EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000006254 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 4161 bases
Position: chr3:766402-770562
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000009161	RVT_1	PF00078.27	7.3e-25	1	1
ENSACLP00000009161	RNase_H	PF00075.24	5.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000009375	-	4161	-	ENSACLP00000009161	1386 (aa)	-	-

Gene Model

Click here to download ENSACLG00000006254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000006254's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000006254	-	73	32.322	ENSACLG00000014318	-	76	32.322
ENSACLG00000006254	-	89	99.108	ENSACLG00000023027	-	100	99.108
ENSACLG00000006254	-	96	56.538	ENSACLG00000003782	-	98	56.538

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000006254	-	63	38.281	ENSAPEG00000000438	-	98	38.281	Amphiprion_percula
ENSACLG00000006254	-	85	49.706	ENSAMXG00000033455	-	99	49.706	Astyanax_mexicanus
ENSACLG00000006254	-	84	33.110	ENSAMXG00000040526	-	98	32.775	Astyanax_mexicanus
ENSACLG00000006254	-	62	37.868	ENSAMXG00000038483	-	66	37.868	Astyanax_mexicanus
ENSACLG00000006254	-	66	35.560	ENSBTAG00000052165	-	91	35.560	Bos_taurus
ENSACLG00000006254	-	66	34.093	ENSCPBG00000009184	-	98	34.093	Chrysemys_picta_bellii
ENSACLG00000006254	-	88	58.044	ENSCSEG00000011566	-	99	58.044	Cynoglossus_semilaevis
ENSACLG00000006254	-	88	58.044	ENSCSEG00000009059	-	99	58.044	Cynoglossus_semilaevis
ENSACLG00000006254	-	88	32.624	ENSCSEG00000019226	-	70	32.624	Cynoglossus_semilaevis
ENSACLG00000006254	-	88	58.044	ENSCSEG00000012922	-	99	58.044	Cynoglossus_semilaevis
ENSACLG00000006254	-	88	58.044	ENSCSEG00000018136	-	99	58.044	Cynoglossus_semilaevis
ENSACLG00000006254	-	88	58.044	ENSCSEG00000013867	-	99	58.044	Cynoglossus_semilaevis
ENSACLG00000006254	-	73	33.491	ENSECAG00000034459	-	92	33.491	Equus_caballus
ENSACLG00000006254	-	63	33.964	ENSGALG00000050905	-	94	33.333	Gallus_gallus
ENSACLG00000006254	-	63	32.633	ENSGALG00000053504	-	94	32.080	Gallus_gallus
ENSACLG00000006254	-	95	34.136	ENSLBEG00000013565	-	99	34.405	Labrus_bergylta
ENSACLG00000006254	-	86	59.401	ENSMAMG00000010978	-	98	59.401	Mastacembelus_armatus
ENSACLG00000006254	-	50	30.866	ENSMODG00000029516	-	99	30.307	Monodelphis_domestica
ENSACLG00000006254	-	59	37.209	ENSMODG00000028504	-	91	37.209	Monodelphis_domestica
ENSACLG00000006254	-	59	30.430	ENSMODG00000027851	-	97	30.132	Monodelphis_domestica
ENSACLG00000006254	-	56	31.931	ENSMODG00000029316	-	96	31.436	Monodelphis_domestica
ENSACLG00000006254	-	50	30.587	ENSMODG00000028191	-	99	30.028	Monodelphis_domestica
ENSACLG00000006254	-	58	43.103	ENSMODG00000027448	-	99	43.103	Monodelphis_domestica
ENSACLG00000006254	-	80	43.103	ENSMODG00000028385	-	99	43.103	Monodelphis_domestica
ENSACLG00000006254	-	50	30.587	ENSMODG00000029806	-	99	30.028	Monodelphis_domestica
ENSACLG00000006254	-	75	33.117	ENSMODG00000027661	-	91	32.653	Monodelphis_domestica
ENSACLG00000006254	-	53	32.629	ENSMODG00000027664	-	98	32.100	Monodelphis_domestica
ENSACLG00000006254	-	80	43.103	ENSMODG00000028573	-	99	43.103	Monodelphis_domestica
ENSACLG00000006254	-	76	31.622	ENSMODG00000029722	-	97	31.444	Monodelphis_domestica
ENSACLG00000006254	-	50	30.575	ENSMODG00000027329	-	99	30.307	Monodelphis_domestica
ENSACLG00000006254	-	51	32.548	ENSMODG00000028692	-	98	31.994	Monodelphis_domestica
ENSACLG00000006254	-	83	42.268	ENSMODG00000027428	-	94	42.268	Monodelphis_domestica
ENSACLG00000006254	-	76	31.187	ENSMODG00000029740	-	96	31.095	Monodelphis_domestica
ENSACLG00000006254	-	80	43.103	ENSMODG00000029698	-	99	43.103	Monodelphis_domestica
ENSACLG00000006254	-	52	43.103	ENSMODG00000028686	-	98	43.103	Monodelphis_domestica
ENSACLG00000006254	-	80	43.103	ENSMODG00000027641	-	99	43.103	Monodelphis_domestica
ENSACLG00000006254	-	51	35.188	ENSONIG00000021274	-	98	34.492	Oreochromis_niloticus
ENSACLG00000006254	-	85	65.872	ENSONIG00000021180	-	98	65.872	Oreochromis_niloticus
ENSACLG00000006254	-	73	49.951	ENSORLG00020007796	-	67	49.951	Oryzias_latipes_hni
ENSACLG00000006254	-	62	33.484	ENSOMEG00000005516	-	99	33.075	Oryzias_melastigma
ENSACLG00000006254	-	95	31.625	ENSOMEG00000021132	-	98	31.675	Oryzias_melastigma
ENSACLG00000006254	-	55	32.061	ENSOARG00000014856	-	83	32.061	Ovis_aries
ENSACLG00000006254	-	55	32.061	ENSOARG00000009849	-	82	32.061	Ovis_aries
ENSACLG00000006254	-	73	35.294	ENSPSIG00000001866	-	91	35.294	Pelodiscus_sinensis
ENSACLG00000006254	-	74	33.742	ENSSSCG00000034853	-	89	33.742	Sus_scrofa
ENSACLG00000006254	-	95	37.213	ENSXMAG00000022532	-	95	37.213	Xiphophorus_maculatus
ENSACLG00000006254	-	64	56.306	ENSXMAG00000024544	-	94	56.306	Xiphophorus_maculatus