EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000006900 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 1234 bases
Position: chr3:48913091-48914324
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000010094	RVT_1	PF00078.27	2.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000010335	-	1234	-	ENSACLP00000010094	356 (aa)	-	-

Gene Model

Click here to download ENSACLG00000006900's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000006900's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000006900	-	68	31.405	ENSACLG00000025726	-	50	31.405
ENSACLG00000006900	-	77	37.681	ENSACLG00000011319	-	72	37.681
ENSACLG00000006900	-	74	36.431	ENSACLG00000013571	-	66	37.500
ENSACLG00000006900	-	74	36.194	ENSACLG00000012857	-	73	36.194
ENSACLG00000006900	-	67	30.992	ENSACLG00000021049	-	65	30.992
ENSACLG00000006900	-	58	30.622	ENSACLG00000009990	-	56	30.622
ENSACLG00000006900	-	63	39.556	ENSACLG00000019432	-	50	39.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000006900	-	62	46.809	ENSEBUG00000005774	-	75	46.809	Eptatretus_burgeri
ENSACLG00000006900	-	77	41.667	ENSHBUG00000020868	-	67	41.667	Haplochromis_burtoni
ENSACLG00000006900	-	73	50.575	ENSLBEG00000018239	-	88	50.575	Labrus_bergylta
ENSACLG00000006900	-	56	31.527	ENSLOCG00000017441	-	59	31.527	Lepisosteus_oculatus
ENSACLG00000006900	-	60	44.340	ENSLOCG00000018030	-	59	44.340	Lepisosteus_oculatus
ENSACLG00000006900	-	53	38.095	ENSONIG00000020426	-	52	38.095	Oreochromis_niloticus
ENSACLG00000006900	-	61	33.937	ENSORLG00000029764	-	84	33.937	Oryzias_latipes
ENSACLG00000006900	-	72	36.260	ENSORLG00000029559	-	64	36.122	Oryzias_latipes
ENSACLG00000006900	-	74	37.218	ENSPLAG00000021304	-	63	37.218	Poecilia_latipinna
ENSACLG00000006900	-	67	41.667	ENSPMEG00000005418	-	63	41.667	Poecilia_mexicana
ENSACLG00000006900	-	75	36.803	ENSPMEG00000021732	-	66	36.803	Poecilia_mexicana
ENSACLG00000006900	-	72	36.822	ENSSFOG00015015726	-	82	36.822	Scleropages_formosus
ENSACLG00000006900	-	77	51.812	ENSSLDG00000000237	-	88	51.812	Seriola_lalandi_dorsalis
ENSACLG00000006900	-	58	60.386	ENSTNIG00000000750	-	69	60.386	Tetraodon_nigroviridis
ENSACLG00000006900	-	76	38.909	ENSXCOG00000012075	-	70	38.909	Xiphophorus_couchianus
ENSACLG00000006900	-	74	41.132	ENSXMAG00000028317	-	59	41.132	Xiphophorus_maculatus
ENSACLG00000006900	-	74	41.132	ENSXMAG00000020872	-	59	41.132	Xiphophorus_maculatus