EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000005733 (Gene tree)
Gene ID: 113031198
Gene Symbol: rab34b
Alias: si:dkey-220h13.7
Full Name: ras-related protein Rab-34-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 7536 bases
Position: chr10:18387880-18395415
Accession: 113031198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000008424	MMR_HSR1	PF01926.23	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000008620	-	855	-	ENSACLP00000008424	265 (aa)	XP_026038951	UPI000E3FE3A3

Gene Model

Click here to download ENSACLG00000005733's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000005733's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000005733	rab34b	61	37.267	ENSACLG00000013668	rab1ba	79	37.267
ENSACLG00000005733	rab34b	77	33.005	ENSACLG00000018066	rab5aa	89	33.005
ENSACLG00000005733	rab34b	61	39.506	ENSACLG00000019423	rab41	75	39.506
ENSACLG00000005733	rab34b	60	35.000	ENSACLG00000007696	rab12	65	35.000
ENSACLG00000005733	rab34b	66	36.364	ENSACLG00000025138	rab6ba	83	36.364
ENSACLG00000005733	rab34b	60	31.250	ENSACLG00000021470	rab22a	81	31.250
ENSACLG00000005733	rab34b	55	41.333	ENSACLG00000010965	-	62	41.333
ENSACLG00000005733	rab34b	77	30.583	ENSACLG00000021109	si:dkey-13a21.4	93	30.583
ENSACLG00000005733	rab34b	77	33.173	ENSACLG00000010268	rab11al	95	32.367
ENSACLG00000005733	rab34b	62	32.143	ENSACLG00000024456	-	79	32.143
ENSACLG00000005733	rab34b	59	38.217	ENSACLG00000027590	-	73	38.217
ENSACLG00000005733	rab34b	63	36.527	ENSACLG00000013505	-	76	36.527
ENSACLG00000005733	rab34b	60	33.125	ENSACLG00000002706	rab5c	71	33.125
ENSACLG00000005733	rab34b	56	37.584	ENSACLG00000002819	rab23	65	40.385
ENSACLG00000005733	rab34b	65	36.782	ENSACLG00000009468	RAB39B	81	36.782
ENSACLG00000005733	rab34b	59	38.217	ENSACLG00000022893	-	73	38.217
ENSACLG00000005733	rab34b	61	38.509	ENSACLG00000026487	rab6bb	76	38.509
ENSACLG00000005733	rab34b	61	37.267	ENSACLG00000007644	rab1ab	78	37.267
ENSACLG00000005733	rab34b	66	33.908	ENSACLG00000005446	-	74	33.908
ENSACLG00000005733	rab34b	63	35.928	ENSACLG00000026336	rab15	77	35.928
ENSACLG00000005733	rab34b	63	35.542	ENSACLG00000018721	si:dkey-16l2.16	95	33.171
ENSACLG00000005733	rab34b	78	31.925	ENSACLG00000018262	rab25a	97	31.925
ENSACLG00000005733	rab34b	61	40.373	ENSACLG00000013734	-	75	40.373
ENSACLG00000005733	rab34b	60	38.125	ENSACLG00000023526	rab30	77	38.125
ENSACLG00000005733	rab34b	59	34.375	ENSACLG00000004795	rab9b	71	34.375
ENSACLG00000005733	rab34b	63	33.533	ENSACLG00000001646	-	78	33.533
ENSACLG00000005733	rab34b	60	32.515	ENSACLG00000024502	-	78	32.515
ENSACLG00000005733	rab34b	76	35.644	ENSACLG00000019643	-	94	35.644
ENSACLG00000005733	rab34b	59	35.256	ENSACLG00000005420	rab11ba	70	35.256
ENSACLG00000005733	rab34b	63	35.928	ENSACLG00000006329	-	76	35.928
ENSACLG00000005733	rab34b	60	32.515	ENSACLG00000018847	RAB7A	78	32.515
ENSACLG00000005733	rab34b	66	33.908	ENSACLG00000007076	rab11bb	74	33.908
ENSACLG00000005733	rab34b	80	32.432	ENSACLG00000000860	-	96	32.432
ENSACLG00000005733	rab34b	58	33.987	ENSACLG00000011484	rab18a	74	33.987
ENSACLG00000005733	rab34b	75	34.146	ENSACLG00000021547	rab33a	71	34.146
ENSACLG00000005733	rab34b	77	31.100	ENSACLG00000010251	rab25b	94	31.100
ENSACLG00000005733	rab34b	69	31.148	ENSACLG00000015289	rab18b	88	31.148
ENSACLG00000005733	rab34b	65	33.526	ENSACLG00000007514	rab42a	79	33.526
ENSACLG00000005733	rab34b	98	67.939	ENSACLG00000005093	rab34a	98	67.939
ENSACLG00000005733	rab34b	77	32.039	ENSACLG00000001775	rab11a	93	32.039
ENSACLG00000005733	rab34b	61	37.888	ENSACLG00000003326	-	78	37.888

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000005733	rab34b	81	93.488	ENSAPOG00000019147	rab34b	95	82.500	Acanthochromis_polyacanthus
ENSACLG00000005733	rab34b	97	83.203	ENSACIG00000004859	rab34b	100	83.203	Amphilophus_citrinellus
ENSACLG00000005733	rab34b	96	85.992	ENSAOCG00000007106	rab34b	94	85.992	Amphiprion_ocellaris
ENSACLG00000005733	rab34b	87	88.696	ENSAPEG00000018607	rab34b	84	88.462	Amphiprion_percula
ENSACLG00000005733	rab34b	90	84.583	ENSATEG00000006851	rab34b	94	84.583	Anabas_testudineus
ENSACLG00000005733	rab34b	97	71.094	ENSAMXG00000006018	rab34b	99	71.094	Astyanax_mexicanus
ENSACLG00000005733	rab34b	89	81.780	ENSCSEG00000018133	rab34b	94	81.780	Cynoglossus_semilaevis
ENSACLG00000005733	rab34b	97	72.266	ENSDARG00000010977	rab34b	99	72.266	Danio_rerio
ENSACLG00000005733	rab34b	96	81.641	ENSELUG00000005597	rab34b	99	81.641	Esox_lucius
ENSACLG00000005733	rab34b	96	86.220	ENSFHEG00000004532	rab34b	100	86.220	Fundulus_heteroclitus
ENSACLG00000005733	rab34b	78	84.058	ENSGMOG00000007140	rab34b	100	84.058	Gadus_morhua
ENSACLG00000005733	rab34b	96	89.453	ENSGACG00000020514	rab34b	99	89.453	Gasterosteus_aculeatus
ENSACLG00000005733	rab34b	97	70.312	ENSIPUG00000024531	rab34	99	70.312	Ictalurus_punctatus
ENSACLG00000005733	rab34b	96	88.189	ENSKMAG00000019341	rab34b	100	88.189	Kryptolebias_marmoratus
ENSACLG00000005733	rab34b	96	86.275	ENSLBEG00000027819	rab34b	100	86.275	Labrus_bergylta
ENSACLG00000005733	rab34b	96	87.059	ENSMAMG00000020214	rab34b	100	87.059	Mastacembelus_armatus
ENSACLG00000005733	rab34b	99	81.298	ENSMMOG00000010936	rab34b	89	81.298	Mola_mola
ENSACLG00000005733	rab34b	89	87.342	ENSMALG00000018499	rab34b	89	87.342	Monopterus_albus
ENSACLG00000005733	rab34b	96	98.819	ENSONIG00000005519	rab34b	100	98.819	Oreochromis_niloticus
ENSACLG00000005733	rab34b	99	84.151	ENSORLG00000003119	rab34b	96	84.151	Oryzias_latipes
ENSACLG00000005733	rab34b	99	84.906	ENSORLG00020016139	rab34b	96	84.906	Oryzias_latipes_hni
ENSACLG00000005733	rab34b	99	84.151	ENSORLG00015000584	rab34b	96	84.151	Oryzias_latipes_hsok
ENSACLG00000005733	rab34b	97	86.434	ENSOMEG00000010334	rab34b	98	85.597	Oryzias_melastigma
ENSACLG00000005733	rab34b	97	70.039	ENSPKIG00000013326	rab34b	99	70.039	Paramormyrops_kingsleyae
ENSACLG00000005733	rab34b	97	83.594	ENSPMGG00000021697	rab34b	100	83.594	Periophthalmus_magnuspinnatus
ENSACLG00000005733	rab34b	96	87.843	ENSPFOG00000011444	rab34b	100	87.843	Poecilia_formosa
ENSACLG00000005733	rab34b	96	87.795	ENSPLAG00000005074	rab34b	100	87.795	Poecilia_latipinna
ENSACLG00000005733	rab34b	96	87.795	ENSPMEG00000013297	rab34b	100	87.795	Poecilia_mexicana
ENSACLG00000005733	rab34b	96	87.008	ENSPREG00000009813	rab34b	100	87.008	Poecilia_reticulata
ENSACLG00000005733	rab34b	100	86.415	ENSPNYG00000017153	rab34b	99	98.870	Pundamilia_nyererei
ENSACLG00000005733	rab34b	89	74.262	ENSPNAG00000015040	rab34b	99	74.262	Pygocentrus_nattereri
ENSACLG00000005733	rab34b	97	72.374	ENSSFOG00015005188	rab34	99	72.374	Scleropages_formosus
ENSACLG00000005733	rab34b	89	88.136	ENSSMAG00000019926	rab34b	100	85.232	Scophthalmus_maximus
ENSACLG00000005733	rab34b	96	91.797	ENSSDUG00000016760	rab34b	80	91.797	Seriola_dumerili
ENSACLG00000005733	rab34b	69	94.022	ENSSLDG00000014812	rab34b	90	94.022	Seriola_lalandi_dorsalis
ENSACLG00000005733	rab34b	96	87.008	ENSSPAG00000002801	rab34b	100	87.008	Stegastes_partitus
ENSACLG00000005733	rab34b	91	84.232	ENSTRUG00000014481	rab34b	98	84.232	Takifugu_rubripes
ENSACLG00000005733	rab34b	96	84.375	ENSTNIG00000016158	rab34b	99	84.375	Tetraodon_nigroviridis