EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000006573 (Gene tree)
Gene ID: 113035274
Gene Symbol: polr1c
Alias: zgc:65973
Full Name: RNA polymerase I and III subunit C
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 10341 bases
Position: chr13:32008638-32018978
Accession: 113035274
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000009637	RNA_pol_A_bac	PF01000.26	4.9e-31	1	1
ENSACLP00000009665	RNA_pol_A_bac	PF01000.26	5.1e-27	1	1
ENSACLP00000009665	RNA_pol_L	PF01193.24	1.5e-22	1	1
ENSACLP00000009637	RNA_pol_L	PF01193.24	2.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000009889	-	894	-	ENSACLP00000009665	297 (aa)	-	-
ENSACLT00000009860	-	1936	-	ENSACLP00000009637	351 (aa)	XP_026046523	UPI0006C96A4B

Gene Model

Click here to download ENSACLG00000006573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000006573's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000006573	polr1c	57	30.392	ENSACLG00000004854	polr2c	80	30.392

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000006573	polr1c	100	73.064	ENSG00000171453	POLR1C	100	75.806	Homo_sapiens
ENSACLG00000006573	polr1c	100	89.744	ENSAPOG00000024356	polr1c	100	89.744	Acanthochromis_polyacanthus
ENSACLG00000006573	polr1c	99	72.779	ENSAMEG00000012205	POLR1C	99	72.206	Ailuropoda_melanoleuca
ENSACLG00000006573	polr1c	94	81.571	ENSACIG00000016268	polr1c	91	81.571	Amphilophus_citrinellus
ENSACLG00000006573	polr1c	100	89.174	ENSAOCG00000011687	polr1c	97	89.174	Amphiprion_ocellaris
ENSACLG00000006573	polr1c	100	90.028	ENSAPEG00000002433	polr1c	100	90.028	Amphiprion_percula
ENSACLG00000006573	polr1c	99	91.954	ENSATEG00000005985	polr1c	99	91.954	Anabas_testudineus
ENSACLG00000006573	polr1c	87	72.697	ENSAPLG00000002908	POLR1C	100	72.039	Anas_platyrhynchos
ENSACLG00000006573	polr1c	88	72.816	ENSACAG00000009764	POLR1C	86	73.203	Anolis_carolinensis
ENSACLG00000006573	polr1c	100	73.401	ENSANAG00000025805	POLR1C	100	73.401	Aotus_nancymaae
ENSACLG00000006573	polr1c	100	83.502	ENSAMXG00000012062	polr1c	100	83.502	Astyanax_mexicanus
ENSACLG00000006573	polr1c	99	73.352	ENSBTAG00000018969	POLR1C	99	73.066	Bos_taurus
ENSACLG00000006573	polr1c	92	46.291	WBGene00019275	rpac-40	92	45.858	Caenorhabditis_elegans
ENSACLG00000006573	polr1c	99	72.542	ENSCJAG00000005594	POLR1C	99	72.542	Callithrix_jacchus
ENSACLG00000006573	polr1c	99	72.206	ENSCAFG00000001872	POLR1C	99	71.633	Canis_familiaris
ENSACLG00000006573	polr1c	59	30.220	ENSCAFG00020007660	POLR2C	50	30.220	Canis_lupus_dingo
ENSACLG00000006573	polr1c	99	72.206	ENSCAFG00020012018	POLR1C	99	71.633	Canis_lupus_dingo
ENSACLG00000006573	polr1c	99	73.352	ENSCHIG00000004352	POLR1C	99	72.779	Capra_hircus
ENSACLG00000006573	polr1c	99	73.220	ENSTSYG00000011921	POLR1C	99	73.220	Carlito_syrichta
ENSACLG00000006573	polr1c	86	73.597	ENSCAPG00000015364	POLR1C	88	72.937	Cavia_aperea
ENSACLG00000006573	polr1c	100	73.504	ENSCPOG00000038098	POLR1C	100	72.934	Cavia_porcellus
ENSACLG00000006573	polr1c	99	72.881	ENSCCAG00000020169	POLR1C	99	72.881	Cebus_capucinus
ENSACLG00000006573	polr1c	100	73.064	ENSCATG00000044045	POLR1C	100	73.064	Cercocebus_atys
ENSACLG00000006573	polr1c	98	74.128	ENSCLAG00000009266	POLR1C	98	73.547	Chinchilla_lanigera
ENSACLG00000006573	polr1c	100	71.795	ENSCSAG00000011913	POLR1C	100	71.510	Chlorocebus_sabaeus
ENSACLG00000006573	polr1c	60	68.868	ENSCHOG00000006601	POLR1C	100	68.868	Choloepus_hoffmanni
ENSACLG00000006573	polr1c	100	76.068	ENSCPBG00000025203	POLR1C	100	75.499	Chrysemys_picta_bellii
ENSACLG00000006573	polr1c	98	53.913	ENSCING00000003563	-	99	53.448	Ciona_intestinalis
ENSACLG00000006573	polr1c	100	73.401	ENSCANG00000043167	POLR1C	100	73.401	Colobus_angolensis_palliatus
ENSACLG00000006573	polr1c	99	71.920	ENSCGRG00001017533	Polr1c	99	71.347	Cricetulus_griseus_chok1gshd
ENSACLG00000006573	polr1c	86	72.607	ENSCGRG00000013225	Polr1c	100	71.947	Cricetulus_griseus_crigri
ENSACLG00000006573	polr1c	100	86.325	ENSCSEG00000018097	polr1c	100	85.470	Cynoglossus_semilaevis
ENSACLG00000006573	polr1c	60	91.509	ENSCVAG00000005684	polr1c	85	91.509	Cyprinodon_variegatus
ENSACLG00000006573	polr1c	100	81.481	ENSDARG00000039400	polr1c	96	80.627	Danio_rerio
ENSACLG00000006573	polr1c	98	73.547	ENSDNOG00000042693	POLR1C	98	72.965	Dasypus_novemcinctus
ENSACLG00000006573	polr1c	99	73.066	ENSDORG00000000429	Polr1c	99	72.493	Dipodomys_ordii
ENSACLG00000006573	polr1c	90	52.050	FBgn0031657	CG3756	93	51.420	Drosophila_melanogaster
ENSACLG00000006573	polr1c	98	68.895	ENSETEG00000010807	POLR1C	98	68.605	Echinops_telfairi
ENSACLG00000006573	polr1c	97	68.529	ENSEBUG00000013725	polr1c	98	67.442	Eptatretus_burgeri
ENSACLG00000006573	polr1c	99	72.206	ENSEASG00005003338	POLR1C	99	71.633	Equus_asinus_asinus
ENSACLG00000006573	polr1c	99	73.220	ENSECAG00000023516	POLR1C	99	73.220	Equus_caballus
ENSACLG00000006573	polr1c	99	73.926	ENSEEUG00000005471	POLR1C	99	73.352	Erinaceus_europaeus
ENSACLG00000006573	polr1c	100	84.175	ENSELUG00000013027	polr1c	100	84.175	Esox_lucius
ENSACLG00000006573	polr1c	99	73.898	ENSFCAG00000009735	POLR1C	99	73.898	Felis_catus
ENSACLG00000006573	polr1c	93	72.783	ENSFALG00000012111	POLR1C	100	72.171	Ficedula_albicollis
ENSACLG00000006573	polr1c	99	72.779	ENSFDAG00000008428	POLR1C	99	72.206	Fukomys_damarensis
ENSACLG00000006573	polr1c	100	89.226	ENSFHEG00000000262	polr1c	100	89.226	Fundulus_heteroclitus
ENSACLG00000006573	polr1c	57	85.465	ENSFHEG00000013867	-	84	88.372	Fundulus_heteroclitus
ENSACLG00000006573	polr1c	93	83.232	ENSGMOG00000013878	polr1c	100	82.317	Gadus_morhua
ENSACLG00000006573	polr1c	100	73.219	ENSGALG00000010349	POLR1C	100	72.650	Gallus_gallus
ENSACLG00000006573	polr1c	100	89.459	ENSGAFG00000010153	polr1c	100	89.459	Gambusia_affinis
ENSACLG00000006573	polr1c	100	86.040	ENSGACG00000002453	polr1c	100	86.040	Gasterosteus_aculeatus
ENSACLG00000006573	polr1c	100	75.214	ENSGAGG00000010640	POLR1C	100	74.644	Gopherus_agassizii
ENSACLG00000006573	polr1c	100	73.064	ENSGGOG00000010903	POLR1C	100	73.064	Gorilla_gorilla
ENSACLG00000006573	polr1c	57	30.392	ENSHBUG00000023040	polr2c	80	30.392	Haplochromis_burtoni
ENSACLG00000006573	polr1c	100	89.459	ENSHBUG00000017816	polr1c	100	88.604	Haplochromis_burtoni
ENSACLG00000006573	polr1c	99	72.493	ENSHGLG00000019441	POLR1C	99	71.920	Heterocephalus_glaber_female
ENSACLG00000006573	polr1c	99	72.779	ENSHGLG00100005970	POLR1C	99	72.206	Heterocephalus_glaber_male
ENSACLG00000006573	polr1c	98	84.058	ENSHCOG00000002179	polr1c	99	84.058	Hippocampus_comes
ENSACLG00000006573	polr1c	99	82.997	ENSIPUG00000024464	polr1c	99	82.421	Ictalurus_punctatus
ENSACLG00000006573	polr1c	99	73.066	ENSSTOG00000010631	POLR1C	99	72.493	Ictidomys_tridecemlineatus
ENSACLG00000006573	polr1c	99	72.493	ENSJJAG00000023110	Polr1c	99	71.920	Jaculus_jaculus
ENSACLG00000006573	polr1c	100	88.319	ENSKMAG00000014305	polr1c	100	87.542	Kryptolebias_marmoratus
ENSACLG00000006573	polr1c	100	90.598	ENSLBEG00000014925	polr1c	100	90.598	Labrus_bergylta
ENSACLG00000006573	polr1c	95	59.403	ENSLACG00000012567	POLR1C	98	58.806	Latimeria_chalumnae
ENSACLG00000006573	polr1c	100	79.487	ENSLOCG00000016710	polr1c	96	78.917	Lepisosteus_oculatus
ENSACLG00000006573	polr1c	87	73.770	ENSLAFG00000026248	POLR1C	100	73.115	Loxodonta_africana
ENSACLG00000006573	polr1c	59	30.220	ENSLAFG00000027230	POLR2C	62	30.220	Loxodonta_africana
ENSACLG00000006573	polr1c	100	72.727	ENSMFAG00000046295	POLR1C	100	72.727	Macaca_fascicularis
ENSACLG00000006573	polr1c	100	72.727	ENSMMUG00000015192	POLR1C	100	72.727	Macaca_mulatta
ENSACLG00000006573	polr1c	100	72.727	ENSMNEG00000028073	POLR1C	100	72.727	Macaca_nemestrina
ENSACLG00000006573	polr1c	100	72.727	ENSMLEG00000034818	POLR1C	100	72.727	Mandrillus_leucophaeus
ENSACLG00000006573	polr1c	100	90.909	ENSMAMG00000008700	polr1c	100	90.909	Mastacembelus_armatus
ENSACLG00000006573	polr1c	100	99.715	ENSMZEG00005018545	polr1c	100	99.715	Maylandia_zebra
ENSACLG00000006573	polr1c	84	69.492	ENSMGAG00000011020	POLR1C	100	68.814	Meleagris_gallopavo
ENSACLG00000006573	polr1c	99	71.920	ENSMAUG00000014329	Polr1c	99	71.347	Mesocricetus_auratus
ENSACLG00000006573	polr1c	99	72.203	ENSMICG00000005027	POLR1C	99	72.203	Microcebus_murinus
ENSACLG00000006573	polr1c	99	72.493	ENSMOCG00000017549	Polr1c	99	71.920	Microtus_ochrogaster
ENSACLG00000006573	polr1c	100	84.848	ENSMMOG00000005380	polr1c	100	84.848	Mola_mola
ENSACLG00000006573	polr1c	84	74.237	ENSMODG00000018964	POLR1C	100	73.898	Monodelphis_domestica
ENSACLG00000006573	polr1c	100	91.246	ENSMALG00000011711	polr1c	100	91.246	Monopterus_albus
ENSACLG00000006573	polr1c	99	63.610	MGP_CAROLIEiJ_G0021662	Polr1c	100	70.455	Mus_caroli
ENSACLG00000006573	polr1c	99	72.493	ENSMUSG00000067148	Polr1c	98	74.257	Mus_musculus
ENSACLG00000006573	polr1c	99	72.779	MGP_PahariEiJ_G0020654	Polr1c	98	75.248	Mus_pahari
ENSACLG00000006573	polr1c	99	72.493	MGP_SPRETEiJ_G0022574	Polr1c	98	74.257	Mus_spretus
ENSACLG00000006573	polr1c	99	72.206	ENSMPUG00000012916	POLR1C	91	71.633	Mustela_putorius_furo
ENSACLG00000006573	polr1c	99	72.493	ENSMLUG00000017751	POLR1C	99	71.920	Myotis_lucifugus
ENSACLG00000006573	polr1c	99	73.066	ENSNGAG00000023487	Polr1c	100	72.881	Nannospalax_galili
ENSACLG00000006573	polr1c	100	98.575	ENSNBRG00000018742	polr1c	100	98.575	Neolamprologus_brichardi
ENSACLG00000006573	polr1c	100	72.365	ENSNLEG00000004035	POLR1C	100	71.795	Nomascus_leucogenys
ENSACLG00000006573	polr1c	98	63.824	ENSMEUG00000006778	POLR1C	98	63.824	Notamacropus_eugenii
ENSACLG00000006573	polr1c	80	69.620	ENSOPRG00000000145	POLR1C	99	71.218	Ochotona_princeps
ENSACLG00000006573	polr1c	62	68.950	ENSODEG00000017109	-	97	69.340	Octodon_degus
ENSACLG00000006573	polr1c	100	73.219	ENSODEG00000015831	-	100	72.650	Octodon_degus
ENSACLG00000006573	polr1c	100	98.575	ENSONIG00000013133	polr1c	98	98.575	Oreochromis_niloticus
ENSACLG00000006573	polr1c	99	70.774	ENSOANG00000003043	POLR1C	99	70.201	Ornithorhynchus_anatinus
ENSACLG00000006573	polr1c	99	71.633	ENSOCUG00000005504	POLR1C	99	71.060	Oryctolagus_cuniculus
ENSACLG00000006573	polr1c	100	83.761	ENSORLG00000019743	polr1c	100	83.761	Oryzias_latipes
ENSACLG00000006573	polr1c	76	68.889	ENSORLG00020005555	polr1c	81	68.889	Oryzias_latipes_hni
ENSACLG00000006573	polr1c	100	84.615	ENSORLG00020006489	POLR1C	100	84.615	Oryzias_latipes_hni
ENSACLG00000006573	polr1c	100	84.046	ENSORLG00015013322	polr1c	100	84.046	Oryzias_latipes_hsok
ENSACLG00000006573	polr1c	100	84.900	ENSOMEG00000016527	polr1c	100	84.900	Oryzias_melastigma
ENSACLG00000006573	polr1c	99	73.066	ENSOGAG00000016318	POLR1C	99	72.206	Otolemur_garnettii
ENSACLG00000006573	polr1c	99	73.066	ENSOARG00000007503	POLR1C	99	72.779	Ovis_aries
ENSACLG00000006573	polr1c	100	73.064	ENSPPAG00000043678	POLR1C	100	73.064	Pan_paniscus
ENSACLG00000006573	polr1c	99	73.898	ENSPPRG00000009760	POLR1C	99	73.898	Panthera_pardus
ENSACLG00000006573	polr1c	99	73.898	ENSPTIG00000014813	POLR1C	99	73.898	Panthera_tigris_altaica
ENSACLG00000006573	polr1c	100	73.064	ENSPTRG00000018202	POLR1C	100	73.064	Pan_troglodytes
ENSACLG00000006573	polr1c	100	73.064	ENSPANG00000009025	POLR1C	100	73.064	Papio_anubis
ENSACLG00000006573	polr1c	100	82.155	ENSPKIG00000009858	polr1c	100	82.155	Paramormyrops_kingsleyae
ENSACLG00000006573	polr1c	100	75.499	ENSPSIG00000012580	POLR1C	94	74.929	Pelodiscus_sinensis
ENSACLG00000006573	polr1c	100	87.542	ENSPMGG00000012121	polr1c	100	87.542	Periophthalmus_magnuspinnatus
ENSACLG00000006573	polr1c	99	71.633	ENSPEMG00000006970	Polr1c	99	71.060	Peromyscus_maniculatus_bairdii
ENSACLG00000006573	polr1c	59	32.967	ENSPMAG00000004827	polr2c	88	31.797	Petromyzon_marinus
ENSACLG00000006573	polr1c	99	71.143	ENSPMAG00000005560	polr1c	99	70.857	Petromyzon_marinus
ENSACLG00000006573	polr1c	98	75.517	ENSPCIG00000028137	POLR1C	98	75.517	Phascolarctos_cinereus
ENSACLG00000006573	polr1c	100	90.028	ENSPFOG00000014357	polr1c	98	90.028	Poecilia_formosa
ENSACLG00000006573	polr1c	100	90.028	ENSPFOG00000014342	POLR1C	100	90.028	Poecilia_formosa
ENSACLG00000006573	polr1c	60	90.566	ENSPLAG00000004111	polr1c	88	90.566	Poecilia_latipinna
ENSACLG00000006573	polr1c	100	90.028	ENSPMEG00000011877	-	100	90.028	Poecilia_mexicana
ENSACLG00000006573	polr1c	100	90.028	ENSPMEG00000008420	polr1c	100	90.028	Poecilia_mexicana
ENSACLG00000006573	polr1c	100	88.604	ENSPREG00000007985	polr1c	100	88.319	Poecilia_reticulata
ENSACLG00000006573	polr1c	100	72.080	ENSPPYG00000016645	POLR1C	100	71.510	Pongo_abelii
ENSACLG00000006573	polr1c	99	72.203	ENSPCOG00000024628	POLR1C	99	72.203	Propithecus_coquereli
ENSACLG00000006573	polr1c	98	67.442	ENSPVAG00000005689	POLR1C	99	67.143	Pteropus_vampyrus
ENSACLG00000006573	polr1c	100	99.715	ENSPNYG00000003620	polr1c	100	99.715	Pundamilia_nyererei
ENSACLG00000006573	polr1c	100	84.330	ENSPNAG00000008443	polr1c	100	83.761	Pygocentrus_nattereri
ENSACLG00000006573	polr1c	99	72.206	ENSRNOG00000019079	Polr1c	99	71.633	Rattus_norvegicus
ENSACLG00000006573	polr1c	100	73.401	ENSRBIG00000007155	POLR1C	100	73.401	Rhinopithecus_bieti
ENSACLG00000006573	polr1c	100	73.401	ENSRROG00000000257	POLR1C	100	73.401	Rhinopithecus_roxellana
ENSACLG00000006573	polr1c	92	48.758	YPR110C	RPC40	95	49.068	Saccharomyces_cerevisiae
ENSACLG00000006573	polr1c	99	72.881	ENSSBOG00000025735	POLR1C	99	72.881	Saimiri_boliviensis_boliviensis
ENSACLG00000006573	polr1c	98	66.860	ENSSHAG00000014456	POLR1C	98	66.570	Sarcophilus_harrisii
ENSACLG00000006573	polr1c	100	83.191	ENSSFOG00015019860	polr1c	100	82.621	Scleropages_formosus
ENSACLG00000006573	polr1c	100	89.744	ENSSMAG00000018865	polr1c	100	88.604	Scophthalmus_maximus
ENSACLG00000006573	polr1c	100	92.308	ENSSDUG00000015745	polr1c	100	91.919	Seriola_dumerili
ENSACLG00000006573	polr1c	100	92.308	ENSSLDG00000018285	polr1c	100	91.919	Seriola_lalandi_dorsalis
ENSACLG00000006573	polr1c	98	72.464	ENSSPUG00000011822	POLR1C	99	71.884	Sphenodon_punctatus
ENSACLG00000006573	polr1c	100	90.028	ENSSPAG00000022369	polr1c	100	90.028	Stegastes_partitus
ENSACLG00000006573	polr1c	99	72.493	ENSSSCG00000028007	POLR1C	98	71.920	Sus_scrofa
ENSACLG00000006573	polr1c	96	73.512	ENSTGUG00000009159	POLR1C	99	72.917	Taeniopygia_guttata
ENSACLG00000006573	polr1c	100	85.185	ENSTRUG00000006264	polr1c	100	85.185	Takifugu_rubripes
ENSACLG00000006573	polr1c	51	70.787	ENSTBEG00000002254	POLR1C	100	70.787	Tupaia_belangeri
ENSACLG00000006573	polr1c	76	70.037	ENSTTRG00000006344	POLR1C	76	69.288	Tursiops_truncatus
ENSACLG00000006573	polr1c	99	72.779	ENSUAMG00000025602	POLR1C	99	72.206	Ursus_americanus
ENSACLG00000006573	polr1c	99	72.779	ENSUMAG00000005938	POLR1C	99	72.206	Ursus_maritimus
ENSACLG00000006573	polr1c	99	73.220	ENSVVUG00000028922	POLR1C	99	73.220	Vulpes_vulpes
ENSACLG00000006573	polr1c	98	68.588	ENSXETG00000010882	polr1c	99	67.341	Xenopus_tropicalis
ENSACLG00000006573	polr1c	100	88.604	ENSXCOG00000014185	polr1c	100	87.749	Xiphophorus_couchianus
ENSACLG00000006573	polr1c	100	89.459	ENSXMAG00000015076	polr1c	100	89.459	Xiphophorus_maculatus