EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000005694 (Gene tree)
Gene ID: 113024529
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 6328 bases
Position: chr6:31337258-31343585
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000008376	zf-C2H2	PF00096.26	5.3e-33	1	7
ENSACLP00000008376	zf-C2H2	PF00096.26	5.3e-33	2	7
ENSACLP00000008376	zf-C2H2	PF00096.26	5.3e-33	3	7
ENSACLP00000008376	zf-C2H2	PF00096.26	5.3e-33	4	7
ENSACLP00000008376	zf-C2H2	PF00096.26	5.3e-33	5	7
ENSACLP00000008376	zf-C2H2	PF00096.26	5.3e-33	6	7
ENSACLP00000008376	zf-C2H2	PF00096.26	5.3e-33	7	7
ENSACLP00000008386	zf-C2H2	PF00096.26	1.4e-23	1	5
ENSACLP00000008386	zf-C2H2	PF00096.26	1.4e-23	2	5
ENSACLP00000008386	zf-C2H2	PF00096.26	1.4e-23	3	5
ENSACLP00000008386	zf-C2H2	PF00096.26	1.4e-23	4	5
ENSACLP00000008386	zf-C2H2	PF00096.26	1.4e-23	5	5
ENSACLP00000008376	zf-met	PF12874.7	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000008563	-	2536	-	ENSACLP00000008376	523 (aa)	-	-
ENSACLT00000008578	-	2216	-	ENSACLP00000008386	416 (aa)	-	-

Gene Model

Click here to download ENSACLG00000005694's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000005694's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000005694	-	55	37.569	ENSACLG00000006702	-	74	37.569
ENSACLG00000005694	-	55	43.636	ENSACLG00000008821	-	94	43.636
ENSACLG00000005694	-	57	41.150	ENSACLG00000025251	-	94	41.714
ENSACLG00000005694	-	50	42.945	ENSACLG00000007888	-	76	42.945
ENSACLG00000005694	-	63	40.127	ENSACLG00000017941	-	67	40.127
ENSACLG00000005694	-	54	39.865	ENSACLG00000026130	-	51	39.865
ENSACLG00000005694	-	51	40.805	ENSACLG00000015816	-	94	40.496
ENSACLG00000005694	-	50	33.613	ENSACLG00000017449	-	59	36.296
ENSACLG00000005694	-	55	36.842	ENSACLG00000020339	-	60	39.912
ENSACLG00000005694	-	54	39.916	ENSACLG00000014365	-	98	39.916
ENSACLG00000005694	-	56	39.394	ENSACLG00000018746	-	96	38.136
ENSACLG00000005694	-	50	41.250	ENSACLG00000019291	-	88	41.250
ENSACLG00000005694	-	55	39.583	ENSACLG00000023513	-	87	39.583
ENSACLG00000005694	-	51	34.862	ENSACLG00000022287	-	65	34.862
ENSACLG00000005694	-	51	34.969	ENSACLG00000000521	-	91	35.032
ENSACLG00000005694	-	60	39.645	ENSACLG00000000487	-	93	39.645
ENSACLG00000005694	-	56	39.634	ENSACLG00000022302	-	98	44.156
ENSACLG00000005694	-	54	41.045	ENSACLG00000027424	-	69	41.045
ENSACLG00000005694	-	64	41.414	ENSACLG00000019318	-	97	45.455
ENSACLG00000005694	-	52	40.367	ENSACLG00000026703	-	70	44.099
ENSACLG00000005694	-	50	42.336	ENSACLG00000020333	-	52	42.336
ENSACLG00000005694	-	54	41.667	ENSACLG00000024294	-	80	42.857
ENSACLG00000005694	-	51	39.583	ENSACLG00000011239	-	70	39.583
ENSACLG00000005694	-	50	42.029	ENSACLG00000021184	-	54	42.029
ENSACLG00000005694	-	68	42.857	ENSACLG00000023963	-	99	42.857
ENSACLG00000005694	-	51	42.958	ENSACLG00000013935	-	91	42.958
ENSACLG00000005694	-	51	41.912	ENSACLG00000020260	-	99	42.236
ENSACLG00000005694	-	50	40.761	ENSACLG00000022505	-	83	42.446
ENSACLG00000005694	-	51	41.081	ENSACLG00000006528	-	98	39.450
ENSACLG00000005694	-	67	37.791	ENSACLG00000006870	-	75	37.791
ENSACLG00000005694	-	51	44.915	ENSACLG00000024957	-	91	44.915
ENSACLG00000005694	-	50	42.336	ENSACLG00000015843	-	98	39.521
ENSACLG00000005694	-	50	40.940	ENSACLG00000023979	-	97	41.429
ENSACLG00000005694	-	51	43.796	ENSACLG00000017321	-	73	40.805
ENSACLG00000005694	-	68	38.889	ENSACLG00000012046	-	76	38.889
ENSACLG00000005694	-	56	34.259	ENSACLG00000005594	ZNF319	87	34.259
ENSACLG00000005694	-	68	36.111	ENSACLG00000016405	zbtb17	70	36.090
ENSACLG00000005694	-	51	40.278	ENSACLG00000000411	-	89	40.278
ENSACLG00000005694	-	60	44.720	ENSACLG00000021056	-	77	44.720
ENSACLG00000005694	-	52	42.857	ENSACLG00000003229	-	92	42.857
ENSACLG00000005694	-	58	43.478	ENSACLG00000001045	-	100	43.478
ENSACLG00000005694	-	52	44.693	ENSACLG00000024491	-	84	44.693
ENSACLG00000005694	-	51	42.857	ENSACLG00000007749	-	76	42.857
ENSACLG00000005694	-	56	39.873	ENSACLG00000027692	-	81	39.873
ENSACLG00000005694	-	52	47.541	ENSACLG00000011237	-	98	43.284
ENSACLG00000005694	-	62	39.752	ENSACLG00000023941	-	91	39.752
ENSACLG00000005694	-	73	41.615	ENSACLG00000020393	-	99	42.236
ENSACLG00000005694	-	52	40.000	ENSACLG00000021045	-	88	40.000
ENSACLG00000005694	-	56	39.766	ENSACLG00000017487	-	75	39.766
ENSACLG00000005694	-	68	42.857	ENSACLG00000015462	-	84	42.857
ENSACLG00000005694	-	52	43.396	ENSACLG00000017411	-	88	43.396
ENSACLG00000005694	-	51	37.190	ENSACLG00000012712	znf646	72	37.190
ENSACLG00000005694	-	52	37.580	ENSACLG00000019499	-	90	40.741
ENSACLG00000005694	-	50	38.931	ENSACLG00000018716	-	73	38.931
ENSACLG00000005694	-	55	42.342	ENSACLG00000010811	-	50	42.342
ENSACLG00000005694	-	58	40.909	ENSACLG00000003332	-	98	41.379
ENSACLG00000005694	-	50	38.158	ENSACLG00000001507	-	74	39.888
ENSACLG00000005694	-	58	42.857	ENSACLG00000024308	-	97	43.333
ENSACLG00000005694	-	51	35.246	ENSACLG00000015989	-	86	39.881
ENSACLG00000005694	-	55	41.398	ENSACLG00000023305	-	84	41.398
ENSACLG00000005694	-	52	43.478	ENSACLG00000024647	-	69	43.478
ENSACLG00000005694	-	53	33.588	ENSACLG00000006697	-	76	33.588
ENSACLG00000005694	-	63	42.857	ENSACLG00000025163	-	99	42.857
ENSACLG00000005694	-	53	35.714	ENSACLG00000022360	-	98	38.125
ENSACLG00000005694	-	50	40.187	ENSACLG00000001368	-	91	40.187
ENSACLG00000005694	-	50	43.333	ENSACLG00000019270	-	83	42.188
ENSACLG00000005694	-	50	43.066	ENSACLG00000005795	-	67	43.066
ENSACLG00000005694	-	53	44.595	ENSACLG00000020975	-	97	38.182
ENSACLG00000005694	-	52	39.130	ENSACLG00000022499	-	82	39.130
ENSACLG00000005694	-	50	39.333	ENSACLG00000022497	-	90	39.333
ENSACLG00000005694	-	56	38.800	ENSACLG00000028002	-	93	38.333
ENSACLG00000005694	-	52	40.559	ENSACLG00000020231	-	94	40.559
ENSACLG00000005694	-	66	41.176	ENSACLG00000026538	-	97	41.176
ENSACLG00000005694	-	50	37.989	ENSACLG00000019674	-	89	42.202
ENSACLG00000005694	-	60	41.429	ENSACLG00000017576	-	91	43.558
ENSACLG00000005694	-	50	44.595	ENSACLG00000018700	-	98	44.595
ENSACLG00000005694	-	52	45.977	ENSACLG00000018707	-	96	45.977
ENSACLG00000005694	-	53	39.247	ENSACLG00000001018	-	85	38.750
ENSACLG00000005694	-	53	44.318	ENSACLG00000021343	-	99	44.318
ENSACLG00000005694	-	51	41.250	ENSACLG00000014336	-	91	41.250
ENSACLG00000005694	-	50	43.750	ENSACLG00000017939	-	96	43.750
ENSACLG00000005694	-	62	40.994	ENSACLG00000001003	-	89	40.994
ENSACLG00000005694	-	66	39.357	ENSACLG00000020615	-	67	44.099
ENSACLG00000005694	-	72	44.776	ENSACLG00000020610	-	85	44.776
ENSACLG00000005694	-	53	37.970	ENSACLG00000018701	-	75	40.123
ENSACLG00000005694	-	50	42.857	ENSACLG00000024459	-	87	42.857
ENSACLG00000005694	-	56	39.604	ENSACLG00000016841	-	83	39.604
ENSACLG00000005694	-	50	42.336	ENSACLG00000006718	-	52	42.336
ENSACLG00000005694	-	51	39.516	ENSACLG00000019167	-	88	39.516
ENSACLG00000005694	-	51	41.573	ENSACLG00000021846	-	85	41.573
ENSACLG00000005694	-	51	45.342	ENSACLG00000017801	-	54	45.342
ENSACLG00000005694	-	69	33.585	ENSACLG00000017925	-	83	41.912
ENSACLG00000005694	-	51	41.104	ENSACLG00000022383	-	97	41.104
ENSACLG00000005694	-	50	40.678	ENSACLG00000000537	-	98	38.462
ENSACLG00000005694	-	64	37.226	ENSACLG00000008374	-	65	41.727
ENSACLG00000005694	-	56	34.667	ENSACLG00000018551	snai2	68	34.667
ENSACLG00000005694	-	50	45.455	ENSACLG00000024670	-	81	37.190

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000005694	-	50	35.688	ENSAPOG00000019138	-	60	35.688	Acanthochromis_polyacanthus
ENSACLG00000005694	-	50	38.519	ENSACIG00000004641	-	62	38.519	Amphilophus_citrinellus
ENSACLG00000005694	-	53	34.263	ENSAOCG00000014769	-	65	34.263	Amphiprion_ocellaris
ENSACLG00000005694	-	53	34.263	ENSAOCG00000015944	-	59	34.263	Amphiprion_ocellaris
ENSACLG00000005694	-	99	56.098	ENSAPEG00000010013	-	92	57.616	Amphiprion_percula
ENSACLG00000005694	-	54	39.130	ENSATEG00000018931	-	94	34.921	Anabas_testudineus
ENSACLG00000005694	-	55	44.000	ENSCSEG00000010453	-	65	38.514	Cynoglossus_semilaevis
ENSACLG00000005694	-	52	41.667	ENSCVAG00000006653	-	64	41.667	Cyprinodon_variegatus
ENSACLG00000005694	-	58	43.210	ENSCVAG00000020141	-	88	43.210	Cyprinodon_variegatus
ENSACLG00000005694	-	58	36.316	ENSCVAG00000003250	-	69	36.316	Cyprinodon_variegatus
ENSACLG00000005694	-	50	36.842	ENSEBUG00000007931	-	80	34.615	Eptatretus_burgeri
ENSACLG00000005694	-	52	35.514	ENSEBUG00000002290	-	55	38.095	Eptatretus_burgeri
ENSACLG00000005694	-	54	36.702	ENSELUG00000001909	-	90	31.977	Esox_lucius
ENSACLG00000005694	-	53	44.898	ENSELUG00000024007	-	67	44.898	Esox_lucius
ENSACLG00000005694	-	60	39.252	ENSGAFG00000007528	-	73	39.252	Gambusia_affinis
ENSACLG00000005694	-	51	35.802	ENSGAFG00000008204	-	64	37.989	Gambusia_affinis
ENSACLG00000005694	-	81	99.531	ENSHBUG00000006656	-	100	100.000	Haplochromis_burtoni
ENSACLG00000005694	-	55	36.697	ENSHCOG00000013489	-	95	36.697	Hippocampus_comes
ENSACLG00000005694	-	58	36.134	ENSIPUG00000013083	-	64	36.134	Ictalurus_punctatus
ENSACLG00000005694	-	61	35.185	ENSKMAG00000014184	-	85	33.636	Kryptolebias_marmoratus
ENSACLG00000005694	-	53	35.135	ENSLBEG00000001132	-	85	36.029	Labrus_bergylta
ENSACLG00000005694	-	54	39.375	ENSLBEG00000011210	-	56	39.375	Labrus_bergylta
ENSACLG00000005694	-	56	39.241	ENSLBEG00000006161	-	86	39.241	Labrus_bergylta
ENSACLG00000005694	-	50	34.978	ENSLBEG00000017424	-	97	36.090	Labrus_bergylta
ENSACLG00000005694	-	52	36.923	ENSLOCG00000004208	-	99	39.881	Lepisosteus_oculatus
ENSACLG00000005694	-	54	36.782	ENSMAMG00000017939	-	94	36.782	Mastacembelus_armatus
ENSACLG00000005694	-	53	32.685	ENSONIG00000007967	-	77	32.685	Oreochromis_niloticus
ENSACLG00000005694	-	56	36.283	ENSONIG00000005050	-	65	30.579	Oreochromis_niloticus
ENSACLG00000005694	-	55	34.615	ENSORLG00000002268	-	94	39.474	Oryzias_latipes
ENSACLG00000005694	-	51	40.127	ENSORLG00000021885	-	65	40.426	Oryzias_latipes
ENSACLG00000005694	-	54	40.828	ENSORLG00020018921	-	75	40.828	Oryzias_latipes_hni
ENSACLG00000005694	-	51	42.742	ENSORLG00020019227	-	61	44.681	Oryzias_latipes_hni
ENSACLG00000005694	-	50	34.737	ENSPMGG00000007051	-	70	36.216	Periophthalmus_magnuspinnatus
ENSACLG00000005694	-	62	35.238	ENSPMGG00000006928	-	72	37.778	Periophthalmus_magnuspinnatus
ENSACLG00000005694	-	50	41.216	ENSPMGG00000009571	-	74	41.216	Periophthalmus_magnuspinnatus
ENSACLG00000005694	-	55	33.889	ENSPMGG00000002455	-	95	41.379	Periophthalmus_magnuspinnatus
ENSACLG00000005694	-	51	38.650	ENSPFOG00000018860	-	100	37.895	Poecilia_formosa
ENSACLG00000005694	-	54	36.364	ENSPLAG00000010067	-	71	36.364	Poecilia_latipinna
ENSACLG00000005694	-	55	36.111	ENSPLAG00000008941	-	90	37.895	Poecilia_latipinna
ENSACLG00000005694	-	55	30.000	ENSPLAG00000014832	-	91	30.000	Poecilia_latipinna
ENSACLG00000005694	-	59	40.000	ENSPMEG00000024117	-	61	43.678	Poecilia_mexicana
ENSACLG00000005694	-	53	32.806	ENSPMEG00000002953	-	64	34.906	Poecilia_mexicana
ENSACLG00000005694	-	55	30.769	ENSPMEG00000005210	-	91	30.769	Poecilia_mexicana
ENSACLG00000005694	-	54	41.860	ENSPREG00000002603	-	55	41.860	Poecilia_reticulata
ENSACLG00000005694	-	51	35.417	ENSPNAG00000005946	-	85	35.417	Pygocentrus_nattereri
ENSACLG00000005694	-	54	35.102	ENSSMAG00000008308	-	73	35.102	Scophthalmus_maximus
ENSACLG00000005694	-	58	42.169	ENSSMAG00000004259	-	94	42.169	Scophthalmus_maximus
ENSACLG00000005694	-	61	41.611	ENSSMAG00000013291	-	97	40.940	Scophthalmus_maximus
ENSACLG00000005694	-	53	32.685	ENSSLDG00000011849	-	55	32.685	Seriola_lalandi_dorsalis
ENSACLG00000005694	-	78	55.769	ENSSPAG00000011544	-	89	55.044	Stegastes_partitus
ENSACLG00000005694	-	51	42.373	ENSXCOG00000000254	-	66	42.373	Xiphophorus_couchianus
ENSACLG00000005694	-	53	38.571	ENSXCOG00000020768	-	75	38.571	Xiphophorus_couchianus
ENSACLG00000005694	-	80	40.816	ENSXCOG00000003441	-	79	35.754	Xiphophorus_couchianus
ENSACLG00000005694	-	53	33.898	ENSXMAG00000012936	-	82	33.898	Xiphophorus_maculatus