EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000006798 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 1234 bases
Position: chr20:15508714-15509947
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000009952	RVT_1	PF00078.27	9.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000010186	-	1234	-	ENSACLP00000009952	315 (aa)	-	-

Gene Model

Click here to download ENSACLG00000006798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000006798's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000006798	-	100	34.700	ENSACLG00000006549	-	81	34.069
ENSACLG00000006798	-	90	32.394	ENSACLG00000009861	-	60	31.348
ENSACLG00000006798	-	74	30.043	ENSACLG00000021701	-	52	30.043
ENSACLG00000006798	-	88	30.686	ENSACLG00000013847	-	58	30.686
ENSACLG00000006798	-	91	40.411	ENSACLG00000010403	-	87	39.519
ENSACLG00000006798	-	82	33.080	ENSACLG00000013289	-	69	33.080
ENSACLG00000006798	-	100	35.331	ENSACLG00000021935	-	90	34.385
ENSACLG00000006798	-	99	33.861	ENSACLG00000001380	-	50	33.861
ENSACLG00000006798	-	100	37.778	ENSACLG00000020385	-	51	37.778
ENSACLG00000006798	-	100	35.016	ENSACLG00000018563	-	53	34.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000006798	-	99	32.698	ENSAPOG00000008925	-	81	32.698	Acanthochromis_polyacanthus
ENSACLG00000006798	-	90	35.563	ENSAPEG00000005752	-	70	33.856	Amphiprion_percula
ENSACLG00000006798	-	89	35.587	ENSAMXG00000031032	-	68	34.875	Astyanax_mexicanus
ENSACLG00000006798	-	95	34.000	ENSAMXG00000029182	-	71	34.000	Astyanax_mexicanus
ENSACLG00000006798	-	100	37.107	ENSAMXG00000038502	-	60	36.478	Astyanax_mexicanus
ENSACLG00000006798	-	100	37.695	ENSAMXG00000043469	-	64	37.072	Astyanax_mexicanus
ENSACLG00000006798	-	90	33.803	ENSAMXG00000039106	-	57	31.646	Astyanax_mexicanus
ENSACLG00000006798	-	91	34.722	ENSCPBG00000001687	-	89	34.722	Chrysemys_picta_bellii
ENSACLG00000006798	-	100	36.050	ENSCPBG00000001119	-	64	36.050	Chrysemys_picta_bellii
ENSACLG00000006798	-	100	32.278	ENSCPBG00000001369	-	53	31.646	Chrysemys_picta_bellii
ENSACLG00000006798	-	91	34.843	ENSCVAG00000001415	-	71	34.495	Cyprinodon_variegatus
ENSACLG00000006798	-	100	30.408	ENSEBUG00000001810	-	77	30.094	Eptatretus_burgeri
ENSACLG00000006798	-	82	66.154	ENSGAFG00000008149	-	92	66.154	Gambusia_affinis
ENSACLG00000006798	-	100	32.911	ENSGAGG00000013650	-	53	32.278	Gopherus_agassizii
ENSACLG00000006798	-	91	35.417	ENSGAGG00000022131	-	89	35.417	Gopherus_agassizii
ENSACLG00000006798	-	78	32.932	ENSGAGG00000022000	-	86	31.227	Gopherus_agassizii
ENSACLG00000006798	-	100	33.754	ENSHBUG00000016445	-	55	33.438	Haplochromis_burtoni
ENSACLG00000006798	-	96	35.831	ENSHBUG00000009088	-	77	35.831	Haplochromis_burtoni
ENSACLG00000006798	-	99	37.107	ENSIPUG00000003645	-	60	36.164	Ictalurus_punctatus
ENSACLG00000006798	-	96	43.131	ENSKMAG00000010799	-	86	43.131	Kryptolebias_marmoratus
ENSACLG00000006798	-	99	31.013	ENSKMAG00000007574	-	57	31.013	Kryptolebias_marmoratus
ENSACLG00000006798	-	99	33.333	ENSLBEG00000003912	-	75	32.698	Labrus_bergylta
ENSACLG00000006798	-	75	34.583	ENSLACG00000010227	-	89	34.167	Latimeria_chalumnae
ENSACLG00000006798	-	99	33.438	ENSLACG00000001892	-	85	33.125	Latimeria_chalumnae
ENSACLG00000006798	-	69	32.258	ENSLACG00000004732	-	58	31.336	Latimeria_chalumnae
ENSACLG00000006798	-	79	32.400	ENSLACG00000000029	-	63	32.400	Latimeria_chalumnae
ENSACLG00000006798	-	67	36.667	ENSLACG00000000714	-	98	36.667	Latimeria_chalumnae
ENSACLG00000006798	-	66	31.731	ENSLACG00000010373	-	77	31.731	Latimeria_chalumnae
ENSACLG00000006798	-	87	30.714	ENSLACG00000002249	-	96	30.714	Latimeria_chalumnae
ENSACLG00000006798	-	79	30.000	ENSLOCG00000017292	-	70	30.000	Lepisosteus_oculatus
ENSACLG00000006798	-	95	37.333	ENSMAMG00000004646	-	60	37.333	Mastacembelus_armatus
ENSACLG00000006798	-	90	32.394	ENSMZEG00005023829	-	59	31.348	Maylandia_zebra
ENSACLG00000006798	-	88	38.351	ENSMALG00000005075	-	80	37.993	Monopterus_albus
ENSACLG00000006798	-	83	37.931	ENSMALG00000020245	-	87	37.548	Monopterus_albus
ENSACLG00000006798	-	95	39.216	ENSNBRG00000002791	-	92	38.235	Neolamprologus_brichardi
ENSACLG00000006798	-	99	35.873	ENSNBRG00000002477	-	86	35.873	Neolamprologus_brichardi
ENSACLG00000006798	-	90	37.063	ENSONIG00000018991	-	92	37.063	Oreochromis_niloticus
ENSACLG00000006798	-	67	31.429	ENSORLG00000026658	-	77	31.429	Oryzias_latipes
ENSACLG00000006798	-	91	49.485	ENSORLG00000022742	-	76	48.797	Oryzias_latipes
ENSACLG00000006798	-	97	32.362	ENSORLG00000027869	-	62	32.362	Oryzias_latipes
ENSACLG00000006798	-	100	33.333	ENSORLG00000027231	-	56	33.333	Oryzias_latipes
ENSACLG00000006798	-	100	36.190	ENSORLG00000022411	-	82	34.921	Oryzias_latipes
ENSACLG00000006798	-	83	37.165	ENSORLG00020000154	-	58	37.165	Oryzias_latipes_hni
ENSACLG00000006798	-	100	32.915	ENSORLG00020009127	-	57	32.915	Oryzias_latipes_hni
ENSACLG00000006798	-	92	38.062	ENSORLG00020021288	-	83	37.370	Oryzias_latipes_hni
ENSACLG00000006798	-	99	34.906	ENSORLG00020012706	-	74	34.906	Oryzias_latipes_hni
ENSACLG00000006798	-	95	39.000	ENSORLG00020002705	-	88	38.411	Oryzias_latipes_hni
ENSACLG00000006798	-	100	35.737	ENSORLG00020016924	-	70	35.737	Oryzias_latipes_hni
ENSACLG00000006798	-	95	48.515	ENSORLG00020004454	-	75	47.855	Oryzias_latipes_hni
ENSACLG00000006798	-	73	35.498	ENSORLG00020016252	-	55	35.065	Oryzias_latipes_hni
ENSACLG00000006798	-	100	34.891	ENSORLG00015008138	-	56	34.579	Oryzias_latipes_hsok
ENSACLG00000006798	-	83	34.100	ENSORLG00015009803	-	50	34.100	Oryzias_latipes_hsok
ENSACLG00000006798	-	90	38.246	ENSORLG00015021822	-	69	37.544	Oryzias_latipes_hsok
ENSACLG00000006798	-	95	34.219	ENSOMEG00000007764	-	95	33.887	Oryzias_melastigma
ENSACLG00000006798	-	77	38.776	ENSPKIG00000019619	-	79	38.462	Paramormyrops_kingsleyae
ENSACLG00000006798	-	90	35.764	ENSPKIG00000007140	-	68	34.365	Paramormyrops_kingsleyae
ENSACLG00000006798	-	100	74.062	ENSPKIG00000003982	-	63	74.062	Paramormyrops_kingsleyae
ENSACLG00000006798	-	100	65.397	ENSPKIG00000004057	-	71	65.397	Paramormyrops_kingsleyae
ENSACLG00000006798	-	100	44.340	ENSPSIG00000000226	-	57	44.340	Pelodiscus_sinensis
ENSACLG00000006798	-	100	33.651	ENSPSIG00000001757	-	72	33.651	Pelodiscus_sinensis
ENSACLG00000006798	-	91	35.034	ENSPSIG00000002033	-	83	34.354	Pelodiscus_sinensis
ENSACLG00000006798	-	100	35.556	ENSPSIG00000000193	-	58	35.238	Pelodiscus_sinensis
ENSACLG00000006798	-	88	34.420	ENSPSIG00000001816	-	95	34.420	Pelodiscus_sinensis
ENSACLG00000006798	-	100	35.873	ENSPSIG00000001205	-	63	35.873	Pelodiscus_sinensis
ENSACLG00000006798	-	100	36.825	ENSPSIG00000001197	-	73	36.190	Pelodiscus_sinensis
ENSACLG00000006798	-	83	36.782	ENSPSIG00000001800	-	54	36.015	Pelodiscus_sinensis
ENSACLG00000006798	-	95	36.577	ENSPSIG00000014032	-	82	36.120	Pelodiscus_sinensis
ENSACLG00000006798	-	99	31.529	ENSPSIG00000001249	-	85	31.529	Pelodiscus_sinensis
ENSACLG00000006798	-	83	34.866	ENSPSIG00000000367	-	55	34.866	Pelodiscus_sinensis
ENSACLG00000006798	-	95	35.294	ENSPMEG00000019465	-	63	35.294	Poecilia_mexicana
ENSACLG00000006798	-	97	35.556	ENSPMEG00000018862	-	58	35.238	Poecilia_mexicana
ENSACLG00000006798	-	100	37.460	ENSPREG00000005117	-	64	37.460	Poecilia_reticulata
ENSACLG00000006798	-	100	38.095	ENSPREG00000006650	-	54	38.095	Poecilia_reticulata
ENSACLG00000006798	-	70	35.160	ENSPNYG00000004598	-	65	35.160	Pundamilia_nyererei
ENSACLG00000006798	-	66	34.783	ENSPNAG00000001979	-	72	33.971	Pygocentrus_nattereri
ENSACLG00000006798	-	99	36.164	ENSPNAG00000009058	-	59	36.164	Pygocentrus_nattereri
ENSACLG00000006798	-	100	33.333	ENSPNAG00000010299	-	59	32.710	Pygocentrus_nattereri
ENSACLG00000006798	-	90	35.211	ENSPNAG00000015949	-	68	35.211	Pygocentrus_nattereri
ENSACLG00000006798	-	100	74.545	ENSSFOG00015024061	-	54	73.939	Scleropages_formosus
ENSACLG00000006798	-	100	36.825	ENSSFOG00015015399	-	84	36.825	Scleropages_formosus
ENSACLG00000006798	-	95	36.364	ENSSFOG00015016168	-	65	36.364	Scleropages_formosus
ENSACLG00000006798	-	87	33.091	ENSTRUG00000024970	-	83	32.727	Takifugu_rubripes
ENSACLG00000006798	-	100	38.365	ENSXMAG00000025957	-	52	37.736	Xiphophorus_maculatus
ENSACLG00000006798	-	100	39.185	ENSXMAG00000023507	-	58	39.185	Xiphophorus_maculatus
ENSACLG00000006798	-	93	67.466	ENSXMAG00000027711	-	87	67.466	Xiphophorus_maculatus