG00000005471	si:ch211-153b23.4	92	58.629	ENSTGUG00000005499	-	99	58.507	Taeniopygia_guttata
ENSACLG00000005471	si:ch211-153b23.4	92	78.863	ENSTRUG00000003247	si:ch211-153b23.4	100	78.863	Takifugu_rubripes
ENSACLG00000005471	si:ch211-153b23.4	59	34.286	ENSTRUG00000020530	si:ch211-153b23.3	57	34.286	Takifugu_rubripes
ENSACLG00000005471	si:ch211-153b23.4	94	77.644	ENSTNIG00000008958	si:ch211-153b23.4	100	77.644	Tetraodon_nigroviridis
ENSACLG00000005471	si:ch211-153b23.4	59	30.725	ENSTNIG00000008962	si:ch211-153b23.3	54	30.667	Tetraodon_nigroviridis
ENSACLG00000005471	si:ch211-153b23.4	97	54.535	ENSXETG00000004489	-	95	54.535	Xenopus_tropicalis
ENSACLG00000005471	si:ch211-153b23.4	94	81.175	ENSXMAG00000021388	si:ch211-153b23.4	100	81.175	Xiphophorus_maculatus
ENSACLG00000005471	si:ch211-153b23.4	94	79.856	ENSXMAG00000009416	-	98	79.856	Xiphophorus_maculatus
ENSACLG00000005471	si:ch211-153b23.4	58	33.523	ENSXMAG00000029318	si:ch211-153b23.3	59	33.523	Xiphophorus_maculatus