EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000005575 (Gene tree)
Gene ID: -
Gene Symbol: rbm12b (1 of many)
Alias: fi89g10|si:ch211-193p21.4|wu:fi89g10|zgc:56148
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 14582 bases
Position: chr11:18464192-18478773
Accession: ZDB-GENE-030131-6428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000008196	RRM_1	PF00076.22	2.3e-32	1	3
ENSACLP00000008196	RRM_1	PF00076.22	2.3e-32	2	3
ENSACLP00000008196	RRM_1	PF00076.22	2.3e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000008384	-	1953	-	ENSACLP00000008196	650 (aa)	-	-

Gene Model

Click here to download ENSACLG00000005575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000005575's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000005575	rbm12b	72	30.019	ENSACLG00000007675	zgc:153215	99	30.019
ENSACLG00000005575	rbm12b	98	81.748	ENSACLG00000005578	rbm12b	100	81.748

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000005575	rbm12b	90	46.753	ENSG00000183808	RBM12B	99	75.309	Homo_sapiens
ENSACLG00000005575	rbm12b	98	68.082	ENSAPOG00000013963	rbm12b	100	68.082	Acanthochromis_polyacanthus
ENSACLG00000005575	rbm12b	84	45.455	ENSAMEG00000007134	RBM12B	66	45.455	Ailuropoda_melanoleuca
ENSACLG00000005575	rbm12b	85	77.987	ENSACIG00000014943	rbm12b	98	82.550	Amphilophus_citrinellus
ENSACLG00000005575	rbm12b	98	70.126	ENSAOCG00000024270	rbm12b	100	70.126	Amphiprion_ocellaris
ENSACLG00000005575	rbm12b	96	46.926	ENSAPEG00000022079	rbm12b	100	71.104	Amphiprion_percula
ENSACLG00000005575	rbm12b	72	50.617	ENSATEG00000001886	zgc:153215	77	48.864	Anabas_testudineus
ENSACLG00000005575	rbm12b	99	65.581	ENSATEG00000004578	rbm12b	98	65.581	Anabas_testudineus
ENSACLG00000005575	rbm12b	98	38.897	ENSAPLG00000002020	RBM12B	100	39.321	Anas_platyrhynchos
ENSACLG00000005575	rbm12b	95	38.194	ENSACAG00000003463	RBM12B	63	38.194	Anolis_carolinensis
ENSACLG00000005575	rbm12b	88	46.753	ENSANAG00000034015	RBM12B	70	46.753	Aotus_nancymaae
ENSACLG00000005575	rbm12b	98	45.552	ENSAMXG00000041973	rbm12b	100	46.012	Astyanax_mexicanus
ENSACLG00000005575	rbm12b	64	57.143	ENSAMXG00000020853	zgc:153215	69	57.143	Astyanax_mexicanus
ENSACLG00000005575	rbm12b	85	46.753	ENSBTAG00000013408	RBM12B	65	46.753	Bos_taurus
ENSACLG00000005575	rbm12b	84	45.455	ENSCAFG00000009109	RBM12B	57	45.455	Canis_familiaris
ENSACLG00000005575	rbm12b	84	45.455	ENSCAFG00020012203	RBM12B	64	45.455	Canis_lupus_dingo
ENSACLG00000005575	rbm12b	73	40.204	ENSCHIG00000006790	RBM12B	67	40.204	Capra_hircus
ENSACLG00000005575	rbm12b	84	46.753	ENSTSYG00000012515	RBM12B	57	46.753	Carlito_syrichta
ENSACLG00000005575	rbm12b	88	48.052	ENSCAPG00000003543	RBM12B	62	48.052	Cavia_aperea
ENSACLG00000005575	rbm12b	88	48.052	ENSCPOG00000007815	RBM12B	62	48.052	Cavia_porcellus
ENSACLG00000005575	rbm12b	90	46.753	ENSCATG00000030769	RBM12B	70	46.753	Cercocebus_atys
ENSACLG00000005575	rbm12b	88	48.052	ENSCLAG00000017617	RBM12B	62	48.052	Chinchilla_lanigera
ENSACLG00000005575	rbm12b	90	46.753	ENSCSAG00000018559	RBM12B	60	46.753	Chlorocebus_sabaeus
ENSACLG00000005575	rbm12b	82	42.857	ENSCHOG00000008934	RBM12B	58	42.857	Choloepus_hoffmanni
ENSACLG00000005575	rbm12b	98	38.462	ENSCPBG00000003061	RBM12B	100	38.462	Chrysemys_picta_bellii
ENSACLG00000005575	rbm12b	90	46.753	ENSCANG00000030379	RBM12B	69	46.753	Colobus_angolensis_palliatus
ENSACLG00000005575	rbm12b	86	48.052	ENSCGRG00001008710	-	66	48.052	Cricetulus_griseus_chok1gshd
ENSACLG00000005575	rbm12b	99	60.000	ENSCSEG00000004610	rbm12b	99	60.000	Cynoglossus_semilaevis
ENSACLG00000005575	rbm12b	72	35.780	ENSCVAG00000009259	-	99	35.780	Cyprinodon_variegatus
ENSACLG00000005575	rbm12b	98	58.998	ENSCVAG00000011047	rbm12b	100	58.998	Cyprinodon_variegatus
ENSACLG00000005575	rbm12b	98	42.194	ENSDARG00000079717	rbm12b	100	43.058	Danio_rerio
ENSACLG00000005575	rbm12b	84	46.753	ENSDNOG00000041608	RBM12B	56	46.753	Dasypus_novemcinctus
ENSACLG00000005575	rbm12b	84	48.052	ENSDORG00000024034	-	60	48.052	Dipodomys_ordii
ENSACLG00000005575	rbm12b	76	40.157	ENSETEG00000013005	-	69	40.157	Echinops_telfairi
ENSACLG00000005575	rbm12b	84	46.753	ENSEASG00005016297	RBM12B	64	46.753	Equus_asinus_asinus
ENSACLG00000005575	rbm12b	84	46.753	ENSECAG00000017870	RBM12B	58	46.753	Equus_caballus
ENSACLG00000005575	rbm12b	84	46.753	ENSFCAG00000029274	RBM12B	65	46.753	Felis_catus
ENSACLG00000005575	rbm12b	98	36.565	ENSFALG00000014893	RBM12B	100	37.712	Ficedula_albicollis
ENSACLG00000005575	rbm12b	89	48.052	ENSFDAG00000005576	RBM12B	61	48.052	Fukomys_damarensis
ENSACLG00000005575	rbm12b	71	30.152	ENSFHEG00000014539	zgc:153215	96	30.152	Fundulus_heteroclitus
ENSACLG00000005575	rbm12b	98	60.280	ENSFHEG00000016425	rbm12b	100	60.280	Fundulus_heteroclitus
ENSACLG00000005575	rbm12b	97	55.906	ENSGMOG00000013467	rbm12b	100	55.906	Gadus_morhua
ENSACLG00000005575	rbm12b	98	39.062	ENSGALG00000035129	RBM12B	100	39.062	Gallus_gallus
ENSACLG00000005575	rbm12b	98	65.149	ENSGAFG00000007224	rbm12b	100	65.149	Gambusia_affinis
ENSACLG00000005575	rbm12b	98	63.084	ENSGACG00000008682	rbm12b	100	63.084	Gasterosteus_aculeatus
ENSACLG00000005575	rbm12b	98	38.614	ENSGAGG00000009774	RBM12B	100	38.614	Gopherus_agassizii
ENSACLG00000005575	rbm12b	90	46.753	ENSGGOG00000011909	RBM12B	68	46.753	Gorilla_gorilla
ENSACLG00000005575	rbm12b	98	94.190	ENSHBUG00000016227	rbm12b	100	94.190	Haplochromis_burtoni
ENSACLG00000005575	rbm12b	72	46.591	ENSHBUG00000016150	zgc:153215	82	46.591	Haplochromis_burtoni
ENSACLG00000005575	rbm12b	88	48.052	ENSHGLG00000009063	RBM12B	61	48.052	Heterocephalus_glaber_female
ENSACLG00000005575	rbm12b	88	48.052	ENSHGLG00100021324	RBM12B	61	48.052	Heterocephalus_glaber_male
ENSACLG00000005575	rbm12b	98	55.799	ENSHCOG00000014952	rbm12b	100	55.799	Hippocampus_comes
ENSACLG00000005575	rbm12b	99	44.690	ENSIPUG00000001167	RBM12B	99	44.690	Ictalurus_punctatus
ENSACLG00000005575	rbm12b	90	48.052	ENSSTOG00000027445	RBM12B	72	48.052	Ictidomys_tridecemlineatus
ENSACLG00000005575	rbm12b	84	46.753	ENSJJAG00000004165	-	65	46.753	Jaculus_jaculus
ENSACLG00000005575	rbm12b	98	61.466	ENSKMAG00000013704	rbm12b	97	61.466	Kryptolebias_marmoratus
ENSACLG00000005575	rbm12b	98	60.849	ENSKMAG00000013715	rbm12b	100	60.849	Kryptolebias_marmoratus
ENSACLG00000005575	rbm12b	72	30.600	ENSLBEG00000002597	zgc:153215	99	30.600	Labrus_bergylta
ENSACLG00000005575	rbm12b	99	39.149	ENSLACG00000007177	RBM12B	100	40.115	Latimeria_chalumnae
ENSACLG00000005575	rbm12b	98	47.153	ENSLOCG00000018344	rbm12b	100	47.153	Lepisosteus_oculatus
ENSACLG00000005575	rbm12b	85	43.750	ENSLAFG00000029949	RBM12B	67	43.750	Loxodonta_africana
ENSACLG00000005575	rbm12b	90	46.753	ENSMFAG00000045430	RBM12B	69	46.753	Macaca_fascicularis
ENSACLG00000005575	rbm12b	90	46.753	ENSMMUG00000005558	RBM12B	68	46.753	Macaca_mulatta
ENSACLG00000005575	rbm12b	90	46.753	ENSMNEG00000041292	RBM12B	69	46.753	Macaca_nemestrina
ENSACLG00000005575	rbm12b	90	46.753	ENSMLEG00000037288	RBM12B	68	46.753	Mandrillus_leucophaeus
ENSACLG00000005575	rbm12b	98	67.707	ENSMAMG00000011998	rbm12b	100	68.224	Mastacembelus_armatus
ENSACLG00000005575	rbm12b	72	46.591	ENSMZEG00005005435	zgc:153215	79	46.591	Maylandia_zebra
ENSACLG00000005575	rbm12b	98	99.685	ENSMZEG00005015005	rbm12b	100	99.685	Maylandia_zebra
ENSACLG00000005575	rbm12b	98	94.164	ENSMZEG00005014845	rbm12b	99	93.978	Maylandia_zebra
ENSACLG00000005575	rbm12b	73	41.973	ENSMGAG00000011985	RBM12B	99	41.973	Meleagris_gallopavo
ENSACLG00000005575	rbm12b	84	48.052	ENSMAUG00000021752	-	68	48.052	Mesocricetus_auratus
ENSACLG00000005575	rbm12b	90	46.753	ENSMICG00000036969	RBM12B	71	46.753	Microcebus_murinus
ENSACLG00000005575	rbm12b	84	46.753	ENSMOCG00000005603	-	68	46.753	Microtus_ochrogaster
ENSACLG00000005575	rbm12b	98	62.382	ENSMMOG00000002404	rbm12b	95	62.382	Mola_mola
ENSACLG00000005575	rbm12b	72	30.303	ENSMMOG00000003372	zgc:153215	99	30.028	Mola_mola
ENSACLG00000005575	rbm12b	86	44.156	ENSMODG00000007436	RBM12B	84	44.156	Monodelphis_domestica
ENSACLG00000005575	rbm12b	98	64.844	ENSMALG00000012059	rbm12b	100	64.844	Monopterus_albus
ENSACLG00000005575	rbm12b	72	31.524	ENSMALG00000001222	zgc:153215	98	31.524	Monopterus_albus
ENSACLG00000005575	rbm12b	84	50.667	ENSMUSG00000046667	Rbm12b1	67	50.667	Mus_musculus
ENSACLG00000005575	rbm12b	84	49.333	ENSMUSG00000052137	Rbm12b2	67	49.333	Mus_musculus
ENSACLG00000005575	rbm12b	93	39.600	MGP_SPRETEiJ_G0026765	-	67	39.600	Mus_spretus
ENSACLG00000005575	rbm12b	93	39.600	MGP_SPRETEiJ_G0026766	-	73	39.600	Mus_spretus
ENSACLG00000005575	rbm12b	84	46.753	ENSMPUG00000018637	RBM12B	56	46.753	Mustela_putorius_furo
ENSACLG00000005575	rbm12b	84	44.156	ENSMLUG00000002359	RBM12B	59	44.156	Myotis_lucifugus
ENSACLG00000005575	rbm12b	89	45.455	ENSNGAG00000002801	-	64	45.455	Nannospalax_galili
ENSACLG00000005575	rbm12b	98	98.423	ENSNBRG00000015057	rbm12b	100	98.423	Neolamprologus_brichardi
ENSACLG00000005575	rbm12b	72	43.750	ENSNBRG00000013644	zgc:153215	83	43.750	Neolamprologus_brichardi
ENSACLG00000005575	rbm12b	90	46.753	ENSNLEG00000032050	RBM12B	68	46.753	Nomascus_leucogenys
ENSACLG00000005575	rbm12b	88	48.052	ENSODEG00000019204	RBM12B	62	48.052	Octodon_degus
ENSACLG00000005575	rbm12b	98	95.741	ENSONIG00000020612	rbm12b	100	95.741	Oreochromis_niloticus
ENSACLG00000005575	rbm12b	99	37.589	ENSOANG00000015735	-	99	38.582	Ornithorhynchus_anatinus
ENSACLG00000005575	rbm12b	84	46.753	ENSOCUG00000010353	RBM12B	65	46.753	Oryctolagus_cuniculus
ENSACLG00000005575	rbm12b	98	62.578	ENSORLG00000008228	rbm12b	98	62.578	Oryzias_latipes
ENSACLG00000005575	rbm12b	98	63.043	ENSORLG00020013619	rbm12b	98	63.043	Oryzias_latipes_hni
ENSACLG00000005575	rbm12b	98	62.888	ENSORLG00015019999	rbm12b	98	62.888	Oryzias_latipes_hsok
ENSACLG00000005575	rbm12b	98	64.286	ENSOMEG00000022523	rbm12b	98	64.286	Oryzias_melastigma
ENSACLG00000005575	rbm12b	97	46.753	ENSOGAG00000002979	RBM12B	66	46.753	Otolemur_garnettii
ENSACLG00000005575	rbm12b	98	46.753	ENSPTIG00000020071	RBM12B	77	46.753	Panthera_tigris_altaica
ENSACLG00000005575	rbm12b	90	46.753	ENSPTRG00000020420	RBM12B	68	46.753	Pan_troglodytes
ENSACLG00000005575	rbm12b	90	46.753	ENSPANG00000035535	RBM12B	68	46.753	Papio_anubis
ENSACLG00000005575	rbm12b	99	49.627	ENSPKIG00000018719	rbm12b	99	49.925	Paramormyrops_kingsleyae
ENSACLG00000005575	rbm12b	72	33.855	ENSPKIG00000014851	zgc:153215	99	33.855	Paramormyrops_kingsleyae
ENSACLG00000005575	rbm12b	98	37.955	ENSPSIG00000001348	RBM12B	100	37.955	Pelodiscus_sinensis
ENSACLG00000005575	rbm12b	65	51.692	ENSPMGG00000012348	-	97	51.692	Periophthalmus_magnuspinnatus
ENSACLG00000005575	rbm12b	84	48.052	ENSPEMG00000008279	-	67	48.052	Peromyscus_maniculatus_bairdii
ENSACLG00000005575	rbm12b	84	44.156	ENSPCIG00000008556	RBM12B	78	44.156	Phascolarctos_cinereus
ENSACLG00000005575	rbm12b	99	64.186	ENSPFOG00000020937	rbm12b	98	64.186	Poecilia_formosa
ENSACLG00000005575	rbm12b	72	42.143	ENSPFOG00000017451	zgc:153215	77	42.143	Poecilia_formosa
ENSACLG00000005575	rbm12b	98	64.992	ENSPLAG00000018782	rbm12b	100	64.992	Poecilia_latipinna
ENSACLG00000005575	rbm12b	98	65.463	ENSPMEG00000011418	rbm12b	100	65.463	Poecilia_mexicana
ENSACLG00000005575	rbm12b	98	64.678	ENSPREG00000020770	rbm12b	100	64.678	Poecilia_reticulata
ENSACLG00000005575	rbm12b	84	46.753	ENSPPYG00000018745	RBM12B	56	46.753	Pongo_abelii
ENSACLG00000005575	rbm12b	84	45.455	ENSPCOG00000023546	RBM12B	65	45.455	Propithecus_coquereli
ENSACLG00000005575	rbm12b	84	46.753	ENSPVAG00000011803	RBM12B	61	46.753	Pteropus_vampyrus
ENSACLG00000005575	rbm12b	98	99.054	ENSPNYG00000016696	rbm12b	100	99.054	Pundamilia_nyererei
ENSACLG00000005575	rbm12b	99	45.697	ENSPNAG00000008126	rbm12b	98	47.361	Pygocentrus_nattereri
ENSACLG00000005575	rbm12b	66	52.041	ENSPNAG00000025628	zgc:153215	77	52.041	Pygocentrus_nattereri
ENSACLG00000005575	rbm12b	84	49.333	ENSRNOG00000016330	Rbm12b	67	49.333	Rattus_norvegicus
ENSACLG00000005575	rbm12b	72	40.081	ENSRNOG00000055292	LOC679087	65	40.081	Rattus_norvegicus
ENSACLG00000005575	rbm12b	90	46.753	ENSRBIG00000035046	RBM12B	68	46.753	Rhinopithecus_bieti
ENSACLG00000005575	rbm12b	90	46.753	ENSRROG00000023660	RBM12B	71	46.753	Rhinopithecus_roxellana
ENSACLG00000005575	rbm12b	90	46.753	ENSSBOG00000027592	RBM12B	68	46.753	Saimiri_boliviensis_boliviensis
ENSACLG00000005575	rbm12b	84	44.156	ENSSHAG00000015335	RBM12B	78	44.156	Sarcophilus_harrisii
ENSACLG00000005575	rbm12b	98	48.301	ENSSFOG00015001584	rbm12b	100	48.892	Scleropages_formosus
ENSACLG00000005575	rbm12b	72	34.510	ENSSFOG00015009427	zgc:153215	99	34.510	Scleropages_formosus
ENSACLG00000005575	rbm12b	72	30.876	ENSSMAG00000019013	zgc:153215	96	30.876	Scophthalmus_maximus
ENSACLG00000005575	rbm12b	98	67.712	ENSSMAG00000019708	rbm12b	100	67.712	Scophthalmus_maximus
ENSACLG00000005575	rbm12b	98	69.113	ENSSDUG00000006856	rbm12b	100	69.113	Seriola_dumerili
ENSACLG00000005575	rbm12b	72	53.086	ENSSLDG00000013581	zgc:153215	77	51.136	Seriola_lalandi_dorsalis
ENSACLG00000005575	rbm12b	98	69.419	ENSSLDG00000016156	rbm12b	100	69.419	Seriola_lalandi_dorsalis
ENSACLG00000005575	rbm12b	73	40.519	ENSSARG00000011845	-	67	40.519	Sorex_araneus
ENSACLG00000005575	rbm12b	74	38.667	ENSSPUG00000016954	RBM12B	92	38.667	Sphenodon_punctatus
ENSACLG00000005575	rbm12b	98	70.440	ENSSPAG00000006774	rbm12b	100	70.440	Stegastes_partitus
ENSACLG00000005575	rbm12b	72	31.838	ENSSPAG00000023584	zgc:153215	98	31.838	Stegastes_partitus
ENSACLG00000005575	rbm12b	85	45.333	ENSSSCG00000006110	RBM12B	57	45.333	Sus_scrofa
ENSACLG00000005575	rbm12b	72	41.165	ENSTGUG00000011860	RBM12B	96	41.165	Taeniopygia_guttata
ENSACLG00000005575	rbm12b	98	58.110	ENSTRUG00000013738	rbm12b	100	58.110	Takifugu_rubripes
ENSACLG00000005575	rbm12b	76	38.417	ENSTBEG00000000449	RBM12B	66	38.417	Tupaia_belangeri
ENSACLG00000005575	rbm12b	84	46.753	ENSUAMG00000023639	RBM12B	64	46.753	Ursus_americanus
ENSACLG00000005575	rbm12b	84	46.753	ENSUMAG00000016008	RBM12B	61	46.753	Ursus_maritimus
ENSACLG00000005575	rbm12b	89	45.455	ENSVVUG00000002694	RBM12B	68	45.455	Vulpes_vulpes
ENSACLG00000005575	rbm12b	88	31.732	ENSXETG00000014696	rbm12b	80	31.732	Xenopus_tropicalis
ENSACLG00000005575	rbm12b	98	34.802	ENSXETG00000014694	rbm12b	100	37.630	Xenopus_tropicalis
ENSACLG00000005575	rbm12b	60	38.636	ENSXMAG00000013169	-	96	38.636	Xiphophorus_maculatus
ENSACLG00000005575	rbm12b	98	65.149	ENSXMAG00000014213	rbm12b	100	65.149	Xiphophorus_maculatus