EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000005914 (Gene tree)
Gene ID: 113028329
Gene Symbol: polr3a
Alias: fb81e09|im:7139382|wu:fb81e09
Full Name: RNA polymerase III subunit A
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 24138 bases
Position: chr8:11552140-11576277
Accession: 113028329
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000008819	RNA_pol_Rpb1_5	PF04998.17	2e-88	1	1
ENSACLP00000008868	RNA_pol_Rpb1_5	PF04998.17	2e-88	1	1
ENSACLP00000008882	RNA_pol_Rpb1_5	PF04998.17	2.1e-88	1	1
ENSACLP00000008882	RNA_pol_Rpb1_4	PF05000.17	5.4e-32	1	1
ENSACLP00000008819	RNA_pol_Rpb1_4	PF05000.17	5.9e-32	1	1
ENSACLP00000008868	RNA_pol_Rpb1_4	PF05000.17	6e-32	1	1
ENSACLP00000008882	RNA_pol_Rpb1_2	PF00623.20	1.3e-72	1	1
ENSACLP00000008819	RNA_pol_Rpb1_2	PF00623.20	1.4e-72	1	1
ENSACLP00000008868	RNA_pol_Rpb1_2	PF00623.20	1.4e-72	1	1
ENSACLP00000008882	RNA_pol_Rpb1_3	PF04983.18	4.3e-41	1	1
ENSACLP00000008819	RNA_pol_Rpb1_3	PF04983.18	5e-41	1	1
ENSACLP00000008868	RNA_pol_Rpb1_3	PF04983.18	5.1e-41	1	1
ENSACLP00000008868	RNA_pol_Rpb1_1	PF04997.12	1.2e-91	1	1
ENSACLP00000008819	RNA_pol_Rpb1_1	PF04997.12	1.5e-87	1	1
ENSACLP00000008882	RNA_pol_Rpb1_1	PF04997.12	2.8e-87	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000009023	-	5223	XM_026178514	ENSACLP00000008819	1369 (aa)	XP_026034299	-
ENSACLT00000009073	-	4173	-	ENSACLP00000008868	1390 (aa)	-	UPI000329D75A
ENSACLT00000009087	-	4017	-	ENSACLP00000008882	1339 (aa)	-	-

Gene Model

Click here to download ENSACLG00000005914's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000005914's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000005914	polr3a	91	38.300	ENSACLG00000006735	polr2a	68	38.512
ENSACLG00000005914	polr3a	87	31.655	ENSACLG00000020541	polr1a	81	30.719

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000005914	polr3a	100	89.640	ENSG00000148606	POLR3A	98	91.772	Homo_sapiens
ENSACLG00000005914	polr3a	63	92.857	ENSAPOG00000022727	polr3a	99	93.031	Acanthochromis_polyacanthus
ENSACLG00000005914	polr3a	100	89.375	ENSAMEG00000017801	POLR3A	100	89.375	Ailuropoda_melanoleuca
ENSACLG00000005914	polr3a	96	97.057	ENSACIG00000024504	polr3a	97	98.000	Amphilophus_citrinellus
ENSACLG00000005914	polr3a	100	93.237	ENSAOCG00000003949	-	100	93.237	Amphiprion_ocellaris
ENSACLG00000005914	polr3a	100	96.547	ENSAOCG00000002071	polr3a	100	96.547	Amphiprion_ocellaris
ENSACLG00000005914	polr3a	100	96.547	ENSAPEG00000013351	polr3a	100	96.547	Amphiprion_percula
ENSACLG00000005914	polr3a	100	96.403	ENSAPEG00000001966	-	100	96.403	Amphiprion_percula
ENSACLG00000005914	polr3a	100	96.906	ENSATEG00000023277	polr3a	100	96.906	Anabas_testudineus
ENSACLG00000005914	polr3a	100	90.139	ENSAPLG00000015878	POLR3A	99	90.182	Anas_platyrhynchos
ENSACLG00000005914	polr3a	96	89.130	ENSACAG00000007985	POLR3A	99	88.923	Anolis_carolinensis
ENSACLG00000005914	polr3a	100	87.141	ENSANAG00000028922	POLR3A	96	92.357	Aotus_nancymaae
ENSACLG00000005914	polr3a	100	89.496	ENSAMXG00000018852	polr3a	100	89.496	Astyanax_mexicanus
ENSACLG00000005914	polr3a	100	89.640	ENSBTAG00000013259	POLR3A	100	89.640	Bos_taurus
ENSACLG00000005914	polr3a	99	56.763	WBGene00004411	rpc-1	99	56.908	Caenorhabditis_elegans
ENSACLG00000005914	polr3a	100	89.424	ENSCJAG00000001015	POLR3A	100	89.424	Callithrix_jacchus
ENSACLG00000005914	polr3a	100	89.640	ENSCAFG00000015546	POLR3A	100	89.640	Canis_familiaris
ENSACLG00000005914	polr3a	100	89.640	ENSCAFG00020014711	POLR3A	100	89.640	Canis_lupus_dingo
ENSACLG00000005914	polr3a	100	89.353	ENSCHIG00000000352	POLR3A	100	89.353	Capra_hircus
ENSACLG00000005914	polr3a	100	89.065	ENSTSYG00000006671	POLR3A	100	89.065	Carlito_syrichta
ENSACLG00000005914	polr3a	100	89.262	ENSCAPG00000016031	POLR3A	100	89.309	Cavia_aperea
ENSACLG00000005914	polr3a	100	89.353	ENSCPOG00000022387	POLR3A	100	89.353	Cavia_porcellus
ENSACLG00000005914	polr3a	100	87.986	ENSCCAG00000032995	POLR3A	100	87.986	Cebus_capucinus
ENSACLG00000005914	polr3a	100	89.640	ENSCATG00000035842	POLR3A	98	91.772	Cercocebus_atys
ENSACLG00000005914	polr3a	100	89.568	ENSCLAG00000009629	POLR3A	100	89.568	Chinchilla_lanigera
ENSACLG00000005914	polr3a	100	89.640	ENSCSAG00000009292	POLR3A	100	89.640	Chlorocebus_sabaeus
ENSACLG00000005914	polr3a	84	80.128	ENSCHOG00000008368	POLR3A	95	81.169	Choloepus_hoffmanni
ENSACLG00000005914	polr3a	99	90.209	ENSCPBG00000002079	POLR3A	99	90.209	Chrysemys_picta_bellii
ENSACLG00000005914	polr3a	99	69.042	ENSCSAVG00000009925	-	99	69.042	Ciona_savignyi
ENSACLG00000005914	polr3a	87	85.341	ENSCANG00000041071	POLR3A	98	91.139	Colobus_angolensis_palliatus
ENSACLG00000005914	polr3a	79	89.648	ENSCGRG00001015599	-	92	89.882	Cricetulus_griseus_chok1gshd
ENSACLG00000005914	polr3a	91	87.278	ENSCGRG00000001019	Polr3a	100	88.563	Cricetulus_griseus_crigri
ENSACLG00000005914	polr3a	100	95.683	ENSCSEG00000016653	polr3a	100	95.683	Cynoglossus_semilaevis
ENSACLG00000005914	polr3a	100	95.755	ENSCVAG00000023049	polr3a	100	95.755	Cyprinodon_variegatus
ENSACLG00000005914	polr3a	99	91.931	ENSDARG00000102569	polr3a	99	91.931	Danio_rerio
ENSACLG00000005914	polr3a	100	88.633	ENSDNOG00000010194	POLR3A	100	88.633	Dasypus_novemcinctus
ENSACLG00000005914	polr3a	100	89.496	ENSDORG00000000184	Polr3a	100	89.496	Dipodomys_ordii
ENSACLG00000005914	polr3a	99	56.802	FBgn0030687	CG17209	99	56.802	Drosophila_melanogaster
ENSACLG00000005914	polr3a	88	91.457	ENSETEG00000007477	POLR3A	89	89.069	Echinops_telfairi
ENSACLG00000005914	polr3a	61	75.733	ENSEBUG00000013761	polr3a	98	75.733	Eptatretus_burgeri
ENSACLG00000005914	polr3a	100	89.496	ENSEASG00005023053	POLR3A	100	89.496	Equus_asinus_asinus
ENSACLG00000005914	polr3a	99	88.614	ENSECAG00000019416	POLR3A	100	89.252	Equus_caballus
ENSACLG00000005914	polr3a	99	84.159	ENSEEUG00000001774	POLR3A	100	85.160	Erinaceus_europaeus
ENSACLG00000005914	polr3a	100	91.170	ENSELUG00000014016	polr3a	100	91.170	Esox_lucius
ENSACLG00000005914	polr3a	100	89.712	ENSFCAG00000000843	POLR3A	100	89.712	Felis_catus
ENSACLG00000005914	polr3a	100	89.720	ENSFALG00000006913	POLR3A	100	89.720	Ficedula_albicollis
ENSACLG00000005914	polr3a	100	89.568	ENSFDAG00000007813	POLR3A	100	89.568	Fukomys_damarensis
ENSACLG00000005914	polr3a	95	94.868	ENSFHEG00000011922	polr3a	99	94.868	Fundulus_heteroclitus
ENSACLG00000005914	polr3a	100	87.862	ENSGMOG00000000291	polr3a	99	87.862	Gadus_morhua
ENSACLG00000005914	polr3a	100	90.216	ENSGALG00000004947	POLR3A	100	90.216	Gallus_gallus
ENSACLG00000005914	polr3a	100	95.396	ENSGAFG00000005112	polr3a	100	95.396	Gambusia_affinis
ENSACLG00000005914	polr3a	100	95.324	ENSGACG00000002304	polr3a	100	95.324	Gasterosteus_aculeatus
ENSACLG00000005914	polr3a	99	89.880	ENSGAGG00000010386	POLR3A	99	89.880	Gopherus_agassizii
ENSACLG00000005914	polr3a	100	88.824	ENSGGOG00000027729	POLR3A	100	90.553	Gorilla_gorilla
ENSACLG00000005914	polr3a	100	99.856	ENSHBUG00000018098	polr3a	100	99.856	Haplochromis_burtoni
ENSACLG00000005914	polr3a	100	89.568	ENSHGLG00000017899	POLR3A	100	89.568	Heterocephalus_glaber_female
ENSACLG00000005914	polr3a	100	89.568	ENSHGLG00100008483	POLR3A	100	89.568	Heterocephalus_glaber_male
ENSACLG00000005914	polr3a	100	94.748	ENSHCOG00000001075	polr3a	100	94.748	Hippocampus_comes
ENSACLG00000005914	polr3a	100	89.568	ENSSTOG00000012983	POLR3A	100	89.568	Ictidomys_tridecemlineatus
ENSACLG00000005914	polr3a	100	95.540	ENSKMAG00000015290	polr3a	100	95.540	Kryptolebias_marmoratus
ENSACLG00000005914	polr3a	99	94.096	ENSLBEG00000017214	polr3a	99	94.096	Labrus_bergylta
ENSACLG00000005914	polr3a	99	86.751	ENSLACG00000018557	POLR3A	99	87.807	Latimeria_chalumnae
ENSACLG00000005914	polr3a	100	92.319	ENSLOCG00000004942	polr3a	100	92.319	Lepisosteus_oculatus
ENSACLG00000005914	polr3a	100	88.210	ENSLAFG00000016719	POLR3A	100	88.210	Loxodonta_africana
ENSACLG00000005914	polr3a	100	89.568	ENSMFAG00000032218	POLR3A	100	89.568	Macaca_fascicularis
ENSACLG00000005914	polr3a	100	89.568	ENSMMUG00000005514	POLR3A	98	91.772	Macaca_mulatta
ENSACLG00000005914	polr3a	100	83.526	ENSMNEG00000035163	POLR3A	99	89.235	Macaca_nemestrina
ENSACLG00000005914	polr3a	100	86.043	ENSMLEG00000030014	POLR3A	98	91.772	Mandrillus_leucophaeus
ENSACLG00000005914	polr3a	100	96.494	ENSMAMG00000017497	polr3a	100	96.475	Mastacembelus_armatus
ENSACLG00000005914	polr3a	100	100.000	ENSMZEG00005000576	polr3a	100	100.000	Maylandia_zebra
ENSACLG00000005914	polr3a	100	72.940	ENSMGAG00000005713	-	100	72.940	Meleagris_gallopavo
ENSACLG00000005914	polr3a	100	87.194	ENSMAUG00000016247	Polr3a	100	87.194	Mesocricetus_auratus
ENSACLG00000005914	polr3a	100	89.640	ENSMICG00000005937	POLR3A	100	90.704	Microcebus_murinus
ENSACLG00000005914	polr3a	100	89.424	ENSMOCG00000012185	Polr3a	100	89.424	Microtus_ochrogaster
ENSACLG00000005914	polr3a	100	95.612	ENSMMOG00000013822	polr3a	100	95.612	Mola_mola
ENSACLG00000005914	polr3a	100	89.496	ENSMODG00000001036	POLR3A	100	89.496	Monodelphis_domestica
ENSACLG00000005914	polr3a	100	96.475	ENSMALG00000001249	polr3a	100	96.475	Monopterus_albus
ENSACLG00000005914	polr3a	100	89.353	MGP_CAROLIEiJ_G0019016	Polr3a	100	89.353	Mus_caroli
ENSACLG00000005914	polr3a	100	89.424	ENSMUSG00000025280	Polr3a	100	89.424	Mus_musculus
ENSACLG00000005914	polr3a	100	89.353	MGP_PahariEiJ_G0030029	Polr3a	100	89.353	Mus_pahari
ENSACLG00000005914	polr3a	100	86.763	MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	Mus_spretus
ENSACLG00000005914	polr3a	100	88.944	ENSMPUG00000003790	POLR3A	100	88.944	Mustela_putorius_furo
ENSACLG00000005914	polr3a	100	88.417	ENSMLUG00000011522	POLR3A	100	88.417	Myotis_lucifugus
ENSACLG00000005914	polr3a	100	87.986	ENSNGAG00000015863	Polr3a	100	87.986	Nannospalax_galili
ENSACLG00000005914	polr3a	100	96.978	ENSNBRG00000014262	polr3a	100	96.978	Neolamprologus_brichardi
ENSACLG00000005914	polr3a	87	83.945	ENSNLEG00000010501	POLR3A	92	83.945	Nomascus_leucogenys
ENSACLG00000005914	polr3a	100	76.917	ENSMEUG00000012446	POLR3A	100	77.018	Notamacropus_eugenii
ENSACLG00000005914	polr3a	100	84.748	ENSOPRG00000001880	-	100	84.748	Ochotona_princeps
ENSACLG00000005914	polr3a	100	88.993	ENSODEG00000015146	POLR3A	100	88.993	Octodon_degus
ENSACLG00000005914	polr3a	100	99.424	ENSONIG00000016129	polr3a	100	99.424	Oreochromis_niloticus
ENSACLG00000005914	polr3a	100	88.970	ENSOANG00000007013	POLR3A	100	88.970	Ornithorhynchus_anatinus
ENSACLG00000005914	polr3a	100	89.137	ENSOCUG00000012450	POLR3A	100	89.137	Oryctolagus_cuniculus
ENSACLG00000005914	polr3a	100	95.683	ENSORLG00000008958	polr3a	100	95.683	Oryzias_latipes
ENSACLG00000005914	polr3a	99	95.949	ENSORLG00020007525	polr3a	98	96.125	Oryzias_latipes_hni
ENSACLG00000005914	polr3a	100	95.683	ENSORLG00015006633	polr3a	100	95.683	Oryzias_latipes_hsok
ENSACLG00000005914	polr3a	100	95.036	ENSOMEG00000012865	polr3a	100	95.036	Oryzias_melastigma
ENSACLG00000005914	polr3a	100	89.353	ENSOGAG00000010995	POLR3A	100	89.353	Otolemur_garnettii
ENSACLG00000005914	polr3a	100	89.296	ENSOARG00000009656	POLR3A	100	89.296	Ovis_aries
ENSACLG00000005914	polr3a	100	89.712	ENSPPRG00000002128	POLR3A	100	89.712	Panthera_pardus
ENSACLG00000005914	polr3a	100	89.712	ENSPTIG00000020916	POLR3A	100	89.712	Panthera_tigris_altaica
ENSACLG00000005914	polr3a	100	89.712	ENSPTRG00000002664	POLR3A	98	91.772	Pan_troglodytes
ENSACLG00000005914	polr3a	100	89.568	ENSPANG00000022508	POLR3A	98	91.772	Papio_anubis
ENSACLG00000005914	polr3a	100	92.950	ENSPKIG00000008140	polr3a	100	92.950	Paramormyrops_kingsleyae
ENSACLG00000005914	polr3a	100	90.139	ENSPSIG00000002092	POLR3A	100	90.139	Pelodiscus_sinensis
ENSACLG00000005914	polr3a	100	89.137	ENSPEMG00000006768	Polr3a	100	89.137	Peromyscus_maniculatus_bairdii
ENSACLG00000005914	polr3a	100	89.568	ENSPCIG00000015842	POLR3A	100	89.568	Phascolarctos_cinereus
ENSACLG00000005914	polr3a	54	95.973	ENSPFOG00000006458	polr3a	100	95.973	Poecilia_formosa
ENSACLG00000005914	polr3a	100	95.827	ENSPLAG00000000997	polr3a	100	95.827	Poecilia_latipinna
ENSACLG00000005914	polr3a	100	95.755	ENSPMEG00000006821	polr3a	100	95.755	Poecilia_mexicana
ENSACLG00000005914	polr3a	100	95.540	ENSPREG00000002385	polr3a	100	95.540	Poecilia_reticulata
ENSACLG00000005914	polr3a	94	89.388	ENSPPYG00000002305	POLR3A	99	89.388	Pongo_abelii
ENSACLG00000005914	polr3a	83	87.196	ENSPCAG00000005690	POLR3A	82	87.196	Procavia_capensis
ENSACLG00000005914	polr3a	100	89.496	ENSPCOG00000028311	POLR3A	100	89.496	Propithecus_coquereli
ENSACLG00000005914	polr3a	100	88.201	ENSPVAG00000015553	POLR3A	100	88.201	Pteropus_vampyrus
ENSACLG00000005914	polr3a	100	99.856	ENSPNYG00000020987	polr3a	100	99.856	Pundamilia_nyererei
ENSACLG00000005914	polr3a	99	88.689	ENSPNAG00000006629	polr3a	99	88.689	Pygocentrus_nattereri
ENSACLG00000005914	polr3a	100	89.281	ENSRNOG00000010008	Polr3a	100	89.281	Rattus_norvegicus
ENSACLG00000005914	polr3a	100	86.115	ENSRBIG00000034967	POLR3A	98	91.772	Rhinopithecus_bieti
ENSACLG00000005914	polr3a	100	89.568	ENSRROG00000025527	POLR3A	98	91.772	Rhinopithecus_roxellana
ENSACLG00000005914	polr3a	99	50.393	YOR116C	RPO31	98	50.035	Saccharomyces_cerevisiae
ENSACLG00000005914	polr3a	100	89.568	ENSSBOG00000022199	POLR3A	100	89.568	Saimiri_boliviensis_boliviensis
ENSACLG00000005914	polr3a	100	89.496	ENSSHAG00000007588	POLR3A	94	89.496	Sarcophilus_harrisii
ENSACLG00000005914	polr3a	100	93.453	ENSSFOG00015014357	polr3a	100	93.453	Scleropages_formosus
ENSACLG00000005914	polr3a	100	95.827	ENSSMAG00000001780	polr3a	100	95.827	Scophthalmus_maximus
ENSACLG00000005914	polr3a	100	96.691	ENSSDUG00000019840	polr3a	100	96.691	Seriola_dumerili
ENSACLG00000005914	polr3a	100	96.691	ENSSLDG00000023908	polr3a	100	96.691	Seriola_lalandi_dorsalis
ENSACLG00000005914	polr3a	70	88.715	ENSSARG00000009916	POLR3A	89	88.715	Sorex_araneus
ENSACLG00000005914	polr3a	100	87.770	ENSSPUG00000013209	POLR3A	100	87.770	Sphenodon_punctatus
ENSACLG00000005914	polr3a	100	96.691	ENSSPAG00000017712	polr3a	100	96.691	Stegastes_partitus
ENSACLG00000005914	polr3a	93	97.826	ENSSSCG00000010327	POLR3A	95	97.826	Sus_scrofa
ENSACLG00000005914	polr3a	100	89.856	ENSTGUG00000006423	-	100	89.856	Taeniopygia_guttata
ENSACLG00000005914	polr3a	100	95.544	ENSTRUG00000013488	polr3a	100	95.468	Takifugu_rubripes
ENSACLG00000005914	polr3a	100	95.259	ENSTNIG00000013151	polr3a	100	95.259	Tetraodon_nigroviridis
ENSACLG00000005914	polr3a	72	90.426	ENSTBEG00000015288	POLR3A	75	90.426	Tupaia_belangeri
ENSACLG00000005914	polr3a	100	82.158	ENSTTRG00000007817	POLR3A	100	82.158	Tursiops_truncatus
ENSACLG00000005914	polr3a	100	87.194	ENSUAMG00000011283	POLR3A	100	87.194	Ursus_americanus
ENSACLG00000005914	polr3a	100	89.568	ENSUMAG00000013913	POLR3A	100	89.568	Ursus_maritimus
ENSACLG00000005914	polr3a	100	81.519	ENSVPAG00000003285	POLR3A	100	81.600	Vicugna_pacos
ENSACLG00000005914	polr3a	100	89.640	ENSVVUG00000025523	POLR3A	100	89.640	Vulpes_vulpes
ENSACLG00000005914	polr3a	89	89.151	ENSXETG00000018101	polr3a	100	90.058	Xenopus_tropicalis
ENSACLG00000005914	polr3a	100	95.683	ENSXMAG00000015213	polr3a	100	95.683	Xiphophorus_maculatus