EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000006549 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 1242 bases
Position: chr16:352610-353851
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000009582	RVT_1	PF00078.27	3.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000009804	-	1242	-	ENSACLP00000009582	363 (aa)	-	-

Gene Model

Click here to download ENSACLG00000006549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000006549's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000006549	-	90	85.276	ENSACLG00000021935	-	100	85.276
ENSACLG00000006549	-	56	33.498	ENSACLG00000021701	-	50	33.498
ENSACLG00000006549	-	81	34.069	ENSACLG00000006798	-	100	34.700
ENSACLG00000006549	-	78	38.112	ENSACLG00000010403	-	92	38.112
ENSACLG00000006549	-	69	33.730	ENSACLG00000013847	-	57	33.730
ENSACLG00000006549	-	82	31.879	ENSACLG00000009861	-	62	31.818
ENSACLG00000006549	-	82	35.235	ENSACLG00000020385	-	51	35.235
ENSACLG00000006549	-	62	32.743	ENSACLG00000013289	-	66	32.743
ENSACLG00000006549	-	83	31.457	ENSACLG00000018563	-	54	31.457
ENSACLG00000006549	-	81	35.811	ENSACLG00000001380	-	50	35.811

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000006549	-	69	33.730	ENSAPOG00000008925	-	70	33.730	Acanthochromis_polyacanthus
ENSACLG00000006549	-	82	36.242	ENSAPEG00000005752	-	70	36.242	Amphiprion_percula
ENSACLG00000006549	-	82	34.448	ENSAMXG00000039106	-	58	34.448	Astyanax_mexicanus
ENSACLG00000006549	-	85	35.897	ENSAMXG00000038502	-	62	35.897	Astyanax_mexicanus
ENSACLG00000006549	-	69	34.000	ENSAMXG00000031032	-	66	34.000	Astyanax_mexicanus
ENSACLG00000006549	-	83	35.505	ENSAMXG00000029182	-	77	35.505	Astyanax_mexicanus
ENSACLG00000006549	-	82	36.877	ENSAMXG00000043469	-	65	36.877	Astyanax_mexicanus
ENSACLG00000006549	-	82	33.557	ENSCPBG00000001369	-	53	33.557	Chrysemys_picta_bellii
ENSACLG00000006549	-	82	34.783	ENSCPBG00000001119	-	65	34.783	Chrysemys_picta_bellii
ENSACLG00000006549	-	75	33.700	ENSCPBG00000001687	-	90	33.700	Chrysemys_picta_bellii
ENSACLG00000006549	-	78	37.153	ENSCVAG00000001415	-	75	37.153	Cyprinodon_variegatus
ENSACLG00000006549	-	63	36.255	ENSGAFG00000008149	-	88	36.255	Gambusia_affinis
ENSACLG00000006549	-	75	33.700	ENSGAGG00000022131	-	90	33.700	Gopherus_agassizii
ENSACLG00000006549	-	82	35.906	ENSGAGG00000013650	-	53	35.906	Gopherus_agassizii
ENSACLG00000006549	-	68	31.325	ENSGAGG00000022000	-	88	31.325	Gopherus_agassizii
ENSACLG00000006549	-	69	35.317	ENSHBUG00000009088	-	68	35.317	Haplochromis_burtoni
ENSACLG00000006549	-	100	83.471	ENSHBUG00000016445	-	68	83.471	Haplochromis_burtoni
ENSACLG00000006549	-	82	35.099	ENSIPUG00000003645	-	61	35.099	Ictalurus_punctatus
ENSACLG00000006549	-	88	32.000	ENSKMAG00000010799	-	97	32.000	Kryptolebias_marmoratus
ENSACLG00000006549	-	81	35.473	ENSKMAG00000007574	-	58	35.473	Kryptolebias_marmoratus
ENSACLG00000006549	-	82	34.228	ENSLBEG00000003912	-	76	34.228	Labrus_bergylta
ENSACLG00000006549	-	61	33.778	ENSLACG00000010227	-	91	33.778	Latimeria_chalumnae
ENSACLG00000006549	-	55	33.831	ENSLACG00000000714	-	98	35.417	Latimeria_chalumnae
ENSACLG00000006549	-	65	30.252	ENSLACG00000004732	-	64	30.252	Latimeria_chalumnae
ENSACLG00000006549	-	65	34.034	ENSLACG00000002249	-	88	33.891	Latimeria_chalumnae
ENSACLG00000006549	-	52	36.898	ENSLACG00000010373	-	77	36.898	Latimeria_chalumnae
ENSACLG00000006549	-	82	31.561	ENSLACG00000001892	-	86	31.561	Latimeria_chalumnae
ENSACLG00000006549	-	62	32.743	ENSLOCG00000017292	-	69	32.018	Lepisosteus_oculatus
ENSACLG00000006549	-	77	36.042	ENSMAMG00000004646	-	60	36.042	Mastacembelus_armatus
ENSACLG00000006549	-	82	31.544	ENSMZEG00005023829	-	62	31.494	Maylandia_zebra
ENSACLG00000006549	-	69	40.400	ENSMALG00000005075	-	78	40.400	Monopterus_albus
ENSACLG00000006549	-	75	35.531	ENSMALG00000020245	-	99	35.531	Monopterus_albus
ENSACLG00000006549	-	71	39.615	ENSNBRG00000002791	-	84	39.615	Neolamprologus_brichardi
ENSACLG00000006549	-	81	34.237	ENSNBRG00000002477	-	87	34.237	Neolamprologus_brichardi
ENSACLG00000006549	-	71	42.692	ENSONIG00000018991	-	90	42.692	Oreochromis_niloticus
ENSACLG00000006549	-	52	34.043	ENSORLG00000026658	-	76	34.043	Oryzias_latipes
ENSACLG00000006549	-	82	34.228	ENSORLG00000027231	-	56	34.228	Oryzias_latipes
ENSACLG00000006549	-	80	33.219	ENSORLG00000027869	-	63	33.219	Oryzias_latipes
ENSACLG00000006549	-	84	39.542	ENSORLG00000022411	-	84	39.542	Oryzias_latipes
ENSACLG00000006549	-	75	38.462	ENSORLG00000022742	-	77	38.462	Oryzias_latipes
ENSACLG00000006549	-	82	35.235	ENSORLG00020009127	-	57	34.564	Oryzias_latipes_hni
ENSACLG00000006549	-	82	38.462	ENSORLG00020016924	-	70	38.462	Oryzias_latipes_hni
ENSACLG00000006549	-	75	37.762	ENSORLG00020004454	-	72	37.762	Oryzias_latipes_hni
ENSACLG00000006549	-	71	42.308	ENSORLG00020021288	-	79	42.308	Oryzias_latipes_hni
ENSACLG00000006549	-	66	37.238	ENSORLG00020000154	-	58	37.238	Oryzias_latipes_hni
ENSACLG00000006549	-	58	36.364	ENSORLG00020016252	-	55	36.364	Oryzias_latipes_hni
ENSACLG00000006549	-	77	38.028	ENSORLG00020002705	-	88	38.028	Oryzias_latipes_hni
ENSACLG00000006549	-	81	36.486	ENSORLG00020012706	-	74	36.486	Oryzias_latipes_hni
ENSACLG00000006549	-	66	32.780	ENSORLG00015009803	-	50	32.780	Oryzias_latipes_hsok
ENSACLG00000006549	-	69	35.200	ENSORLG00015021822	-	66	35.458	Oryzias_latipes_hsok
ENSACLG00000006549	-	82	36.455	ENSORLG00015008138	-	56	36.455	Oryzias_latipes_hsok
ENSACLG00000006549	-	77	36.491	ENSOMEG00000007764	-	95	35.915	Oryzias_melastigma
ENSACLG00000006549	-	82	34.106	ENSPKIG00000005406	-	50	34.106	Paramormyrops_kingsleyae
ENSACLG00000006549	-	62	37.333	ENSPKIG00000019619	-	79	37.333	Paramormyrops_kingsleyae
ENSACLG00000006549	-	90	34.146	ENSPKIG00000007140	-	73	34.146	Paramormyrops_kingsleyae
ENSACLG00000006549	-	86	32.836	ENSPKIG00000004057	-	75	32.836	Paramormyrops_kingsleyae
ENSACLG00000006549	-	86	32.153	ENSPKIG00000003982	-	66	30.973	Paramormyrops_kingsleyae
ENSACLG00000006549	-	66	37.083	ENSPSIG00000001800	-	54	37.083	Pelodiscus_sinensis
ENSACLG00000006549	-	82	37.255	ENSPSIG00000000226	-	58	37.134	Pelodiscus_sinensis
ENSACLG00000006549	-	51	36.364	ENSPSIG00000001531	-	82	37.179	Pelodiscus_sinensis
ENSACLG00000006549	-	80	33.333	ENSPSIG00000001249	-	84	33.333	Pelodiscus_sinensis
ENSACLG00000006549	-	82	38.926	ENSPSIG00000000193	-	59	38.926	Pelodiscus_sinensis
ENSACLG00000006549	-	66	34.855	ENSPSIG00000000367	-	55	34.855	Pelodiscus_sinensis
ENSACLG00000006549	-	81	33.670	ENSPSIG00000001757	-	72	33.670	Pelodiscus_sinensis
ENSACLG00000006549	-	82	36.455	ENSPSIG00000001205	-	64	36.455	Pelodiscus_sinensis
ENSACLG00000006549	-	82	37.374	ENSPSIG00000001197	-	73	37.374	Pelodiscus_sinensis
ENSACLG00000006549	-	78	38.811	ENSPSIG00000002033	-	87	38.811	Pelodiscus_sinensis
ENSACLG00000006549	-	70	36.220	ENSPSIG00000001816	-	95	36.220	Pelodiscus_sinensis
ENSACLG00000006549	-	72	38.403	ENSPSIG00000014032	-	77	38.403	Pelodiscus_sinensis
ENSACLG00000006549	-	69	35.714	ENSPMEG00000018862	-	51	35.714	Poecilia_mexicana
ENSACLG00000006549	-	84	32.407	ENSPMEG00000019465	-	72	32.407	Poecilia_mexicana
ENSACLG00000006549	-	90	37.910	ENSPREG00000006650	-	59	37.910	Poecilia_reticulata
ENSACLG00000006549	-	85	38.065	ENSPREG00000005117	-	66	38.065	Poecilia_reticulata
ENSACLG00000006549	-	55	34.500	ENSPNYG00000004598	-	65	34.500	Pundamilia_nyererei
ENSACLG00000006549	-	50	39.891	ENSPNAG00000001979	-	71	39.891	Pygocentrus_nattereri
ENSACLG00000006549	-	71	35.019	ENSPNAG00000015949	-	66	35.019	Pygocentrus_nattereri
ENSACLG00000006549	-	82	35.099	ENSPNAG00000009058	-	60	35.099	Pygocentrus_nattereri
ENSACLG00000006549	-	82	35.216	ENSPNAG00000010299	-	59	35.216	Pygocentrus_nattereri
ENSACLG00000006549	-	82	33.333	ENSSFOG00015024061	-	54	33.333	Scleropages_formosus
ENSACLG00000006549	-	78	34.965	ENSSFOG00015016168	-	65	34.965	Scleropages_formosus
ENSACLG00000006549	-	93	35.072	ENSSFOG00015015399	-	97	35.072	Scleropages_formosus
ENSACLG00000006549	-	100	66.942	ENSTRUG00000021236	-	56	66.942	Takifugu_rubripes
ENSACLG00000006549	-	70	69.412	ENSTRUG00000024970	-	84	69.412	Takifugu_rubripes
ENSACLG00000006549	-	82	33.893	ENSXMAG00000025957	-	52	33.893	Xiphophorus_maculatus
ENSACLG00000006549	-	75	34.354	ENSXMAG00000027711	-	87	34.354	Xiphophorus_maculatus
ENSACLG00000006549	-	86	38.413	ENSXMAG00000023507	-	61	38.413	Xiphophorus_maculatus