EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000005578 (Gene tree)
Gene ID: -
Gene Symbol: rbm12b (1 of many)
Alias: fi89g10|si:ch211-193p21.4|wu:fi89g10|zgc:56148
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 1906 bases
Position: chr11:18470482-18472387
Accession: ZDB-GENE-030131-6428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000008216	RRM_1	PF00076.22	4.1e-19	1	2
ENSACLP00000008216	RRM_1	PF00076.22	4.1e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000008403	-	1179	-	ENSACLP00000008216	392 (aa)	-	-

Gene Model

Click here to download ENSACLG00000005578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000005578's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000005578	rbm12b	63	31.973	ENSACLG00000007675	zgc:153215	93	31.973
ENSACLG00000005578	rbm12b	100	81.748	ENSACLG00000005575	rbm12b	98	81.748

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000005578	rbm12b	87	46.753	ENSG00000183808	RBM12B	99	72.840	Homo_sapiens
ENSACLG00000005578	rbm12b	100	54.242	ENSAPOG00000013963	rbm12b	100	54.242	Acanthochromis_polyacanthus
ENSACLG00000005578	rbm12b	57	55.405	ENSAPOG00000008836	zgc:153215	84	55.405	Acanthochromis_polyacanthus
ENSACLG00000005578	rbm12b	78	45.455	ENSAMEG00000007134	RBM12B	61	45.455	Ailuropoda_melanoleuca
ENSACLG00000005578	rbm12b	57	51.250	ENSACIG00000013317	zgc:153215	54	51.250	Amphilophus_citrinellus
ENSACLG00000005578	rbm12b	54	93.939	ENSACIG00000014943	rbm12b	76	82.000	Amphilophus_citrinellus
ENSACLG00000005578	rbm12b	100	56.298	ENSAOCG00000024270	rbm12b	100	56.298	Amphiprion_ocellaris
ENSACLG00000005578	rbm12b	57	31.452	ENSAOCG00000010819	zgc:153215	86	31.873	Amphiprion_ocellaris
ENSACLG00000005578	rbm12b	98	47.917	ENSAPEG00000022079	rbm12b	97	47.917	Amphiprion_percula
ENSACLG00000005578	rbm12b	57	49.383	ENSATEG00000001886	zgc:153215	52	47.727	Anabas_testudineus
ENSACLG00000005578	rbm12b	100	53.985	ENSATEG00000004578	rbm12b	97	53.985	Anabas_testudineus
ENSACLG00000005578	rbm12b	100	37.698	ENSAPLG00000002020	RBM12B	100	32.151	Anas_platyrhynchos
ENSACLG00000005578	rbm12b	100	38.194	ENSACAG00000003463	RBM12B	66	38.194	Anolis_carolinensis
ENSACLG00000005578	rbm12b	84	46.753	ENSANAG00000034015	RBM12B	67	46.753	Aotus_nancymaae
ENSACLG00000005578	rbm12b	100	44.672	ENSAMXG00000041973	rbm12b	93	44.672	Astyanax_mexicanus
ENSACLG00000005578	rbm12b	79	46.753	ENSBTAG00000013408	RBM12B	61	46.753	Bos_taurus
ENSACLG00000005578	rbm12b	78	45.455	ENSCAFG00000009109	RBM12B	52	45.455	Canis_familiaris
ENSACLG00000005578	rbm12b	86	45.455	ENSCAFG00020012203	RBM12B	62	45.455	Canis_lupus_dingo
ENSACLG00000005578	rbm12b	60	39.600	ENSCHIG00000006790	RBM12B	62	39.600	Capra_hircus
ENSACLG00000005578	rbm12b	86	46.753	ENSTSYG00000012515	RBM12B	56	46.753	Carlito_syrichta
ENSACLG00000005578	rbm12b	84	48.052	ENSCAPG00000003543	RBM12B	57	48.052	Cavia_aperea
ENSACLG00000005578	rbm12b	84	48.052	ENSCPOG00000007815	RBM12B	57	48.052	Cavia_porcellus
ENSACLG00000005578	rbm12b	87	46.753	ENSCATG00000030769	RBM12B	66	46.753	Cercocebus_atys
ENSACLG00000005578	rbm12b	84	48.052	ENSCLAG00000017617	RBM12B	59	48.052	Chinchilla_lanigera
ENSACLG00000005578	rbm12b	87	46.753	ENSCSAG00000018559	RBM12B	57	46.753	Chlorocebus_sabaeus
ENSACLG00000005578	rbm12b	78	42.857	ENSCHOG00000008934	RBM12B	55	42.857	Choloepus_hoffmanni
ENSACLG00000005578	rbm12b	100	32.311	ENSCPBG00000003061	RBM12B	100	32.311	Chrysemys_picta_bellii
ENSACLG00000005578	rbm12b	87	46.753	ENSCANG00000030379	RBM12B	66	46.753	Colobus_angolensis_palliatus
ENSACLG00000005578	rbm12b	82	48.052	ENSCGRG00001008710	-	62	48.052	Cricetulus_griseus_chok1gshd
ENSACLG00000005578	rbm12b	100	47.458	ENSCSEG00000004610	rbm12b	97	47.458	Cynoglossus_semilaevis
ENSACLG00000005578	rbm12b	59	31.667	ENSCSEG00000001575	-	99	31.667	Cynoglossus_semilaevis
ENSACLG00000005578	rbm12b	100	52.174	ENSCVAG00000011047	rbm12b	100	52.174	Cyprinodon_variegatus
ENSACLG00000005578	rbm12b	57	47.368	ENSDARG00000055889	zgc:153215	50	47.368	Danio_rerio
ENSACLG00000005578	rbm12b	100	44.033	ENSDARG00000079717	rbm12b	91	44.033	Danio_rerio
ENSACLG00000005578	rbm12b	82	46.753	ENSDNOG00000041608	RBM12B	53	46.753	Dasypus_novemcinctus
ENSACLG00000005578	rbm12b	78	48.052	ENSDORG00000024034	-	59	48.052	Dipodomys_ordii
ENSACLG00000005578	rbm12b	64	40.708	ENSETEG00000013005	-	61	40.708	Echinops_telfairi
ENSACLG00000005578	rbm12b	55	39.189	ENSEBUG00000010930	-	55	39.189	Eptatretus_burgeri
ENSACLG00000005578	rbm12b	82	46.753	ENSEASG00005016297	RBM12B	61	46.753	Equus_asinus_asinus
ENSACLG00000005578	rbm12b	82	46.753	ENSECAG00000017870	RBM12B	55	46.753	Equus_caballus
ENSACLG00000005578	rbm12b	57	60.000	ENSELUG00000009039	zgc:153215	54	48.649	Esox_lucius
ENSACLG00000005578	rbm12b	78	46.753	ENSFCAG00000029274	RBM12B	60	46.753	Felis_catus
ENSACLG00000005578	rbm12b	100	36.879	ENSFALG00000014893	RBM12B	100	31.463	Ficedula_albicollis
ENSACLG00000005578	rbm12b	84	48.052	ENSFDAG00000005576	RBM12B	58	48.052	Fukomys_damarensis
ENSACLG00000005578	rbm12b	100	50.633	ENSFHEG00000016425	rbm12b	100	50.633	Fundulus_heteroclitus
ENSACLG00000005578	rbm12b	99	51.090	ENSGMOG00000013467	rbm12b	86	51.090	Gadus_morhua
ENSACLG00000005578	rbm12b	100	37.234	ENSGALG00000035129	RBM12B	92	38.340	Gallus_gallus
ENSACLG00000005578	rbm12b	55	41.892	ENSGAFG00000007845	zgc:153215	53	41.892	Gambusia_affinis
ENSACLG00000005578	rbm12b	100	59.599	ENSGAFG00000007224	rbm12b	100	59.599	Gambusia_affinis
ENSACLG00000005578	rbm12b	100	52.405	ENSGACG00000008682	rbm12b	100	52.405	Gasterosteus_aculeatus
ENSACLG00000005578	rbm12b	100	36.434	ENSGAGG00000009774	RBM12B	92	36.434	Gopherus_agassizii
ENSACLG00000005578	rbm12b	87	46.753	ENSGGOG00000011909	RBM12B	65	46.753	Gorilla_gorilla
ENSACLG00000005578	rbm12b	100	74.083	ENSHBUG00000016227	rbm12b	100	74.083	Haplochromis_burtoni
ENSACLG00000005578	rbm12b	57	33.129	ENSHBUG00000016150	zgc:153215	65	33.129	Haplochromis_burtoni
ENSACLG00000005578	rbm12b	84	48.052	ENSHGLG00000009063	RBM12B	58	48.052	Heterocephalus_glaber_female
ENSACLG00000005578	rbm12b	84	48.052	ENSHGLG00100021324	RBM12B	58	48.052	Heterocephalus_glaber_male
ENSACLG00000005578	rbm12b	100	44.730	ENSHCOG00000014952	rbm12b	100	44.730	Hippocampus_comes
ENSACLG00000005578	rbm12b	57	56.790	ENSIPUG00000019731	zgc:153215	76	56.790	Ictalurus_punctatus
ENSACLG00000005578	rbm12b	100	42.320	ENSIPUG00000001167	RBM12B	97	42.320	Ictalurus_punctatus
ENSACLG00000005578	rbm12b	87	48.052	ENSSTOG00000027445	RBM12B	68	48.052	Ictidomys_tridecemlineatus
ENSACLG00000005578	rbm12b	78	46.753	ENSJJAG00000004165	-	60	46.753	Jaculus_jaculus
ENSACLG00000005578	rbm12b	100	52.442	ENSKMAG00000013715	rbm12b	100	52.442	Kryptolebias_marmoratus
ENSACLG00000005578	rbm12b	100	52.442	ENSKMAG00000013704	rbm12b	97	52.442	Kryptolebias_marmoratus
ENSACLG00000005578	rbm12b	57	35.023	ENSLBEG00000002597	zgc:153215	99	34.562	Labrus_bergylta
ENSACLG00000005578	rbm12b	100	31.807	ENSLACG00000007177	RBM12B	100	32.850	Latimeria_chalumnae
ENSACLG00000005578	rbm12b	100	37.561	ENSLOCG00000018344	rbm12b	100	37.931	Lepisosteus_oculatus
ENSACLG00000005578	rbm12b	79	43.750	ENSLAFG00000029949	RBM12B	61	43.750	Loxodonta_africana
ENSACLG00000005578	rbm12b	87	46.753	ENSMFAG00000045430	RBM12B	66	46.753	Macaca_fascicularis
ENSACLG00000005578	rbm12b	87	46.753	ENSMMUG00000005558	RBM12B	65	46.753	Macaca_mulatta
ENSACLG00000005578	rbm12b	87	46.753	ENSMNEG00000041292	RBM12B	66	46.753	Macaca_nemestrina
ENSACLG00000005578	rbm12b	87	46.753	ENSMLEG00000037288	RBM12B	65	46.753	Mandrillus_leucophaeus
ENSACLG00000005578	rbm12b	97	50.000	ENSMAMG00000012038	zgc:153215	79	50.000	Mastacembelus_armatus
ENSACLG00000005578	rbm12b	100	54.684	ENSMAMG00000011998	rbm12b	90	55.471	Mastacembelus_armatus
ENSACLG00000005578	rbm12b	100	82.005	ENSMZEG00005015005	rbm12b	100	82.005	Maylandia_zebra
ENSACLG00000005578	rbm12b	57	38.346	ENSMZEG00005005435	zgc:153215	59	38.346	Maylandia_zebra
ENSACLG00000005578	rbm12b	100	95.192	ENSMZEG00005014845	rbm12b	99	94.822	Maylandia_zebra
ENSACLG00000005578	rbm12b	59	38.776	ENSMGAG00000011985	RBM12B	86	38.776	Meleagris_gallopavo
ENSACLG00000005578	rbm12b	84	48.052	ENSMAUG00000021752	-	67	48.052	Mesocricetus_auratus
ENSACLG00000005578	rbm12b	87	46.753	ENSMICG00000036969	RBM12B	65	46.753	Microcebus_murinus
ENSACLG00000005578	rbm12b	82	46.753	ENSMOCG00000005603	-	64	46.753	Microtus_ochrogaster
ENSACLG00000005578	rbm12b	99	53.846	ENSMMOG00000002404	rbm12b	94	53.846	Mola_mola
ENSACLG00000005578	rbm12b	100	44.156	ENSMODG00000007436	RBM12B	76	44.156	Monodelphis_domestica
ENSACLG00000005578	rbm12b	57	37.647	ENSMALG00000001222	zgc:153215	97	37.647	Monopterus_albus
ENSACLG00000005578	rbm12b	100	53.015	ENSMALG00000012059	rbm12b	100	53.015	Monopterus_albus
ENSACLG00000005578	rbm12b	81	50.667	ENSMUSG00000046667	Rbm12b1	64	50.667	Mus_musculus
ENSACLG00000005578	rbm12b	81	49.333	ENSMUSG00000052137	Rbm12b2	64	49.333	Mus_musculus
ENSACLG00000005578	rbm12b	96	38.406	MGP_SPRETEiJ_G0026765	-	64	38.406	Mus_spretus
ENSACLG00000005578	rbm12b	96	38.406	MGP_SPRETEiJ_G0026766	-	70	38.406	Mus_spretus
ENSACLG00000005578	rbm12b	79	46.753	ENSMPUG00000018637	RBM12B	52	46.753	Mustela_putorius_furo
ENSACLG00000005578	rbm12b	78	44.156	ENSMLUG00000002359	RBM12B	54	44.156	Myotis_lucifugus
ENSACLG00000005578	rbm12b	86	45.455	ENSNGAG00000002801	-	61	45.455	Nannospalax_galili
ENSACLG00000005578	rbm12b	100	80.412	ENSNBRG00000015057	rbm12b	100	80.412	Neolamprologus_brichardi
ENSACLG00000005578	rbm12b	57	36.806	ENSNBRG00000013644	zgc:153215	61	36.806	Neolamprologus_brichardi
ENSACLG00000005578	rbm12b	87	46.753	ENSNLEG00000032050	RBM12B	65	46.753	Nomascus_leucogenys
ENSACLG00000005578	rbm12b	84	48.052	ENSODEG00000019204	RBM12B	59	48.052	Octodon_degus
ENSACLG00000005578	rbm12b	100	39.231	ENSONIG00000006054	zgc:153215	99	31.667	Oreochromis_niloticus
ENSACLG00000005578	rbm12b	100	78.608	ENSONIG00000020612	rbm12b	100	78.608	Oreochromis_niloticus
ENSACLG00000005578	rbm12b	100	36.328	ENSOANG00000015735	-	91	36.719	Ornithorhynchus_anatinus
ENSACLG00000005578	rbm12b	82	46.753	ENSOCUG00000010353	RBM12B	63	46.753	Oryctolagus_cuniculus
ENSACLG00000005578	rbm12b	100	53.788	ENSORLG00000008228	rbm12b	97	53.788	Oryzias_latipes
ENSACLG00000005578	rbm12b	100	54.293	ENSORLG00020013619	rbm12b	97	54.293	Oryzias_latipes_hni
ENSACLG00000005578	rbm12b	100	54.040	ENSORLG00015019999	rbm12b	97	54.040	Oryzias_latipes_hsok
ENSACLG00000005578	rbm12b	60	32.093	ENSOMEG00000004220	zgc:153215	89	32.258	Oryzias_melastigma
ENSACLG00000005578	rbm12b	100	52.806	ENSOMEG00000022523	rbm12b	89	52.806	Oryzias_melastigma
ENSACLG00000005578	rbm12b	99	46.753	ENSOGAG00000002979	RBM12B	61	46.753	Otolemur_garnettii
ENSACLG00000005578	rbm12b	100	46.753	ENSPTIG00000020071	RBM12B	72	46.753	Panthera_tigris_altaica
ENSACLG00000005578	rbm12b	87	46.753	ENSPTRG00000020420	RBM12B	65	46.753	Pan_troglodytes
ENSACLG00000005578	rbm12b	87	46.753	ENSPANG00000035535	RBM12B	65	46.753	Papio_anubis
ENSACLG00000005578	rbm12b	97	33.195	ENSPKIG00000014851	zgc:153215	99	33.195	Paramormyrops_kingsleyae
ENSACLG00000005578	rbm12b	100	47.896	ENSPKIG00000018719	rbm12b	97	48.544	Paramormyrops_kingsleyae
ENSACLG00000005578	rbm12b	100	35.714	ENSPSIG00000001348	RBM12B	95	35.714	Pelodiscus_sinensis
ENSACLG00000005578	rbm12b	85	35.277	ENSPMGG00000012348	-	89	35.277	Periophthalmus_magnuspinnatus
ENSACLG00000005578	rbm12b	78	48.052	ENSPEMG00000008279	-	61	48.052	Peromyscus_maniculatus_bairdii
ENSACLG00000005578	rbm12b	78	44.156	ENSPCIG00000008556	RBM12B	63	44.156	Phascolarctos_cinereus
ENSACLG00000005578	rbm12b	100	59.599	ENSPFOG00000020937	rbm12b	97	59.599	Poecilia_formosa
ENSACLG00000005578	rbm12b	100	59.599	ENSPLAG00000018782	rbm12b	100	59.599	Poecilia_latipinna
ENSACLG00000005578	rbm12b	100	60.172	ENSPMEG00000011418	rbm12b	100	60.172	Poecilia_mexicana
ENSACLG00000005578	rbm12b	100	54.872	ENSPREG00000020770	rbm12b	100	54.872	Poecilia_reticulata
ENSACLG00000005578	rbm12b	82	46.753	ENSPPYG00000018745	RBM12B	54	46.753	Pongo_abelii
ENSACLG00000005578	rbm12b	82	45.455	ENSPCOG00000023546	RBM12B	61	45.455	Propithecus_coquereli
ENSACLG00000005578	rbm12b	82	46.753	ENSPVAG00000011803	RBM12B	58	46.753	Pteropus_vampyrus
ENSACLG00000005578	rbm12b	100	80.670	ENSPNYG00000016696	rbm12b	100	80.670	Pundamilia_nyererei
ENSACLG00000005578	rbm12b	100	42.683	ENSPNAG00000008126	rbm12b	87	42.683	Pygocentrus_nattereri
ENSACLG00000005578	rbm12b	57	57.143	ENSPNAG00000025628	zgc:153215	50	57.143	Pygocentrus_nattereri
ENSACLG00000005578	rbm12b	58	38.750	ENSRNOG00000055292	LOC679087	59	38.750	Rattus_norvegicus
ENSACLG00000005578	rbm12b	77	49.333	ENSRNOG00000016330	Rbm12b	61	49.333	Rattus_norvegicus
ENSACLG00000005578	rbm12b	87	46.753	ENSRBIG00000035046	RBM12B	65	46.753	Rhinopithecus_bieti
ENSACLG00000005578	rbm12b	87	46.753	ENSRROG00000023660	RBM12B	68	46.753	Rhinopithecus_roxellana
ENSACLG00000005578	rbm12b	87	46.753	ENSSBOG00000027592	RBM12B	65	46.753	Saimiri_boliviensis_boliviensis
ENSACLG00000005578	rbm12b	100	44.156	ENSSHAG00000015335	RBM12B	78	44.156	Sarcophilus_harrisii
ENSACLG00000005578	rbm12b	100	44.959	ENSSFOG00015001584	rbm12b	86	45.504	Scleropages_formosus
ENSACLG00000005578	rbm12b	57	34.199	ENSSFOG00015009427	zgc:153215	86	34.199	Scleropages_formosus
ENSACLG00000005578	rbm12b	57	53.571	ENSSMAG00000019013	zgc:153215	80	53.571	Scophthalmus_maximus
ENSACLG00000005578	rbm12b	100	54.499	ENSSMAG00000019708	rbm12b	100	54.499	Scophthalmus_maximus
ENSACLG00000005578	rbm12b	100	57.494	ENSSDUG00000006856	rbm12b	100	57.494	Seriola_dumerili
ENSACLG00000005578	rbm12b	57	51.852	ENSSLDG00000013581	zgc:153215	84	37.589	Seriola_lalandi_dorsalis
ENSACLG00000005578	rbm12b	100	57.740	ENSSLDG00000016156	rbm12b	100	57.740	Seriola_lalandi_dorsalis
ENSACLG00000005578	rbm12b	95	32.732	ENSSARG00000011845	-	67	32.732	Sorex_araneus
ENSACLG00000005578	rbm12b	60	36.822	ENSSPUG00000016954	RBM12B	92	32.618	Sphenodon_punctatus
ENSACLG00000005578	rbm12b	100	57.841	ENSSPAG00000006774	rbm12b	100	57.841	Stegastes_partitus
ENSACLG00000005578	rbm12b	77	45.333	ENSSSCG00000006110	RBM12B	52	45.333	Sus_scrofa
ENSACLG00000005578	rbm12b	96	31.538	ENSTGUG00000011860	RBM12B	96	31.538	Taeniopygia_guttata
ENSACLG00000005578	rbm12b	100	50.129	ENSTRUG00000013738	rbm12b	94	50.129	Takifugu_rubripes
ENSACLG00000005578	rbm12b	85	34.957	ENSTBEG00000000449	RBM12B	66	34.957	Tupaia_belangeri
ENSACLG00000005578	rbm12b	78	46.753	ENSUAMG00000023639	RBM12B	58	46.753	Ursus_americanus
ENSACLG00000005578	rbm12b	78	46.753	ENSUMAG00000016008	RBM12B	56	46.753	Ursus_maritimus
ENSACLG00000005578	rbm12b	86	45.455	ENSVVUG00000002694	RBM12B	62	45.455	Vulpes_vulpes
ENSACLG00000005578	rbm12b	95	34.568	ENSXETG00000025920	-	96	34.568	Xenopus_tropicalis
ENSACLG00000005578	rbm12b	100	39.163	ENSXETG00000014694	rbm12b	100	39.344	Xenopus_tropicalis
ENSACLG00000005578	rbm12b	72	34.211	ENSXETG00000014696	rbm12b	75	34.211	Xenopus_tropicalis
ENSACLG00000005578	rbm12b	83	39.222	ENSXCOG00000019735	-	90	40.122	Xiphophorus_couchianus
ENSACLG00000005578	rbm12b	100	54.103	ENSXMAG00000014213	rbm12b	100	54.103	Xiphophorus_maculatus