EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000005707 (Gene tree)
Gene ID: 113010860
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 8183 bases
Position: chr18:9157132-9165314
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000008456	RRM_1	PF00076.22	7.8e-13	1	1
ENSACLP00000008433	RRM_1	PF00076.22	8.1e-13	1	1
ENSACLP00000008415	RRM_1	PF00076.22	8.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000008611	-	1378	-	ENSACLP00000008415	309 (aa)	-	-
ENSACLT00000008629	-	1345	-	ENSACLP00000008433	298 (aa)	-	-
ENSACLT00000008652	-	882	-	ENSACLP00000008456	293 (aa)	-	-

Gene Model

Click here to download ENSACLG00000005707's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000005707's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000005707	-	71	52.558	ENSACLG00000007561	raly	64	53.991
ENSACLG00000005707	-	86	82.213	ENSACLG00000013636	-	87	78.947
ENSACLG00000005707	-	86	82.609	ENSACLG00000000995	-	81	84.545
ENSACLG00000005707	-	94	50.987	ENSACLG00000006949	-	78	54.310
ENSACLG00000005707	-	91	49.823	ENSACLG00000011720	-	80	53.361

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000005707	-	91	49.638	ENSG00000184672	RALYL	92	78.205	Homo_sapiens
ENSACLG00000005707	-	86	86.166	ENSAPOG00000006963	hnrnpc	85	80.075	Acanthochromis_polyacanthus
ENSACLG00000005707	-	97	94.097	ENSACIG00000016568	-	83	96.498	Amphilophus_citrinellus
ENSACLG00000005707	-	86	82.879	ENSACIG00000000270	-	83	84.018	Amphilophus_citrinellus
ENSACLG00000005707	-	86	86.561	ENSAOCG00000003896	-	85	80.451	Amphiprion_ocellaris
ENSACLG00000005707	-	90	93.258	ENSAOCG00000021616	-	83	93.258	Amphiprion_ocellaris
ENSACLG00000005707	-	90	93.258	ENSAPEG00000019962	-	85	92.884	Amphiprion_percula
ENSACLG00000005707	-	86	86.561	ENSAPEG00000001489	-	85	80.451	Amphiprion_percula
ENSACLG00000005707	-	86	83.071	ENSATEG00000011734	-	85	81.250	Anabas_testudineus
ENSACLG00000005707	-	90	92.565	ENSATEG00000018006	-	79	97.209	Anabas_testudineus
ENSACLG00000005707	-	92	46.102	ENSAPLG00000015574	RALYL	82	52.697	Anas_platyrhynchos
ENSACLG00000005707	-	91	48.264	ENSACAG00000028464	RALYL	81	53.112	Anolis_carolinensis
ENSACLG00000005707	-	91	49.638	ENSANAG00000023383	RALYL	80	55.022	Aotus_nancymaae
ENSACLG00000005707	-	89	78.571	ENSAMXG00000034915	zgc:55733	91	75.564	Astyanax_mexicanus
ENSACLG00000005707	-	72	77.619	ENSAMXG00000042946	hnrnpc	97	75.393	Astyanax_mexicanus
ENSACLG00000005707	-	91	49.638	ENSCJAG00000000402	RALYL	80	55.022	Callithrix_jacchus
ENSACLG00000005707	-	93	48.123	ENSCPOG00000012314	RALYL	81	52.917	Cavia_porcellus
ENSACLG00000005707	-	91	49.638	ENSCCAG00000025003	RALYL	76	78.205	Cebus_capucinus
ENSACLG00000005707	-	91	49.638	ENSCATG00000042145	RALYL	80	55.022	Cercocebus_atys
ENSACLG00000005707	-	93	48.123	ENSCLAG00000005228	RALYL	81	52.917	Chinchilla_lanigera
ENSACLG00000005707	-	72	54.667	ENSCHOG00000013228	RALYL	75	52.655	Choloepus_hoffmanni
ENSACLG00000005707	-	91	49.638	ENSCANG00000039144	RALYL	80	55.022	Colobus_angolensis_palliatus
ENSACLG00000005707	-	93	48.299	ENSCGRG00001009241	Ralyl	81	52.282	Cricetulus_griseus_chok1gshd
ENSACLG00000005707	-	84	88.353	ENSCSEG00000021349	-	82	84.791	Cynoglossus_semilaevis
ENSACLG00000005707	-	75	76.233	ENSCSEG00000019769	-	74	73.874	Cynoglossus_semilaevis
ENSACLG00000005707	-	92	65.455	ENSCVAG00000002797	-	86	64.865	Cyprinodon_variegatus
ENSACLG00000005707	-	90	88.390	ENSCVAG00000016981	-	81	87.640	Cyprinodon_variegatus
ENSACLG00000005707	-	89	80.827	ENSDARG00000103845	zgc:55733	93	76.426	Danio_rerio
ENSACLG00000005707	-	83	81.633	ENSDARG00000053810	hnrnpc	82	76.136	Danio_rerio
ENSACLG00000005707	-	91	49.306	ENSDORG00000003721	Ralyl	81	53.112	Dipodomys_ordii
ENSACLG00000005707	-	57	56.250	ENSETEG00000014028	RALYL	82	60.248	Echinops_telfairi
ENSACLG00000005707	-	71	49.767	ENSEBUG00000006049	RALYL	74	47.418	Eptatretus_burgeri
ENSACLG00000005707	-	73	47.111	ENSEBUG00000012363	hnrnpc	67	46.053	Eptatretus_burgeri
ENSACLG00000005707	-	91	48.958	ENSEEUG00000007202	RALYL	82	53.333	Erinaceus_europaeus
ENSACLG00000005707	-	90	80.882	ENSELUG00000004132	-	91	78.676	Esox_lucius
ENSACLG00000005707	-	86	80.074	ENSELUG00000007714	-	93	76.534	Esox_lucius
ENSACLG00000005707	-	90	48.611	ENSFALG00000008647	RALYL	96	57.746	Ficedula_albicollis
ENSACLG00000005707	-	86	85.448	ENSFHEG00000007278	-	82	85.448	Fundulus_heteroclitus
ENSACLG00000005707	-	92	76.923	ENSFHEG00000003605	-	88	74.170	Fundulus_heteroclitus
ENSACLG00000005707	-	76	56.388	ENSGALG00000036938	RALYL	80	52.697	Gallus_gallus
ENSACLG00000005707	-	92	76.923	ENSGAFG00000020486	-	87	73.801	Gambusia_affinis
ENSACLG00000005707	-	88	90.661	ENSGAFG00000020992	-	84	89.883	Gambusia_affinis
ENSACLG00000005707	-	75	74.429	ENSGACG00000018932	-	89	68.000	Gasterosteus_aculeatus
ENSACLG00000005707	-	88	86.873	ENSGACG00000017772	-	97	88.538	Gasterosteus_aculeatus
ENSACLG00000005707	-	91	49.638	ENSGGOG00000000841	RALYL	80	55.022	Gorilla_gorilla
ENSACLG00000005707	-	86	83.004	ENSHBUG00000018342	-	85	79.699	Haplochromis_burtoni
ENSACLG00000005707	-	96	99.329	ENSHBUG00000010527	-	90	99.329	Haplochromis_burtoni
ENSACLG00000005707	-	93	47.440	ENSHGLG00000004866	RALYL	81	52.500	Heterocephalus_glaber_female
ENSACLG00000005707	-	93	47.440	ENSHGLG00100017480	RALYL	81	52.500	Heterocephalus_glaber_male
ENSACLG00000005707	-	88	86.131	ENSHCOG00000012333	hnrnpc	91	85.663	Hippocampus_comes
ENSACLG00000005707	-	88	79.377	ENSIPUG00000011271	hnrnpc	98	80.088	Ictalurus_punctatus
ENSACLG00000005707	-	89	80.451	ENSIPUG00000008666	zgc:55733	94	80.093	Ictalurus_punctatus
ENSACLG00000005707	-	91	48.958	ENSSTOG00000012583	RALYL	82	52.697	Ictidomys_tridecemlineatus
ENSACLG00000005707	-	92	79.336	ENSKMAG00000011170	-	84	79.468	Kryptolebias_marmoratus
ENSACLG00000005707	-	90	89.925	ENSKMAG00000018265	-	83	89.925	Kryptolebias_marmoratus
ENSACLG00000005707	-	89	89.811	ENSLBEG00000006193	-	84	89.888	Labrus_bergylta
ENSACLG00000005707	-	95	72.852	ENSLBEG00000024418	-	87	71.269	Labrus_bergylta
ENSACLG00000005707	-	92	77.860	ENSLBEG00000006979	-	86	76.190	Labrus_bergylta
ENSACLG00000005707	-	89	70.522	ENSLOCG00000002560	hnrnpc	91	71.111	Lepisosteus_oculatus
ENSACLG00000005707	-	91	49.638	ENSMNEG00000033288	RALYL	80	55.022	Macaca_nemestrina
ENSACLG00000005707	-	91	49.638	ENSMLEG00000038284	RALYL	80	55.022	Mandrillus_leucophaeus
ENSACLG00000005707	-	86	84.190	ENSMAMG00000012236	-	84	80.827	Mastacembelus_armatus
ENSACLG00000005707	-	90	92.565	ENSMAMG00000008033	-	89	93.725	Mastacembelus_armatus
ENSACLG00000005707	-	86	82.609	ENSMZEG00005020460	-	88	77.186	Maylandia_zebra
ENSACLG00000005707	-	100	100.000	ENSMZEG00005024249	-	93	100.000	Maylandia_zebra
ENSACLG00000005707	-	93	48.299	ENSMAUG00000015149	Ralyl	81	52.282	Mesocricetus_auratus
ENSACLG00000005707	-	91	49.819	ENSMICG00000005558	RALYL	79	78.205	Microcebus_murinus
ENSACLG00000005707	-	93	48.299	ENSMOCG00000017371	Ralyl	91	49.446	Microtus_ochrogaster
ENSACLG00000005707	-	89	81.887	ENSMMOG00000021465	-	92	80.377	Mola_mola
ENSACLG00000005707	-	85	92.369	ENSMMOG00000019520	-	84	92.237	Mola_mola
ENSACLG00000005707	-	90	87.640	ENSMALG00000014623	-	84	88.015	Monopterus_albus
ENSACLG00000005707	-	86	76.285	ENSMALG00000007520	-	85	72.374	Monopterus_albus
ENSACLG00000005707	-	93	47.959	ENSMUSG00000039717	Ralyl	92	76.923	Mus_musculus
ENSACLG00000005707	-	93	48.639	ENSMPUG00000010724	RALYL	79	52.542	Mustela_putorius_furo
ENSACLG00000005707	-	93	48.299	ENSNGAG00000013375	Ralyl	81	52.282	Nannospalax_galili
ENSACLG00000005707	-	96	98.955	ENSNBRG00000015676	-	90	98.955	Neolamprologus_brichardi
ENSACLG00000005707	-	87	81.923	ENSNBRG00000004912	-	94	79.913	Neolamprologus_brichardi
ENSACLG00000005707	-	91	49.638	ENSNLEG00000002702	RALYL	76	55.022	Nomascus_leucogenys
ENSACLG00000005707	-	62	50.510	ENSOPRG00000013650	-	98	48.691	Ochotona_princeps
ENSACLG00000005707	-	91	48.432	ENSODEG00000001012	RALYL	81	52.917	Octodon_degus
ENSACLG00000005707	-	86	83.794	ENSONIG00000007859	-	93	80.952	Oreochromis_niloticus
ENSACLG00000005707	-	96	98.606	ENSONIG00000018350	-	90	98.606	Oreochromis_niloticus
ENSACLG00000005707	-	90	89.781	ENSORLG00000003144	-	82	89.781	Oryzias_latipes
ENSACLG00000005707	-	86	73.333	ENSORLG00000009999	-	93	68.621	Oryzias_latipes
ENSACLG00000005707	-	86	72.941	ENSORLG00020018228	hnrnpc	93	68.276	Oryzias_latipes_hni
ENSACLG00000005707	-	90	89.781	ENSORLG00015009460	-	82	89.781	Oryzias_latipes_hsok
ENSACLG00000005707	-	86	73.333	ENSORLG00015019755	-	93	68.621	Oryzias_latipes_hsok
ENSACLG00000005707	-	86	74.510	ENSOMEG00000020488	-	85	70.896	Oryzias_melastigma
ENSACLG00000005707	-	90	92.509	ENSOMEG00000022665	-	83	92.509	Oryzias_melastigma
ENSACLG00000005707	-	91	49.638	ENSPPAG00000038705	RALYL	80	55.022	Pan_paniscus
ENSACLG00000005707	-	93	51.408	ENSPPRG00000018612	RALYL	80	54.978	Panthera_pardus
ENSACLG00000005707	-	93	51.056	ENSPTIG00000020331	RALYL	80	54.978	Panthera_tigris_altaica
ENSACLG00000005707	-	91	49.638	ENSPTRG00000020381	RALYL	80	55.022	Pan_troglodytes
ENSACLG00000005707	-	91	49.638	ENSPANG00000029305	RALYL	80	55.022	Papio_anubis
ENSACLG00000005707	-	88	78.067	ENSPKIG00000022837	-	84	82.528	Paramormyrops_kingsleyae
ENSACLG00000005707	-	90	79.197	ENSPKIG00000008592	-	85	78.467	Paramormyrops_kingsleyae
ENSACLG00000005707	-	93	47.973	ENSPSIG00000011135	RALYL	80	52.697	Pelodiscus_sinensis
ENSACLG00000005707	-	70	81.068	ENSPMGG00000017774	-	96	62.281	Periophthalmus_magnuspinnatus
ENSACLG00000005707	-	74	91.284	ENSPMGG00000013144	-	81	87.907	Periophthalmus_magnuspinnatus
ENSACLG00000005707	-	93	48.299	ENSPEMG00000016447	Ralyl	81	52.282	Peromyscus_maniculatus_bairdii
ENSACLG00000005707	-	74	53.017	ENSPMAG00000002407	RALYL	99	51.304	Petromyzon_marinus
ENSACLG00000005707	-	90	89.888	ENSPFOG00000002643	-	84	87.823	Poecilia_formosa
ENSACLG00000005707	-	92	77.206	ENSPFOG00000001583	-	87	75.646	Poecilia_formosa
ENSACLG00000005707	-	90	89.888	ENSPLAG00000000061	-	82	89.139	Poecilia_latipinna
ENSACLG00000005707	-	92	76.103	ENSPLAG00000015305	-	87	74.539	Poecilia_latipinna
ENSACLG00000005707	-	92	78.755	ENSPMEG00000004802	-	86	75.655	Poecilia_mexicana
ENSACLG00000005707	-	90	89.139	ENSPMEG00000016524	-	82	88.390	Poecilia_mexicana
ENSACLG00000005707	-	90	89.139	ENSPREG00000001852	-	89	88.390	Poecilia_reticulata
ENSACLG00000005707	-	86	78.740	ENSPREG00000007928	-	87	74.908	Poecilia_reticulata
ENSACLG00000005707	-	61	72.816	ENSPPYG00000018710	-	66	72.816	Pongo_abelii
ENSACLG00000005707	-	89	48.399	ENSPVAG00000010821	RALYL	80	52.083	Pteropus_vampyrus
ENSACLG00000005707	-	100	99.329	ENSPNYG00000003747	-	100	99.329	Pundamilia_nyererei
ENSACLG00000005707	-	87	82.308	ENSPNYG00000020293	-	87	79.615	Pundamilia_nyererei
ENSACLG00000005707	-	89	74.539	ENSPNAG00000019200	zgc:55733	86	74.539	Pygocentrus_nattereri
ENSACLG00000005707	-	83	80.242	ENSPNAG00000015686	hnrnpc	89	78.652	Pygocentrus_nattereri
ENSACLG00000005707	-	91	49.638	ENSRROG00000023925	RALYL	81	76.250	Rhinopithecus_roxellana
ENSACLG00000005707	-	90	76.190	ENSSFOG00015012015	-	82	86.111	Scleropages_formosus
ENSACLG00000005707	-	87	78.707	ENSSFOG00015012924	-	80	98.734	Scleropages_formosus
ENSACLG00000005707	-	88	90.114	ENSSMAG00000011147	-	82	92.857	Scophthalmus_maximus
ENSACLG00000005707	-	86	79.051	ENSSMAG00000013592	-	84	76.296	Scophthalmus_maximus
ENSACLG00000005707	-	90	88.015	ENSSDUG00000006730	-	84	87.266	Seriola_dumerili
ENSACLG00000005707	-	91	81.852	ENSSDUG00000001723	-	86	80.370	Seriola_dumerili
ENSACLG00000005707	-	90	88.015	ENSSLDG00000007474	-	92	87.266	Seriola_lalandi_dorsalis
ENSACLG00000005707	-	91	82.222	ENSSLDG00000007454	-	87	80.741	Seriola_lalandi_dorsalis
ENSACLG00000005707	-	65	72.816	ENSSARG00000002374	RALYL	82	45.106	Sorex_araneus
ENSACLG00000005707	-	92	82.288	ENSSPAG00000023204	-	85	81.579	Stegastes_partitus
ENSACLG00000005707	-	90	93.633	ENSSPAG00000013996	-	84	93.633	Stegastes_partitus
ENSACLG00000005707	-	90	48.958	ENSTGUG00000011689	RALYL	81	53.814	Taeniopygia_guttata
ENSACLG00000005707	-	89	76.030	ENSTRUG00000020158	-	84	75.194	Takifugu_rubripes
ENSACLG00000005707	-	86	78.175	ENSTNIG00000000334	-	94	76.336	Tetraodon_nigroviridis
ENSACLG00000005707	-	86	77.907	ENSTNIG00000007427	-	84	76.718	Tetraodon_nigroviridis
ENSACLG00000005707	-	74	48.511	ENSTBEG00000005551	RALYL	92	48.101	Tupaia_belangeri
ENSACLG00000005707	-	91	47.703	ENSTTRG00000015762	RALYL	80	51.915	Tursiops_truncatus
ENSACLG00000005707	-	91	47.292	ENSVPAG00000008501	RALYL	81	50.216	Vicugna_pacos
ENSACLG00000005707	-	53	90.184	ENSXCOG00000019434	-	69	88.344	Xiphophorus_couchianus
ENSACLG00000005707	-	95	72.085	ENSXCOG00000006552	-	84	70.455	Xiphophorus_couchianus
ENSACLG00000005707	-	90	89.139	ENSXMAG00000022849	-	86	88.390	Xiphophorus_maculatus
ENSACLG00000005707	-	92	77.289	ENSXMAG00000009333	-	87	74.170	Xiphophorus_maculatus