EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACLG00000006640 (Gene tree)
Gene ID
113036417
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A1
Gene Type
protein_coding
Species
Astatotilapia_calliptera
Status
putative
Strand
Plus strand
Length
29209 bases
Position
chr14:11700500-11729708
Accession
ZDB-GENE-030912-3
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACLP00000009741tRNA_anti-codonPF01336.252.1e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACLT00000009966-1674-ENSACLP00000009741557 (aa)--
Gene Model
Click here to download ENSACLG00000006640's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000006640's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACLG00000006640rpa19962.667ENSACLG00000005223RPA19462.667
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACLG00000006640rpa19370.588ENSAPOG00000019409RPA17570.588Acanthochromis_polyacanthus
ENSACLG00000006640rpa19987.770ENSAPOG00000011658rpa19987.770Acanthochromis_polyacanthus
ENSACLG00000006640rpa19964.348ENSAMEG00000007706RPA19364.348Ailuropoda_melanoleuca
ENSACLG00000006640rpa19981.383ENSACIG00000007277rpa19781.383Amphilophus_citrinellus
ENSACLG00000006640rpa19963.652ENSACIG00000012881RPA19863.652Amphilophus_citrinellus
ENSACLG00000006640rpa19989.029ENSAOCG00000023376rpa19989.029Amphiprion_ocellaris
ENSACLG00000006640rpa19960.164ENSAOCG00000009003RPA19459.672Amphiprion_ocellaris
ENSACLG00000006640rpa19372.311ENSAPEG00000019132RPA16672.311Amphiprion_percula
ENSACLG00000006640rpa19989.029ENSAPEG00000008634rpa19989.029Amphiprion_percula
ENSACLG00000006640rpa19989.587ENSATEG00000022024rpa19989.587Anabas_testudineus
ENSACLG00000006640rpa19961.111ENSATEG00000006443RPA19461.111Anabas_testudineus
ENSACLG00000006640rpa19955.401ENSAPLG00000012442RPA19654.938Anas_platyrhynchos
ENSACLG00000006640rpa19958.377ENSACAG00000014490RPA19258.907Anolis_carolinensis
ENSACLG00000006640rpa19964.991ENSANAG00000023456RPA19564.991Aotus_nancymaae
ENSACLG00000006640rpa19979.242ENSAMXG00000008418rpa19779.242Astyanax_mexicanus
ENSACLG00000006640rpa19963.652ENSBTAG00000009711RPA19363.652Bos_taurus
ENSACLG00000006640rpa17733.410WBGene00017546rpa-16533.410Caenorhabditis_elegans
ENSACLG00000006640rpa19962.435ENSCJAG00000001848RPA19362.783Callithrix_jacchus
ENSACLG00000006640rpa19963.058ENSCAFG00000019249RPA19363.230Canis_familiaris
ENSACLG00000006640rpa19963.058ENSCAFG00020009847RPA19363.230Canis_lupus_dingo
ENSACLG00000006640rpa19964.174ENSCHIG00000026308RPA19364.174Capra_hircus
ENSACLG00000006640rpa19963.826ENSTSYG00000003482-9363.826Carlito_syrichta
ENSACLG00000006640rpa19963.826ENSCPOG00000000035RPA19363.826Cavia_porcellus
ENSACLG00000006640rpa19952.422ENSCCAG00000010981RPA19352.422Cebus_capucinus
ENSACLG00000006640rpa19963.304ENSCLAG00000005185-9363.304Chinchilla_lanigera
ENSACLG00000006640rpa19959.408ENSCLAG00000015045-9359.408Chinchilla_lanigera
ENSACLG00000006640rpa19953.460ENSCSAG00000013833RPA19353.979Chlorocebus_sabaeus
ENSACLG00000006640rpa19962.892ENSCHOG00000013540-9862.892Choloepus_hoffmanni
ENSACLG00000006640rpa17871.560ENSCHOG00000009454-9971.560Choloepus_hoffmanni
ENSACLG00000006640rpa19964.983ENSCPBG00000020377RPA19964.965Chrysemys_picta_bellii
ENSACLG00000006640rpa19944.444ENSCING00000023482-9344.444Ciona_intestinalis
ENSACLG00000006640rpa19966.068ENSCANG00000030911RPA19566.068Colobus_angolensis_palliatus
ENSACLG00000006640rpa19963.605ENSCGRG00001008197Rpa19363.605Cricetulus_griseus_chok1gshd
ENSACLG00000006640rpa18169.978ENSCGRG00000000582Rpa18969.978Cricetulus_griseus_crigri
ENSACLG00000006640rpa19957.338ENSCSEG00000012726RPA19957.338Cynoglossus_semilaevis
ENSACLG00000006640rpa19981.115ENSCSEG00000013066rpa19581.115Cynoglossus_semilaevis
ENSACLG00000006640rpa19985.405ENSCVAG00000019431rpa19985.405Cyprinodon_variegatus
ENSACLG00000006640rpa18971.981ENSCVAG00000013446-7471.981Cyprinodon_variegatus
ENSACLG00000006640rpa19976.021ENSDARG00000003938rpa19476.021Danio_rerio
ENSACLG00000006640rpa19964.808ENSDNOG00000017218RPA19364.808Dasypus_novemcinctus
ENSACLG00000006640rpa19964.634ENSDORG00000006199Rpa19563.993Dipodomys_ordii
ENSACLG00000006640rpa19941.975FBgn0010173RpA-709342.681Drosophila_melanogaster
ENSACLG00000006640rpa18174.227ENSETEG00000017608RPA17674.227Echinops_telfairi
ENSACLG00000006640rpa19965.827ENSEASG00005009372RPA19966.007Equus_asinus_asinus
ENSACLG00000006640rpa19964.111ENSECAG00000023886RPA19364.111Equus_caballus
ENSACLG00000006640rpa17571.122ENSEEUG00000002186-6871.122Erinaceus_europaeus
ENSACLG00000006640rpa19464.972ENSELUG00000006136RPA19964.972Esox_lucius
ENSACLG00000006640rpa19980.389ENSELUG00000021071rpa19380.389Esox_lucius
ENSACLG00000006640rpa19964.348ENSFCAG00000006306RPA19364.348Felis_catus
ENSACLG00000006640rpa19963.763ENSFALG00000006575RPA19363.763Ficedula_albicollis
ENSACLG00000006640rpa19964.460ENSFDAG00000007720RPA19364.460Fukomys_damarensis
ENSACLG00000006640rpa19983.774ENSFHEG00000003580rpa19483.774Fundulus_heteroclitus
ENSACLG00000006640rpa19979.024ENSGMOG00000010382rpa19379.024Gadus_morhua
ENSACLG00000006640rpa19962.762ENSGALG00000003072RPA19363.287Gallus_gallus
ENSACLG00000006640rpa19960.065ENSGAFG00000020953RPA19460.714Gambusia_affinis
ENSACLG00000006640rpa19984.144ENSGAFG00000012916rpa19584.144Gambusia_affinis
ENSACLG00000006640rpa19983.511ENSGACG00000010856rpa19483.511Gasterosteus_aculeatus
ENSACLG00000006640rpa19964.747ENSGAGG00000013611RPA19364.747Gopherus_agassizii
ENSACLG00000006640rpa19965.827ENSGGOG00000014186RPA19365.827Gorilla_gorilla
ENSACLG00000006640rpa110099.820ENSHBUG00000017773rpa19499.820Haplochromis_burtoni
ENSACLG00000006640rpa19959.752ENSHBUG00000009348RPA19659.752Haplochromis_burtoni
ENSACLG00000006640rpa19963.589ENSHGLG00000008846RPA19363.589Heterocephalus_glaber_female
ENSACLG00000006640rpa19963.589ENSHGLG00100017755-9363.589Heterocephalus_glaber_male
ENSACLG00000006640rpa19954.181ENSHGLG00100002005-9354.355Heterocephalus_glaber_male
ENSACLG00000006640rpa19959.408ENSHGLG00100000799-9359.408Heterocephalus_glaber_male
ENSACLG00000006640rpa19973.391ENSHCOG00000001401rpa19473.391Hippocampus_comes
ENSACLG00000006640rpa19946.786ENSHCOG00000000351RPA19346.619Hippocampus_comes
ENSACLG00000006640rpa19977.289ENSIPUG00000004400rpa19477.289Ictalurus_punctatus
ENSACLG00000006640rpa19762.257ENSSTOG00000022475RPA19562.257Ictidomys_tridecemlineatus
ENSACLG00000006640rpa19963.826ENSJJAG00000000876Rpa19663.826Jaculus_jaculus
ENSACLG00000006640rpa19981.643ENSKMAG00000005605rpa19481.818Kryptolebias_marmoratus
ENSACLG00000006640rpa19962.610ENSKMAG00000000234RPA19362.610Kryptolebias_marmoratus
ENSACLG00000006640rpa19372.018ENSLBEG00000002281RPA17572.018Labrus_bergylta
ENSACLG00000006640rpa19984.022ENSLBEG00000021604rpa19484.022Labrus_bergylta
ENSACLG00000006640rpa18363.871ENSLACG00000007210RPA19463.871Latimeria_chalumnae
ENSACLG00000006640rpa19973.427ENSLOCG00000006397rpa19473.601Lepisosteus_oculatus
ENSACLG00000006640rpa19963.465ENSLAFG00000015354RPA19363.465Loxodonta_africana
ENSACLG00000006640rpa18261.426ENSMFAG00000036138-9462.055Macaca_fascicularis
ENSACLG00000006640rpa19964.174ENSMMUG00000011604-9564.696Macaca_mulatta
ENSACLG00000006640rpa19959.754ENSMMUG00000002442-9359.754Macaca_mulatta
ENSACLG00000006640rpa18166.376ENSMNEG00000029837-8466.376Macaca_nemestrina
ENSACLG00000006640rpa19963.478ENSMNEG00000031632-9664.000Macaca_nemestrina
ENSACLG00000006640rpa19960.727ENSMLEG00000038768-9561.073Mandrillus_leucophaeus
ENSACLG00000006640rpa19988.288ENSMAMG00000017993rpa19988.288Mastacembelus_armatus
ENSACLG00000006640rpa19372.326ENSMAMG00000020097RPA17871.789Mastacembelus_armatus
ENSACLG00000006640rpa110095.398ENSMZEG00005007551rpa19495.398Maylandia_zebra
ENSACLG00000006640rpa19962.667ENSMZEG00005024731RPA19462.667Maylandia_zebra
ENSACLG00000006640rpa19962.762ENSMGAG00000005315RPA19362.762Meleagris_gallopavo
ENSACLG00000006640rpa19963.986ENSMAUG00000010474Rpa19563.986Mesocricetus_auratus
ENSACLG00000006640rpa19964.161ENSMICG00000012867RPA19364.161Microcebus_murinus
ENSACLG00000006640rpa19963.240ENSMOCG00000013019Rpa19363.240Microtus_ochrogaster
ENSACLG00000006640rpa19984.164ENSMMOG00000014292rpa19784.164Mola_mola
ENSACLG00000006640rpa19965.179ENSMMOG00000010868RPA19365.179Mola_mola
ENSACLG00000006640rpa19963.194ENSMODG00000010549RPA19363.194Monodelphis_domestica
ENSACLG00000006640rpa19672.540ENSMALG00000001208RPA17572.540Monopterus_albus
ENSACLG00000006640rpa19987.701ENSMALG00000011453rpa19487.701Monopterus_albus
ENSACLG00000006640rpa19963.304MGP_CAROLIEiJ_G0016734Rpa19363.304Mus_caroli
ENSACLG00000006640rpa19962.995ENSMUSG00000000751Rpa19363.167Mus_musculus
ENSACLG00000006640rpa19963.495MGP_PahariEiJ_G0017871Rpa19363.495Mus_pahari
ENSACLG00000006640rpa19962.887MGP_SPRETEiJ_G0017577Rpa19363.058Mus_spretus
ENSACLG00000006640rpa19964.634ENSMPUG00000013119RPA19364.634Mustela_putorius_furo
ENSACLG00000006640rpa19963.258ENSMLUG00000006113RPA19363.258Myotis_lucifugus
ENSACLG00000006640rpa19964.000ENSNGAG00000004522Rpa19264.000Nannospalax_galili
ENSACLG00000006640rpa110099.641ENSNBRG00000020595rpa19999.641Neolamprologus_brichardi
ENSACLG00000006640rpa19962.811ENSNBRG00000009672RPA19262.811Neolamprologus_brichardi
ENSACLG00000006640rpa19963.589ENSNLEG00000017149RPA19363.589Nomascus_leucogenys
ENSACLG00000006640rpa19954.878ENSMEUG00000006714RPA19554.878Notamacropus_eugenii
ENSACLG00000006640rpa19962.329ENSODEG00000009038RPA19462.329Octodon_degus
ENSACLG00000006640rpa110092.548ENSONIG00000013135rpa19492.548Oreochromis_niloticus
ENSACLG00000006640rpa19964.645ENSOANG00000010880RPA19564.645Ornithorhynchus_anatinus
ENSACLG00000006640rpa19961.157ENSOCUG00000001504RPA19461.157Oryctolagus_cuniculus
ENSACLG00000006640rpa19957.724ENSORLG00000003368RPA19457.724Oryzias_latipes
ENSACLG00000006640rpa19984.848ENSORLG00000004856rpa19484.848Oryzias_latipes
ENSACLG00000006640rpa19985.027ENSORLG00020008980rpa19485.027Oryzias_latipes_hni
ENSACLG00000006640rpa19468.000ENSORLG00020015284RPA17968.000Oryzias_latipes_hni
ENSACLG00000006640rpa17666.901ENSORLG00015005867-9766.901Oryzias_latipes_hsok
ENSACLG00000006640rpa19959.272ENSORLG00015020383RPA19459.272Oryzias_latipes_hsok
ENSACLG00000006640rpa19985.027ENSORLG00015013982rpa19485.027Oryzias_latipes_hsok
ENSACLG00000006640rpa19961.319ENSOMEG00000011040RPA19861.319Oryzias_melastigma
ENSACLG00000006640rpa19980.392ENSOMEG00000004704rpa19480.392Oryzias_melastigma
ENSACLG00000006640rpa19963.589ENSOGAG00000005581-9363.589Otolemur_garnettii
ENSACLG00000006640rpa17375.824ENSOGAG00000029379-9075.824Otolemur_garnettii
ENSACLG00000006640rpa19964.174ENSOARG00000014479RPA19364.174Ovis_aries
ENSACLG00000006640rpa19963.589ENSPPAG00000039680RPA19363.937Pan_paniscus
ENSACLG00000006640rpa19964.174ENSPPRG00000011807RPA19364.174Panthera_pardus
ENSACLG00000006640rpa19964.174ENSPTIG00000007898RPA19364.174Panthera_tigris_altaica
ENSACLG00000006640rpa19963.937ENSPTRG00000008539RPA19364.286Pan_troglodytes
ENSACLG00000006640rpa19964.000ENSPANG00000024592RPA19364.522Papio_anubis
ENSACLG00000006640rpa19973.684ENSPKIG00000008053rpa19373.684Paramormyrops_kingsleyae
ENSACLG00000006640rpa19964.747ENSPSIG00000015617RPA19564.747Pelodiscus_sinensis
ENSACLG00000006640rpa19985.560ENSPMGG00000011589rpa19685.560Periophthalmus_magnuspinnatus
ENSACLG00000006640rpa19962.545ENSPMGG00000000543RPA19962.230Periophthalmus_magnuspinnatus
ENSACLG00000006640rpa19963.811ENSPEMG00000021061Rpa19363.811Peromyscus_maniculatus_bairdii
ENSACLG00000006640rpa19963.542ENSPCIG00000019049RPA19363.021Phascolarctos_cinereus
ENSACLG00000006640rpa19984.369ENSPFOG00000003987rpa19484.369Poecilia_formosa
ENSACLG00000006640rpa19460.585ENSPLAG00000008844-9160.585Poecilia_latipinna
ENSACLG00000006640rpa19984.192ENSPLAG00000004984rpa19484.192Poecilia_latipinna
ENSACLG00000006640rpa19458.549ENSPMEG00000003627-9160.104Poecilia_mexicana
ENSACLG00000006640rpa19984.547ENSPMEG00000020602rpa19983.957Poecilia_mexicana
ENSACLG00000006640rpa19476.371ENSPREG00000010174rpa19076.371Poecilia_reticulata
ENSACLG00000006640rpa19372.082ENSPREG00000010119RPA17772.082Poecilia_reticulata
ENSACLG00000006640rpa19964.510ENSPCOG00000001799RPA19364.510Propithecus_coquereli
ENSACLG00000006640rpa19963.066ENSPVAG00000002149RPA19363.066Pteropus_vampyrus
ENSACLG00000006640rpa1100100.000ENSPNYG00000016316rpa199100.000Pundamilia_nyererei
ENSACLG00000006640rpa19962.500ENSPNYG00000024165RPA19462.500Pundamilia_nyererei
ENSACLG00000006640rpa19969.912ENSPNAG00000008599rpa19668.935Pygocentrus_nattereri
ENSACLG00000006640rpa19970.874ENSRNOG00000003123Rpa19364.161Rattus_norvegicus
ENSACLG00000006640rpa19964.348ENSRBIG00000036587RPA19364.348Rhinopithecus_bieti
ENSACLG00000006640rpa19959.130ENSRROG00000043278RPA19359.130Rhinopithecus_roxellana
ENSACLG00000006640rpa18036.444YAR007CRFA17236.444Saccharomyces_cerevisiae
ENSACLG00000006640rpa19763.750ENSSBOG00000030233RPA19763.750Saimiri_boliviensis_boliviensis
ENSACLG00000006640rpa19963.951ENSSHAG00000007969RPA19363.951Sarcophilus_harrisii
ENSACLG00000006640rpa19981.206ENSSFOG00015005362rpa18681.206Scleropages_formosus
ENSACLG00000006640rpa19372.146ENSSMAG00000019746RPA17872.146Scophthalmus_maximus
ENSACLG00000006640rpa19988.829ENSSDUG00000011949rpa19488.829Seriola_dumerili
ENSACLG00000006640rpa19272.917ENSSDUG00000016358RPA17672.603Seriola_dumerili
ENSACLG00000006640rpa19272.222ENSSLDG00000020784RPA17571.918Seriola_lalandi_dorsalis
ENSACLG00000006640rpa19989.189ENSSLDG00000011806rpa19489.189Seriola_lalandi_dorsalis
ENSACLG00000006640rpa18878.788ENSSARG00000007506RPA18478.788Sorex_araneus
ENSACLG00000006640rpa19962.632ENSSPUG00000007223RPA19562.632Sphenodon_punctatus
ENSACLG00000006640rpa19987.722ENSSPAG00000009903rpa19487.722Stegastes_partitus
ENSACLG00000006640rpa19965.771ENSSPAG00000011165RPA19565.536Stegastes_partitus
ENSACLG00000006640rpa19965.350ENSSSCG00000017822RPA19564.174Sus_scrofa
ENSACLG00000006640rpa19963.462ENSTGUG00000005775RPA19363.462Taeniopygia_guttata
ENSACLG00000006640rpa19982.826ENSTRUG00000003616rpa19382.826Takifugu_rubripes
ENSACLG00000006640rpa19171.729ENSTRUG00000000405RPA17271.330Takifugu_rubripes
ENSACLG00000006640rpa19982.927ENSTNIG00000016199rpa19483.101Tetraodon_nigroviridis
ENSACLG00000006640rpa17871.136ENSTBEG00000002709RPA17471.136Tupaia_belangeri
ENSACLG00000006640rpa19962.261ENSTTRG00000001169RPA19362.957Tursiops_truncatus
ENSACLG00000006640rpa18875.000ENSUAMG00000015676RPA19275.000Ursus_americanus
ENSACLG00000006640rpa19965.647ENSUMAG00000009328RPA19365.647Ursus_maritimus
ENSACLG00000006640rpa19962.957ENSVPAG00000009443RPA19462.957Vicugna_pacos
ENSACLG00000006640rpa19963.589ENSVVUG00000021715RPA19363.937Vulpes_vulpes
ENSACLG00000006640rpa19967.663ENSXETG00000013538rpa19367.311Xenopus_tropicalis
ENSACLG00000006640rpa19482.987ENSXCOG00000010068rpa19282.987Xiphophorus_couchianus
ENSACLG00000006640rpa19964.568ENSXCOG00000009899-9864.568Xiphophorus_couchianus
ENSACLG00000006640rpa19372.311ENSXMAG00000010333RPA17472.311Xiphophorus_maculatus
ENSACLG00000006640rpa19982.593ENSXMAG00000004102rpa19982.437Xiphophorus_maculatus

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