EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000005894 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: si:ch211-153b23.3
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 3559 bases
Position: chr2:26752416-26755974
Accession: ZDB-GENE-141216-408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000008661	Sua5_yciO_yrdC	PF01300.18	2.9e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000008864	-	2631	-	ENSACLP00000008661	877 (aa)	-	-

Gene Model

Click here to download ENSACLG00000005894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000005894's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000005894	si:ch211-153b23.3	59	33.766	ENSACLG00000005471	si:ch211-153b23.4	58	33.766

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000005894	si:ch211-153b23.3	58	31.407	ENSAPOG00000006178	si:ch211-153b23.4	59	31.407	Acanthochromis_polyacanthus
ENSACLG00000005894	si:ch211-153b23.3	58	31.407	ENSAPOG00000006144	si:ch211-153b23.4	60	31.407	Acanthochromis_polyacanthus
ENSACLG00000005894	si:ch211-153b23.3	100	73.182	ENSACIG00000006968	si:ch211-153b23.3	100	72.955	Amphilophus_citrinellus
ENSACLG00000005894	si:ch211-153b23.3	100	81.911	ENSAOCG00000010974	si:ch211-153b23.3	100	81.911	Amphiprion_ocellaris
ENSACLG00000005894	si:ch211-153b23.3	56	31.412	ENSAOCG00000010999	si:ch211-153b23.4	61	31.412	Amphiprion_ocellaris
ENSACLG00000005894	si:ch211-153b23.3	56	31.890	ENSAPEG00000014665	si:ch211-153b23.4	60	31.890	Amphiprion_percula
ENSACLG00000005894	si:ch211-153b23.3	100	82.139	ENSAPEG00000014700	si:ch211-153b23.3	100	82.139	Amphiprion_percula
ENSACLG00000005894	si:ch211-153b23.3	100	80.747	ENSATEG00000004956	si:ch211-153b23.3	99	80.747	Anabas_testudineus
ENSACLG00000005894	si:ch211-153b23.3	57	32.122	ENSATEG00000004948	si:ch211-153b23.4	59	32.122	Anabas_testudineus
ENSACLG00000005894	si:ch211-153b23.3	100	70.501	ENSAMXG00000038564	si:ch211-153b23.3	99	70.501	Astyanax_mexicanus
ENSACLG00000005894	si:ch211-153b23.3	99	77.185	ENSCSEG00000014853	si:ch211-153b23.3	100	77.185	Cynoglossus_semilaevis
ENSACLG00000005894	si:ch211-153b23.3	72	30.061	ENSCSEG00000014838	si:ch211-153b23.4	74	30.061	Cynoglossus_semilaevis
ENSACLG00000005894	si:ch211-153b23.3	57	33.143	ENSCVAG00000021145	si:ch211-153b23.4	64	33.333	Cyprinodon_variegatus
ENSACLG00000005894	si:ch211-153b23.3	100	79.796	ENSCVAG00000021124	si:ch211-153b23.3	100	79.796	Cyprinodon_variegatus
ENSACLG00000005894	si:ch211-153b23.3	100	70.595	ENSDARG00000104919	si:ch211-153b23.3	99	70.707	Danio_rerio
ENSACLG00000005894	si:ch211-153b23.3	80	87.156	ENSELUG00000004912	si:ch211-153b23.3	99	87.156	Esox_lucius
ENSACLG00000005894	si:ch211-153b23.3	57	32.381	ENSFALG00000011343	-	59	32.381	Ficedula_albicollis
ENSACLG00000005894	si:ch211-153b23.3	100	80.726	ENSFHEG00000010030	si:ch211-153b23.3	99	80.726	Fundulus_heteroclitus
ENSACLG00000005894	si:ch211-153b23.3	71	30.455	ENSFHEG00000010001	si:ch211-153b23.4	77	30.612	Fundulus_heteroclitus
ENSACLG00000005894	si:ch211-153b23.3	100	79.909	ENSGAFG00000007455	si:ch211-153b23.3	99	79.909	Gambusia_affinis
ENSACLG00000005894	si:ch211-153b23.3	56	32.821	ENSHBUG00000000013	si:ch211-153b23.4	65	32.821	Haplochromis_burtoni
ENSACLG00000005894	si:ch211-153b23.3	100	99.430	ENSHBUG00000001760	si:ch211-153b23.3	100	99.430	Haplochromis_burtoni
ENSACLG00000005894	si:ch211-153b23.3	100	70.615	ENSIPUG00000015213	si:ch211-153b23.3	99	70.522	Ictalurus_punctatus
ENSACLG00000005894	si:ch211-153b23.3	59	33.208	ENSKMAG00000006919	-	59	33.208	Kryptolebias_marmoratus
ENSACLG00000005894	si:ch211-153b23.3	99	79.318	ENSKMAG00000006792	si:ch211-153b23.3	99	79.318	Kryptolebias_marmoratus
ENSACLG00000005894	si:ch211-153b23.3	58	33.208	ENSKMAG00000006829	si:ch211-153b23.4	63	33.270	Kryptolebias_marmoratus
ENSACLG00000005894	si:ch211-153b23.3	100	80.568	ENSLBEG00000026324	si:ch211-153b23.3	99	80.568	Labrus_bergylta
ENSACLG00000005894	si:ch211-153b23.3	94	57.619	ENSLACG00000005800	-	99	57.619	Latimeria_chalumnae
ENSACLG00000005894	si:ch211-153b23.3	84	62.500	ENSLOCG00000015063	si:ch211-153b23.3	98	62.500	Lepisosteus_oculatus
ENSACLG00000005894	si:ch211-153b23.3	59	32.830	ENSMAMG00000009277	si:ch211-153b23.4	62	32.576	Mastacembelus_armatus
ENSACLG00000005894	si:ch211-153b23.3	59	32.319	ENSMAMG00000009358	si:ch211-153b23.4	63	32.319	Mastacembelus_armatus
ENSACLG00000005894	si:ch211-153b23.3	100	79.728	ENSMAMG00000009328	si:ch211-153b23.3	100	79.728	Mastacembelus_armatus
ENSACLG00000005894	si:ch211-153b23.3	100	99.316	ENSMZEG00005011450	si:ch211-153b23.3	100	99.316	Maylandia_zebra
ENSACLG00000005894	si:ch211-153b23.3	59	33.581	ENSMZEG00005011433	si:ch211-153b23.4	63	33.272	Maylandia_zebra
ENSACLG00000005894	si:ch211-153b23.3	100	80.068	ENSMMOG00000004436	si:ch211-153b23.3	99	80.068	Mola_mola
ENSACLG00000005894	si:ch211-153b23.3	59	33.088	ENSNBRG00000013392	si:ch211-153b23.4	65	33.088	Neolamprologus_brichardi
ENSACLG00000005894	si:ch211-153b23.3	100	98.974	ENSNBRG00000013370	si:ch211-153b23.3	100	98.974	Neolamprologus_brichardi
ENSACLG00000005894	si:ch211-153b23.3	59	33.581	ENSONIG00000017875	si:ch211-153b23.4	59	33.581	Oreochromis_niloticus
ENSACLG00000005894	si:ch211-153b23.3	100	77.427	ENSORLG00000006161	si:ch211-153b23.3	99	77.427	Oryzias_latipes
ENSACLG00000005894	si:ch211-153b23.3	97	78.664	ENSORLG00020000910	si:ch211-153b23.3	100	78.664	Oryzias_latipes_hni
ENSACLG00000005894	si:ch211-153b23.3	97	77.661	ENSORLG00015003698	si:ch211-153b23.3	100	77.661	Oryzias_latipes_hsok
ENSACLG00000005894	si:ch211-153b23.3	59	33.648	ENSORLG00015003709	si:ch211-153b23.4	59	33.647	Oryzias_latipes_hsok
ENSACLG00000005894	si:ch211-153b23.3	100	78.442	ENSOMEG00000007661	si:ch211-153b23.3	99	78.442	Oryzias_melastigma
ENSACLG00000005894	si:ch211-153b23.3	97	71.795	ENSPKIG00000022450	si:ch211-153b23.3	100	71.795	Paramormyrops_kingsleyae
ENSACLG00000005894	si:ch211-153b23.3	99	50.275	ENSPKIG00000021029	-	99	50.386	Paramormyrops_kingsleyae
ENSACLG00000005894	si:ch211-153b23.3	82	77.551	ENSPMGG00000001311	si:ch211-153b23.3	99	77.551	Periophthalmus_magnuspinnatus
ENSACLG00000005894	si:ch211-153b23.3	100	80.090	ENSPFOG00000012289	si:ch211-153b23.3	99	79.842	Poecilia_formosa
ENSACLG00000005894	si:ch211-153b23.3	99	80.795	ENSPLAG00000016320	si:ch211-153b23.3	100	80.795	Poecilia_latipinna
ENSACLG00000005894	si:ch211-153b23.3	58	32.700	ENSPMEG00000007538	si:ch211-153b23.4	63	32.700	Poecilia_mexicana
ENSACLG00000005894	si:ch211-153b23.3	100	81.066	ENSPMEG00000008884	si:ch211-153b23.3	99	80.817	Poecilia_mexicana
ENSACLG00000005894	si:ch211-153b23.3	59	33.581	ENSPNYG00000000250	si:ch211-153b23.4	63	33.272	Pundamilia_nyererei
ENSACLG00000005894	si:ch211-153b23.3	100	99.430	ENSPNYG00000000251	si:ch211-153b23.3	100	99.430	Pundamilia_nyererei
ENSACLG00000005894	si:ch211-153b23.3	100	71.542	ENSPNAG00000019592	si:ch211-153b23.3	99	71.542	Pygocentrus_nattereri
ENSACLG00000005894	si:ch211-153b23.3	68	49.839	ENSSFOG00015009030	-	96	49.839	Scleropages_formosus
ENSACLG00000005894	si:ch211-153b23.3	100	71.910	ENSSFOG00015010910	si:ch211-153b23.3	99	71.910	Scleropages_formosus
ENSACLG00000005894	si:ch211-153b23.3	99	81.549	ENSSMAG00000005446	si:ch211-153b23.3	100	81.549	Scophthalmus_maximus
ENSACLG00000005894	si:ch211-153b23.3	59	32.448	ENSSDUG00000006671	si:ch211-153b23.4	64	32.448	Seriola_dumerili
ENSACLG00000005894	si:ch211-153b23.3	100	80.861	ENSSLDG00000008629	si:ch211-153b23.3	100	80.861	Seriola_lalandi_dorsalis
ENSACLG00000005894	si:ch211-153b23.3	99	75.286	ENSTRUG00000020530	si:ch211-153b23.3	100	75.744	Takifugu_rubripes
ENSACLG00000005894	si:ch211-153b23.3	93	81.203	ENSTNIG00000008962	si:ch211-153b23.3	99	81.203	Tetraodon_nigroviridis
ENSACLG00000005894	si:ch211-153b23.3	59	32.008	ENSXMAG00000021388	si:ch211-153b23.4	62	32.453	Xiphophorus_maculatus
ENSACLG00000005894	si:ch211-153b23.3	100	80.866	ENSXMAG00000029318	si:ch211-153b23.3	99	80.866	Xiphophorus_maculatus