EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000006708 (Gene tree)
Gene ID: 113009937
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 13658 bases
Position: chr18:9747225-9760882
Accession: ZDB-GENE-040426-2159
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000009935	KH_1	PF00013.29	1.2e-67	1	4
ENSACLP00000009935	KH_1	PF00013.29	1.2e-67	2	4
ENSACLP00000009935	KH_1	PF00013.29	1.2e-67	3	4
ENSACLP00000009935	KH_1	PF00013.29	1.2e-67	4	4
ENSACLP00000009878	KH_1	PF00013.29	1.6e-67	1	4
ENSACLP00000009878	KH_1	PF00013.29	1.6e-67	2	4
ENSACLP00000009878	KH_1	PF00013.29	1.6e-67	3	4
ENSACLP00000009878	KH_1	PF00013.29	1.6e-67	4	4
ENSACLP00000009901	KH_1	PF00013.29	1.9e-67	1	4
ENSACLP00000009901	KH_1	PF00013.29	1.9e-67	2	4
ENSACLP00000009901	KH_1	PF00013.29	1.9e-67	3	4
ENSACLP00000009901	KH_1	PF00013.29	1.9e-67	4	4
ENSACLP00000009848	KH_1	PF00013.29	2e-67	1	4
ENSACLP00000009848	KH_1	PF00013.29	2e-67	2	4
ENSACLP00000009848	KH_1	PF00013.29	2e-67	3	4
ENSACLP00000009848	KH_1	PF00013.29	2e-67	4	4
ENSACLP00000009935	KH_2	PF07650.17	6.6e-21	1	2
ENSACLP00000009935	KH_2	PF07650.17	6.6e-21	2	2
ENSACLP00000009878	KH_2	PF07650.17	1.2e-20	1	2
ENSACLP00000009878	KH_2	PF07650.17	1.2e-20	2	2
ENSACLP00000009901	KH_2	PF07650.17	1.2e-20	1	2
ENSACLP00000009901	KH_2	PF07650.17	1.2e-20	2	2
ENSACLP00000009848	KH_2	PF07650.17	1.4e-20	1	2
ENSACLP00000009848	KH_2	PF07650.17	1.4e-20	2	2
ENSACLP00000009901	DUF1897	PF09005.10	2.6e-15	1	2
ENSACLP00000009901	DUF1897	PF09005.10	2.6e-15	2	2
ENSACLP00000009848	DUF1897	PF09005.10	2.8e-15	1	2
ENSACLP00000009848	DUF1897	PF09005.10	2.8e-15	2	2
ENSACLP00000009878	DUF1897	PF09005.10	1.1e-09	1	1
ENSACLP00000009935	DUF1897	PF09005.10	9.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000010169	-	1794	-	ENSACLP00000009935	597 (aa)	-	-
ENSACLT00000010132	-	2866	-	ENSACLP00000009901	652 (aa)	-	-
ENSACLT00000010074	-	4624	-	ENSACLP00000009848	671 (aa)	-	-
ENSACLT00000010105	-	4549	-	ENSACLP00000009878	646 (aa)	-	-

Gene Model

Click here to download ENSACLG00000006708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000006708's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000006708	fubp1	52	35.294	ENSACLG00000011835	pcbp3	64	34.568
ENSACLG00000006708	fubp1	59	34.375	ENSACLG00000003002	nova1	69	30.201
ENSACLG00000006708	fubp1	55	39.080	ENSACLG00000025246	-	52	38.043
ENSACLG00000006708	fubp1	60	30.357	ENSACLG00000015512	igf2bp2a	65	30.357
ENSACLG00000006708	fubp1	94	49.306	ENSACLG00000007655	-	92	56.174
ENSACLG00000006708	fubp1	96	54.154	ENSACLG00000001424	KHSRP	94	53.035
ENSACLG00000006708	fubp1	99	53.035	ENSACLG00000020487	khsrp	100	53.188
ENSACLG00000006708	fubp1	60	32.948	ENSACLG00000000050	igf2bp3	71	32.184
ENSACLG00000006708	fubp1	57	40.741	ENSACLG00000003801	-	70	40.741
ENSACLG00000006708	fubp1	63	41.176	ENSACLG00000018264	PCBP2	70	41.333
ENSACLG00000006708	fubp1	64	38.356	ENSACLG00000019285	zgc:110045	53	38.202
ENSACLG00000006708	fubp1	97	50.255	ENSACLG00000011819	fubp3	90	48.826

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000006708	fubp1	72	77.925	ENSG00000162613	FUBP1	99	71.166	Homo_sapiens
ENSACLG00000006708	fubp1	94	96.302	ENSAPOG00000014845	fubp1	92	96.764	Acanthochromis_polyacanthus
ENSACLG00000006708	fubp1	72	74.214	ENSAMEG00000007372	FUBP1	99	68.889	Ailuropoda_melanoleuca
ENSACLG00000006708	fubp1	100	88.960	ENSACIG00000020024	fubp1	99	90.363	Amphilophus_citrinellus
ENSACLG00000006708	fubp1	100	95.106	ENSAPEG00000012232	fubp1	100	95.106	Amphiprion_percula
ENSACLG00000006708	fubp1	100	97.099	ENSATEG00000018619	fubp1	100	97.099	Anabas_testudineus
ENSACLG00000006708	fubp1	66	79.661	ENSAPLG00000005965	FUBP1	100	72.177	Anas_platyrhynchos
ENSACLG00000006708	fubp1	72	74.207	ENSACAG00000006310	FUBP1	99	68.864	Anolis_carolinensis
ENSACLG00000006708	fubp1	87	84.296	ENSAMXG00000005525	fubp1	100	84.270	Astyanax_mexicanus
ENSACLG00000006708	fubp1	72	78.146	ENSCJAG00000007062	FUBP1	99	71.429	Callithrix_jacchus
ENSACLG00000006708	fubp1	72	77.974	ENSCAFG00000020361	FUBP1	99	71.319	Canis_familiaris
ENSACLG00000006708	fubp1	66	81.390	ENSTSYG00000000148	FUBP1	99	71.732	Carlito_syrichta
ENSACLG00000006708	fubp1	57	84.677	ENSCAPG00000011052	-	65	84.677	Cavia_aperea
ENSACLG00000006708	fubp1	72	77.753	ENSCPOG00000002757	FUBP1	98	71.145	Cavia_porcellus
ENSACLG00000006708	fubp1	91	64.183	ENSCCAG00000036537	FUBP1	100	64.756	Cebus_capucinus
ENSACLG00000006708	fubp1	72	77.753	ENSCATG00000042126	FUBP1	99	71.166	Cercocebus_atys
ENSACLG00000006708	fubp1	72	78.153	ENSCLAG00000005621	FUBP1	100	72.152	Chinchilla_lanigera
ENSACLG00000006708	fubp1	72	77.753	ENSCSAG00000001402	FUBP1	99	71.166	Chlorocebus_sabaeus
ENSACLG00000006708	fubp1	72	77.753	ENSCHOG00000008177	FUBP1	98	71.472	Choloepus_hoffmanni
ENSACLG00000006708	fubp1	72	79.018	ENSCGRG00001007103	Fubp1	99	71.692	Cricetulus_griseus_chok1gshd
ENSACLG00000006708	fubp1	66	79.469	ENSCGRG00000003372	Fubp1	99	71.545	Cricetulus_griseus_crigri
ENSACLG00000006708	fubp1	97	94.560	ENSCSEG00000021412	fubp1	98	93.920	Cynoglossus_semilaevis
ENSACLG00000006708	fubp1	99	93.558	ENSCVAG00000014487	fubp1	99	94.190	Cyprinodon_variegatus
ENSACLG00000006708	fubp1	100	82.021	ENSDARG00000029248	fubp1	100	83.507	Danio_rerio
ENSACLG00000006708	fubp1	77	58.209	ENSDNOG00000034565	-	78	59.091	Dasypus_novemcinctus
ENSACLG00000006708	fubp1	72	79.195	ENSDORG00000016534	Fubp1	98	71.319	Dipodomys_ordii
ENSACLG00000006708	fubp1	77	77.485	ENSETEG00000000948	-	59	78.324	Echinops_telfairi
ENSACLG00000006708	fubp1	82	49.060	ENSEBUG00000016143	fubp1	64	64.179	Eptatretus_burgeri
ENSACLG00000006708	fubp1	72	82.770	ENSEEUG00000001287	FUBP1	87	71.811	Erinaceus_europaeus
ENSACLG00000006708	fubp1	100	85.714	ENSELUG00000007990	fubp1	100	85.865	Esox_lucius
ENSACLG00000006708	fubp1	72	78.492	ENSFALG00000005768	FUBP1	100	71.772	Ficedula_albicollis
ENSACLG00000006708	fubp1	72	77.533	ENSFDAG00000014210	FUBP1	100	70.270	Fukomys_damarensis
ENSACLG00000006708	fubp1	100	94.190	ENSFHEG00000005230	fubp1	100	94.495	Fundulus_heteroclitus
ENSACLG00000006708	fubp1	100	83.968	ENSGMOG00000003370	fubp1	99	85.103	Gadus_morhua
ENSACLG00000006708	fubp1	72	78.982	ENSGALG00000008939	FUBP1	99	72.769	Gallus_gallus
ENSACLG00000006708	fubp1	100	92.782	ENSGAFG00000020972	fubp1	100	93.083	Gambusia_affinis
ENSACLG00000006708	fubp1	100	87.879	ENSGACG00000016563	fubp1	99	90.267	Gasterosteus_aculeatus
ENSACLG00000006708	fubp1	100	99.851	ENSHBUG00000009835	fubp1	100	99.851	Haplochromis_burtoni
ENSACLG00000006708	fubp1	73	73.420	ENSHGLG00000002808	-	99	65.426	Heterocephalus_glaber_female
ENSACLG00000006708	fubp1	72	77.753	ENSHGLG00000008415	-	100	72.152	Heterocephalus_glaber_female
ENSACLG00000006708	fubp1	72	77.753	ENSHGLG00100003417	-	99	71.450	Heterocephalus_glaber_male
ENSACLG00000006708	fubp1	73	74.074	ENSHGLG00100001414	-	99	66.052	Heterocephalus_glaber_male
ENSACLG00000006708	fubp1	100	91.045	ENSHCOG00000000910	fubp1	100	91.493	Hippocampus_comes
ENSACLG00000006708	fubp1	100	83.612	ENSIPUG00000009896	fubp1	100	84.825	Ictalurus_punctatus
ENSACLG00000006708	fubp1	72	80.594	ENSSTOG00000014312	FUBP1	100	71.319	Ictidomys_tridecemlineatus
ENSACLG00000006708	fubp1	72	79.505	ENSJJAG00000020069	Fubp1	99	71.692	Jaculus_jaculus
ENSACLG00000006708	fubp1	100	93.760	ENSKMAG00000018897	fubp1	100	93.760	Kryptolebias_marmoratus
ENSACLG00000006708	fubp1	99	92.388	ENSLBEG00000012700	fubp1	97	92.996	Labrus_bergylta
ENSACLG00000006708	fubp1	98	80.180	ENSLOCG00000003745	fubp1	99	80.265	Lepisosteus_oculatus
ENSACLG00000006708	fubp1	72	74.841	ENSLAFG00000003273	FUBP1	99	72.252	Loxodonta_africana
ENSACLG00000006708	fubp1	72	77.925	ENSMFAG00000031825	FUBP1	99	71.275	Macaca_fascicularis
ENSACLG00000006708	fubp1	72	80.365	ENSMMUG00000002899	FUBP1	99	71.166	Macaca_mulatta
ENSACLG00000006708	fubp1	72	77.753	ENSMNEG00000045212	FUBP1	99	71.166	Macaca_nemestrina
ENSACLG00000006708	fubp1	99	95.317	ENSMAMG00000007489	fubp1	99	95.331	Mastacembelus_armatus
ENSACLG00000006708	fubp1	100	99.847	ENSMZEG00005024298	fubp1	100	99.847	Maylandia_zebra
ENSACLG00000006708	fubp1	66	79.710	ENSMGAG00000009424	FUBP1	99	72.386	Meleagris_gallopavo
ENSACLG00000006708	fubp1	72	78.194	ENSMAUG00000016428	Fubp1	98	71.450	Mesocricetus_auratus
ENSACLG00000006708	fubp1	72	80.594	ENSMOCG00000014751	Fubp1	99	71.607	Microtus_ochrogaster
ENSACLG00000006708	fubp1	84	94.312	ENSMMOG00000019463	fubp1	99	93.750	Mola_mola
ENSACLG00000006708	fubp1	69	71.685	ENSMODG00000020804	FUBP1	100	66.823	Monodelphis_domestica
ENSACLG00000006708	fubp1	100	96.177	ENSMALG00000015173	fubp1	100	96.177	Monopterus_albus
ENSACLG00000006708	fubp1	72	78.396	MGP_CAROLIEiJ_G0025740	Fubp1	99	75.758	Mus_caroli
ENSACLG00000006708	fubp1	72	78.174	ENSMUSG00000028034	Fubp1	99	75.568	Mus_musculus
ENSACLG00000006708	fubp1	72	78.222	MGP_PahariEiJ_G0027191	Fubp1	99	75.614	Mus_pahari
ENSACLG00000006708	fubp1	72	78.396	MGP_SPRETEiJ_G0026693	Fubp1	99	75.758	Mus_spretus
ENSACLG00000006708	fubp1	72	74.059	ENSMLUG00000014802	FUBP1	99	68.879	Myotis_lucifugus
ENSACLG00000006708	fubp1	72	75.278	ENSNGAG00000014302	Fubp1	98	70.270	Nannospalax_galili
ENSACLG00000006708	fubp1	100	99.832	ENSNBRG00000015099	fubp1	100	99.832	Neolamprologus_brichardi
ENSACLG00000006708	fubp1	72	73.465	ENSNLEG00000009772	FUBP1	99	69.692	Nomascus_leucogenys
ENSACLG00000006708	fubp1	58	84.314	ENSMEUG00000007917	-	64	69.231	Notamacropus_eugenii
ENSACLG00000006708	fubp1	89	69.914	ENSOPRG00000001175	FUBP1	98	60.462	Ochotona_princeps
ENSACLG00000006708	fubp1	99	53.519	ENSODEG00000003657	-	100	51.899	Octodon_degus
ENSACLG00000006708	fubp1	72	77.753	ENSODEG00000002600	-	100	70.270	Octodon_degus
ENSACLG00000006708	fubp1	100	99.851	ENSONIG00000018381	fubp1	100	99.851	Oreochromis_niloticus
ENSACLG00000006708	fubp1	61	80.469	ENSOANG00000009777	FUBP1	99	71.475	Ornithorhynchus_anatinus
ENSACLG00000006708	fubp1	99	92.257	ENSORLG00000003540	fubp1	99	91.928	Oryzias_latipes
ENSACLG00000006708	fubp1	100	92.694	ENSORLG00020005908	fubp1	99	92.525	Oryzias_latipes_hni
ENSACLG00000006708	fubp1	100	92.553	ENSORLG00015008779	fubp1	99	92.988	Oryzias_latipes_hsok
ENSACLG00000006708	fubp1	100	92.988	ENSOMEG00000021943	fubp1	97	93.425	Oryzias_melastigma
ENSACLG00000006708	fubp1	72	73.904	ENSOGAG00000014233	FUBP1	99	68.630	Otolemur_garnettii
ENSACLG00000006708	fubp1	72	78.146	ENSOARG00000013259	FUBP1	100	72.741	Ovis_aries
ENSACLG00000006708	fubp1	72	77.974	ENSPPRG00000000413	FUBP1	99	71.319	Panthera_pardus
ENSACLG00000006708	fubp1	72	77.974	ENSPTIG00000019450	FUBP1	99	71.319	Panthera_tigris_altaica
ENSACLG00000006708	fubp1	68	78.810	ENSPSIG00000012965	FUBP1	99	71.906	Pelodiscus_sinensis
ENSACLG00000006708	fubp1	99	84.653	ENSPMGG00000009060	fubp1	99	83.037	Periophthalmus_magnuspinnatus
ENSACLG00000006708	fubp1	72	78.842	ENSPEMG00000021802	Fubp1	100	70.270	Peromyscus_maniculatus_bairdii
ENSACLG00000006708	fubp1	64	58.515	ENSPMAG00000001644	-	93	60.699	Petromyzon_marinus
ENSACLG00000006708	fubp1	100	94.648	ENSPFOG00000000238	fubp1	100	94.954	Poecilia_formosa
ENSACLG00000006708	fubp1	100	94.108	ENSPLAG00000021170	fubp1	100	94.108	Poecilia_latipinna
ENSACLG00000006708	fubp1	99	90.422	ENSPMEG00000004747	fubp1	99	96.656	Poecilia_mexicana
ENSACLG00000006708	fubp1	100	94.495	ENSPREG00000017911	fubp1	100	94.801	Poecilia_reticulata
ENSACLG00000006708	fubp1	74	77.371	ENSPPYG00000001219	-	68	78.901	Pongo_abelii
ENSACLG00000006708	fubp1	72	77.925	ENSPCAG00000012617	FUBP1	98	71.275	Procavia_capensis
ENSACLG00000006708	fubp1	72	78.924	ENSPCOG00000024974	FUBP1	99	71.319	Propithecus_coquereli
ENSACLG00000006708	fubp1	72	71.806	ENSPVAG00000014637	FUBP1	98	67.025	Pteropus_vampyrus
ENSACLG00000006708	fubp1	100	99.847	ENSPNYG00000004552	fubp1	100	99.847	Pundamilia_nyererei
ENSACLG00000006708	fubp1	100	85.174	ENSPNAG00000016207	fubp1	100	86.384	Pygocentrus_nattereri
ENSACLG00000006708	fubp1	72	78.396	ENSRNOG00000043370	Fubp1	99	71.538	Rattus_norvegicus
ENSACLG00000006708	fubp1	72	77.753	ENSRBIG00000042950	FUBP1	99	71.166	Rhinopithecus_bieti
ENSACLG00000006708	fubp1	72	77.753	ENSRROG00000043534	FUBP1	99	71.166	Rhinopithecus_roxellana
ENSACLG00000006708	fubp1	72	77.974	ENSSBOG00000027299	FUBP1	99	71.319	Saimiri_boliviensis_boliviensis
ENSACLG00000006708	fubp1	66	78.230	ENSSHAG00000005367	FUBP1	98	72.943	Sarcophilus_harrisii
ENSACLG00000006708	fubp1	99	83.871	ENSSFOG00015010213	fubp1	99	84.462	Scleropages_formosus
ENSACLG00000006708	fubp1	100	89.732	ENSSMAG00000012029	fubp1	98	89.881	Scophthalmus_maximus
ENSACLG00000006708	fubp1	100	96.350	ENSSDUG00000007383	fubp1	98	96.350	Seriola_dumerili
ENSACLG00000006708	fubp1	100	96.096	ENSSLDG00000022863	fubp1	98	96.229	Seriola_lalandi_dorsalis
ENSACLG00000006708	fubp1	72	87.356	ENSSARG00000011730	FUBP1	56	88.372	Sorex_araneus
ENSACLG00000006708	fubp1	99	69.298	ENSSPUG00000008389	FUBP1	99	73.684	Sphenodon_punctatus
ENSACLG00000006708	fubp1	100	98.012	ENSSPAG00000010161	fubp1	100	98.012	Stegastes_partitus
ENSACLG00000006708	fubp1	66	78.759	ENSTGUG00000006841	FUBP1	100	71.637	Taeniopygia_guttata
ENSACLG00000006708	fubp1	100	89.365	ENSTRUG00000004615	fubp1	100	88.479	Takifugu_rubripes
ENSACLG00000006708	fubp1	78	82.738	ENSTBEG00000017333	FUBP1	62	88.690	Tupaia_belangeri
ENSACLG00000006708	fubp1	72	77.974	ENSTTRG00000000096	FUBP1	98	71.166	Tursiops_truncatus
ENSACLG00000006708	fubp1	72	77.974	ENSVPAG00000004709	FUBP1	99	71.166	Vicugna_pacos
ENSACLG00000006708	fubp1	100	84.505	ENSXCOG00000019354	fubp1	99	83.070	Xiphophorus_couchianus
ENSACLG00000006708	fubp1	92	96.321	ENSXMAG00000007168	fubp1	99	96.321	Xiphophorus_maculatus