EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACLG00000006735 (Gene tree)
Gene ID
113018746
Gene Symbol
polr2a
Alias
im:7136071
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Astatotilapia_calliptera
Status
putative
Strand
Plus strand
Length
12727 bases
Position
chr3:17008982-17021708
Accession
113018746
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACLP00000009948RNA_pol_Rpb1_5PF04998.172.9e-10111
ENSACLP00000009917RNA_pol_Rpb1_5PF04998.173e-10111
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-29131
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-29231
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-29331
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-29431
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-29531
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-29631
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-29731
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-29831
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-29931
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-291031
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-291131
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-291231
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-291331
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-291431
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-291531
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-291631
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-291731
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-291831
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-291931
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-292031
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-292131
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-292231
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-292331
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-292431
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-292531
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-292631
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-292731
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-292831
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-292931
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-293031
ENSACLP00000009948RNA_pol_Rpb1_RPF05001.134.6e-293131
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-23132
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-23232
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-23332
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-23432
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-23532
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-23632
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-23732
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-23832
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-23932
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-231032
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-231132
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-231232
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-231332
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-231432
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-231532
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-231632
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-231732
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-231832
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-231932
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-232032
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-232132
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-232232
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-232332
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-232432
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-232532
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-232632
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-232732
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-232832
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-232932
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-233032
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-233132
ENSACLP00000009917RNA_pol_Rpb1_RPF05001.131.3e-233232
ENSACLP00000009948RNA_pol_Rpb1_4PF05000.171.4e-3711
ENSACLP00000009917RNA_pol_Rpb1_4PF05000.171.4e-3711
ENSACLP00000009948RNA_pol_Rpb1_2PF00623.207.3e-7511
ENSACLP00000009917RNA_pol_Rpb1_2PF00623.207.6e-7511
ENSACLP00000009948RNA_pol_Rpb1_3PF04983.183.5e-5011
ENSACLP00000009917RNA_pol_Rpb1_3PF04983.183.7e-5011
ENSACLP00000009948RNA_pol_Rpb1_1PF04997.121.2e-10811
ENSACLP00000009917RNA_pol_Rpb1_1PF04997.121.3e-10811
ENSACLP00000009948RNA_pol_Rpb1_7PF04990.122.3e-5511
ENSACLP00000009917RNA_pol_Rpb1_7PF04990.122.4e-5511
ENSACLP00000009948RNA_pol_Rpb1_6PF04992.146.6e-6711
ENSACLP00000009917RNA_pol_Rpb1_6PF04992.146.9e-6711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACLT00000010182-5787-ENSACLP000000099481928 (aa)--
ENSACLT00000010150-8582XM_026162087ENSACLP000000099171966 (aa)XP_026017872UPI0003299150
Gene Model
Click here to download ENSACLG00000006735's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000006735's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACLG00000006735polr2a6135.238ENSACLG00000020541polr1a7535.238
ENSACLG00000006735polr2a6838.512ENSACLG00000005914polr3a9138.300
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACLG00000006735polr2a8798.511ENSAPOG00000006552polr2a9098.511Acanthochromis_polyacanthus
ENSACLG00000006735polr2a8293.866ENSAMEG00000016265-8293.874Ailuropoda_melanoleuca
ENSACLG00000006735polr2a10099.015ENSACIG00000015982polr2a10099.015Amphilophus_citrinellus
ENSACLG00000006735polr2a10096.554ENSAOCG00000004255polr2a9398.539Amphiprion_ocellaris
ENSACLG00000006735polr2a10098.830ENSAPEG00000012623polr2a10098.830Amphiprion_percula
ENSACLG00000006735polr2a10098.728ENSATEG00000019644polr2a10098.728Anabas_testudineus
ENSACLG00000006735polr2a8294.472ENSACAG00000014561POLR2A8294.479Anolis_carolinensis
ENSACLG00000006735polr2a8294.227ENSANAG00000020093-8294.413Aotus_nancymaae
ENSACLG00000006735polr2a10097.614ENSAMXG00000020046polr2a10097.614Astyanax_mexicanus
ENSACLG00000006735polr2a8294.227ENSBTAG00000046765POLR2A8294.234Bos_taurus
ENSACLG00000006735polr2a9871.429WBGene00000123ama-19979.612Caenorhabditis_elegans
ENSACLG00000006735polr2a8694.165ENSCAFG00000016532POLR2A9994.172Canis_familiaris
ENSACLG00000006735polr2a8293.300ENSCAFG00020007929-8293.309Canis_lupus_dingo
ENSACLG00000006735polr2a8294.227ENSCHIG00000027173-8294.234Capra_hircus
ENSACLG00000006735polr2a9291.987ENSTSYG00000012803-8591.646Carlito_syrichta
ENSACLG00000006735polr2a9890.773ENSCAPG00000001882-10093.300Cavia_aperea
ENSACLG00000006735polr2a9988.659ENSCPOG00000014812-10093.056Cavia_porcellus
ENSACLG00000006735polr2a8294.227ENSCCAG00000020938-8294.413Cebus_capucinus
ENSACLG00000006735polr2a8294.165ENSCATG00000013680-8294.172Cercocebus_atys
ENSACLG00000006735polr2a8294.103ENSCLAG00000012196-8294.286Chinchilla_lanigera
ENSACLG00000006735polr2a8285.441ENSCSAG00000011644-8285.459Chlorocebus_sabaeus
ENSACLG00000006735polr2a9084.025ENSCPBG00000012697POLR2A9985.853Chrysemys_picta_bellii
ENSACLG00000006735polr2a9876.610ENSCING00000007884-9977.166Ciona_intestinalis
ENSACLG00000006735polr2a9879.630ENSCSAVG00000008334-9981.731Ciona_savignyi
ENSACLG00000006735polr2a8293.482ENSCANG00000010622-8293.490Colobus_angolensis_palliatus
ENSACLG00000006735polr2a8189.193ENSCGRG00001003538Polr2a8586.760Cricetulus_griseus_chok1gshd
ENSACLG00000006735polr2a8290.596ENSCGRG00000012105Polr2a9390.564Cricetulus_griseus_crigri
ENSACLG00000006735polr2a9997.457ENSCSEG00000002635polr2a10097.457Cynoglossus_semilaevis
ENSACLG00000006735polr2a10098.271ENSCVAG00000005156polr2a10098.271Cyprinodon_variegatus
ENSACLG00000006735polr2a10097.153ENSDARG00000099966polr2a10097.153Danio_rerio
ENSACLG00000006735polr2a8290.797ENSDNOG00000016482-8290.808Dasypus_novemcinctus
ENSACLG00000006735polr2a8294.227ENSDORG00000008667Polr2a8294.413Dipodomys_ordii
ENSACLG00000006735polr2a9970.148FBgn0003277RpII2159974.471Drosophila_melanogaster
ENSACLG00000006735polr2a9490.000ENSETEG00000002540-8791.096Echinops_telfairi
ENSACLG00000006735polr2a8287.149ENSEBUG00000013967polr2a8287.135Eptatretus_burgeri
ENSACLG00000006735polr2a8292.179ENSEASG00005019114-8392.188Equus_asinus_asinus
ENSACLG00000006735polr2a8294.227ENSECAG00000018485POLR2A8294.234Equus_caballus
ENSACLG00000006735polr2a8594.192ENSEEUG00000001154-9594.192Erinaceus_europaeus
ENSACLG00000006735polr2a8894.763ENSELUG00000014284polr2a8494.763Esox_lucius
ENSACLG00000006735polr2a8294.289ENSFDAG00000008287-8294.296Fukomys_damarensis
ENSACLG00000006735polr2a9997.704ENSFHEG00000001768polr2a10097.704Fundulus_heteroclitus
ENSACLG00000006735polr2a9992.410ENSGMOG00000007725polr2a10092.433Gadus_morhua
ENSACLG00000006735polr2a99100.000ENSGAFG00000005389polr2a10094.851Gambusia_affinis
ENSACLG00000006735polr2a9994.135ENSGACG00000019366polr2a10093.914Gasterosteus_aculeatus
ENSACLG00000006735polr2a8292.198ENSGGOG00000014800-9692.690Gorilla_gorilla
ENSACLG00000006735polr2a99100.000ENSHBUG00000018937polr2a100100.000Haplochromis_burtoni
ENSACLG00000006735polr2a8294.289ENSHGLG00000012381POLR2A8294.476Heterocephalus_glaber_female
ENSACLG00000006735polr2a8294.289ENSHGLG00100014843POLR2A8294.476Heterocephalus_glaber_male
ENSACLG00000006735polr2a10097.762ENSHCOG00000011874polr2a10097.762Hippocampus_comes
ENSACLG00000006735polr2a10097.355ENSIPUG00000002613Polr2a10097.355Ictalurus_punctatus
ENSACLG00000006735polr2a8294.227ENSSTOG00000001304-8294.413Ictidomys_tridecemlineatus
ENSACLG00000006735polr2a8294.227ENSJJAG00000013049Polr2a8294.413Jaculus_jaculus
ENSACLG00000006735polr2a82100.000ENSKMAG00000016343polr2a86100.000Kryptolebias_marmoratus
ENSACLG00000006735polr2a9998.219ENSLBEG00000027652polr2a10098.219Labrus_bergylta
ENSACLG00000006735polr2a8085.136ENSLACG00000012071POLR2A9193.367Latimeria_chalumnae
ENSACLG00000006735polr2a8996.408ENSLOCG00000013863polr2a9795.965Lepisosteus_oculatus
ENSACLG00000006735polr2a9991.006ENSLAFG00000008626-9794.234Loxodonta_africana
ENSACLG00000006735polr2a5192.850ENSMFAG00000007042-9992.850Macaca_fascicularis
ENSACLG00000006735polr2a8294.165ENSMMUG00000023620-9194.172Macaca_mulatta
ENSACLG00000006735polr2a8293.731ENSMNEG00000040407-8293.738Macaca_nemestrina
ENSACLG00000006735polr2a8089.818ENSMLEG00000030263-9992.850Mandrillus_leucophaeus
ENSACLG00000006735polr2a10098.474ENSMAMG00000003351polr2a10098.474Mastacembelus_armatus
ENSACLG00000006735polr2a100100.000ENSMZEG00005021429polr2a100100.000Maylandia_zebra
ENSACLG00000006735polr2a5194.088ENSMAUG00000021055-9994.088Mesocricetus_auratus
ENSACLG00000006735polr2a8294.165ENSMICG00000013372-9893.347Microcebus_murinus
ENSACLG00000006735polr2a9991.942ENSMOCG00000018279Polr2a10091.952Microtus_ochrogaster
ENSACLG00000006735polr2a9097.705ENSMMOG00000012515polr2a9297.705Mola_mola
ENSACLG00000006735polr2a8293.917ENSMODG00000007009-8293.924Monodelphis_domestica
ENSACLG00000006735polr2a9298.327ENSMALG00000008716polr2a9998.285Monopterus_albus
ENSACLG00000006735polr2a8294.227MGP_CAROLIEiJ_G0016587Polr2a8294.413Mus_caroli
ENSACLG00000006735polr2a8294.227ENSMUSG00000005198Polr2a8294.413Mus_musculus
ENSACLG00000006735polr2a8292.151MGP_PahariEiJ_G0017718Polr2a8292.160Mus_pahari
ENSACLG00000006735polr2a8294.227MGP_SPRETEiJ_G0017423Polr2a8294.413Mus_spretus
ENSACLG00000006735polr2a8294.227ENSMPUG00000009648-8294.234Mustela_putorius_furo
ENSACLG00000006735polr2a8293.738ENSMLUG00000009088-8293.746Myotis_lucifugus
ENSACLG00000006735polr2a8294.227ENSNGAG00000002543Polr2a8294.413Nannospalax_galili
ENSACLG00000006735polr2a10099.741ENSNBRG00000002005polr2a10099.741Neolamprologus_brichardi
ENSACLG00000006735polr2a8194.406ENSNLEG00000009460-8294.413Nomascus_leucogenys
ENSACLG00000006735polr2a9494.989ENSMEUG00000008611-9394.989Notamacropus_eugenii
ENSACLG00000006735polr2a8093.936ENSOPRG00000015116-9993.936Ochotona_princeps
ENSACLG00000006735polr2a8794.188ENSODEG00000017674-8589.827Octodon_degus
ENSACLG00000006735polr2a10099.644ENSONIG00000009231polr2a10099.644Oreochromis_niloticus
ENSACLG00000006735polr2a9990.172ENSOCUG00000017929-10094.110Oryctolagus_cuniculus
ENSACLG00000006735polr2a10098.288ENSORLG00000006431polr2a10098.288Oryzias_latipes
ENSACLG00000006735polr2a10098.288ENSORLG00020010235polr2a10098.288Oryzias_latipes_hni
ENSACLG00000006735polr2a10098.185ENSORLG00015007075polr2a10098.185Oryzias_latipes_hsok
ENSACLG00000006735polr2a9895.457ENSOMEG00000010713polr2a10097.822Oryzias_melastigma
ENSACLG00000006735polr2a8294.227ENSOGAG00000033608-8294.234Otolemur_garnettii
ENSACLG00000006735polr2a8994.227ENSOARG00000013874-9091.569Ovis_aries
ENSACLG00000006735polr2a8194.306ENSPPAG00000043734-8990.031Pan_paniscus
ENSACLG00000006735polr2a8194.406ENSPTRG00000008691POLR2A8294.413Pan_troglodytes
ENSACLG00000006735polr2a8293.482ENSPANG00000024099-8293.651Papio_anubis
ENSACLG00000006735polr2a7795.287ENSPKIG00000005727polr2a8595.287Paramormyrops_kingsleyae
ENSACLG00000006735polr2a9892.527ENSPSIG00000014006POLR2A10092.441Pelodiscus_sinensis
ENSACLG00000006735polr2a10097.324ENSPMGG00000019734polr2a10097.324Periophthalmus_magnuspinnatus
ENSACLG00000006735polr2a8294.227ENSPEMG00000012521Polr2a8294.413Peromyscus_maniculatus_bairdii
ENSACLG00000006735polr2a8693.921ENSPCIG00000028851-8293.921Phascolarctos_cinereus
ENSACLG00000006735polr2a9998.153ENSPFOG00000007890polr2a9998.153Poecilia_formosa
ENSACLG00000006735polr2a9998.153ENSPLAG00000007399polr2a9998.153Poecilia_latipinna
ENSACLG00000006735polr2a10098.169ENSPMEG00000002071polr2a9998.169Poecilia_mexicana
ENSACLG00000006735polr2a10098.185ENSPREG00000013122polr2a10098.185Poecilia_reticulata
ENSACLG00000006735polr2a8294.227ENSPPYG00000007924-8294.234Pongo_abelii
ENSACLG00000006735polr2a7495.000ENSPCAG00000006951-7495.000Procavia_capensis
ENSACLG00000006735polr2a8194.406ENSPCOG00000025260-8294.413Propithecus_coquereli
ENSACLG00000006735polr2a8293.917ENSPVAG00000005069-8293.924Pteropus_vampyrus
ENSACLG00000006735polr2a10099.949ENSPNYG00000022340polr2a10099.949Pundamilia_nyererei
ENSACLG00000006735polr2a10097.609ENSPNAG00000011237polr2a10097.609Pygocentrus_nattereri
ENSACLG00000006735polr2a8294.165ENSRNOG00000028834Polr2a8294.172Rattus_norvegicus
ENSACLG00000006735polr2a8293.855ENSRBIG00000002471-9193.862Rhinopithecus_bieti
ENSACLG00000006735polr2a8294.165ENSRROG00000029583-8993.366Rhinopithecus_roxellana
ENSACLG00000006735polr2a8250.940YDL140CRPO219983.544Saccharomyces_cerevisiae
ENSACLG00000006735polr2a8294.227ENSSBOG00000000808-8294.413Saimiri_boliviensis_boliviensis
ENSACLG00000006735polr2a9393.917ENSSHAG00000002858-8493.924Sarcophilus_harrisii
ENSACLG00000006735polr2a9997.358ENSSFOG00015023275polr2a10097.358Scleropages_formosus
ENSACLG00000006735polr2a10095.677ENSSMAG00000009137polr2a10095.219Scophthalmus_maximus
ENSACLG00000006735polr2a10098.779ENSSDUG00000020466polr2a10098.779Seriola_dumerili
ENSACLG00000006735polr2a10098.728ENSSLDG00000020613polr2a10098.728Seriola_lalandi_dorsalis
ENSACLG00000006735polr2a9589.892ENSSARG00000005875-9990.706Sorex_araneus
ENSACLG00000006735polr2a100100.000ENSSPAG00000016741polr2a95100.000Stegastes_partitus
ENSACLG00000006735polr2a8293.296ENSSSCG00000028278-8293.304Sus_scrofa
ENSACLG00000006735polr2a9892.511ENSTRUG00000012320polr2a8192.436Takifugu_rubripes
ENSACLG00000006735polr2a9296.650ENSTNIG00000010136polr2a10096.650Tetraodon_nigroviridis
ENSACLG00000006735polr2a7694.898ENSTBEG00000013294-5894.898Tupaia_belangeri
ENSACLG00000006735polr2a8292.551ENSTTRG00000014273-8292.560Tursiops_truncatus
ENSACLG00000006735polr2a9393.976ENSUAMG00000014866-10091.342Ursus_americanus
ENSACLG00000006735polr2a7491.602ENSUMAG00000015732-8391.061Ursus_maritimus
ENSACLG00000006735polr2a6598.370ENSVPAG00000008842-7698.370Vicugna_pacos
ENSACLG00000006735polr2a8294.165ENSVVUG00000027878-8394.172Vulpes_vulpes
ENSACLG00000006735polr2a8193.833ENSXETG00000012465polr2a8293.840Xenopus_tropicalis
ENSACLG00000006735polr2a9697.297ENSXCOG00000001804polr2a10097.297Xiphophorus_couchianus
ENSACLG00000006735polr2a10098.185ENSXMAG00000015687polr2a10098.185Xiphophorus_maculatus

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