EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000006949 (Gene tree)
Gene ID: 113029264
Gene Symbol: -
Alias: -
Full Name: RALY RNA binding protein like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 121810 bases
Position: chr9:23069973-23191782
Accession: 113029264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000010165	RRM_1	PF00076.22	1.5e-10	1	1
ENSACLP00000010204	RRM_1	PF00076.22	1.6e-10	1	1
ENSACLP00000010175	RRM_1	PF00076.22	1.7e-10	1	1
ENSACLP00000010191	RRM_1	PF00076.22	1.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000010434	-	1082	-	ENSACLP00000010191	311 (aa)	-	-
ENSACLT00000010417	-	1425	-	ENSACLP00000010175	311 (aa)	-	-
ENSACLT00000010449	-	879	-	ENSACLP00000010204	292 (aa)	-	-
ENSACLT00000010408	-	1374	-	ENSACLP00000010165	292 (aa)	XP_026035824	UPI00032A12C7

Gene Model

Click here to download ENSACLG00000006949's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000006949's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000006949	-	78	54.310	ENSACLG00000005707	-	94	50.987
ENSACLG00000006949	-	100	73.986	ENSACLG00000011720	-	100	73.986
ENSACLG00000006949	-	74	61.751	ENSACLG00000007561	raly	93	52.038
ENSACLG00000006949	-	74	59.641	ENSACLG00000000995	-	91	51.546
ENSACLG00000006949	-	73	58.065	ENSACLG00000013636	-	90	50.704

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000006949	-	100	71.959	ENSAPOG00000008744	-	100	71.959	Acanthochromis_polyacanthus
ENSACLG00000006949	-	97	67.354	ENSACIG00000007143	-	97	67.698	Amphilophus_citrinellus
ENSACLG00000006949	-	100	72.635	ENSAOCG00000023599	-	100	72.635	Amphiprion_ocellaris
ENSACLG00000006949	-	100	94.881	ENSAOCG00000001605	-	100	95.904	Amphiprion_ocellaris
ENSACLG00000006949	-	80	92.308	ENSATEG00000023356	-	90	93.590	Anabas_testudineus
ENSACLG00000006949	-	99	65.461	ENSATEG00000022219	-	93	71.333	Anabas_testudineus
ENSACLG00000006949	-	100	65.320	ENSAMXG00000032617	-	100	65.320	Astyanax_mexicanus
ENSACLG00000006949	-	100	90.753	ENSAMXG00000019031	-	100	90.753	Astyanax_mexicanus
ENSACLG00000006949	-	100	67.677	ENSCSEG00000014237	-	100	66.554	Cynoglossus_semilaevis
ENSACLG00000006949	-	100	71.959	ENSCVAG00000013624	-	100	71.959	Cyprinodon_variegatus
ENSACLG00000006949	-	100	92.517	ENSCVAG00000018104	-	100	93.878	Cyprinodon_variegatus
ENSACLG00000006949	-	59	76.608	ENSDARG00000090292	ralyl	81	78.395	Danio_rerio
ENSACLG00000006949	-	97	72.222	ENSELUG00000001702	-	97	76.071	Esox_lucius
ENSACLG00000006949	-	57	78.182	ENSGMOG00000005914	-	100	78.182	Gadus_morhua
ENSACLG00000006949	-	59	93.642	ENSGACG00000004991	-	91	95.783	Gasterosteus_aculeatus
ENSACLG00000006949	-	100	72.635	ENSHBUG00000010040	-	100	72.635	Haplochromis_burtoni
ENSACLG00000006949	-	100	100.000	ENSHBUG00000015412	-	100	100.000	Haplochromis_burtoni
ENSACLG00000006949	-	100	88.055	ENSIPUG00000000507	ralyl	100	90.102	Ictalurus_punctatus
ENSACLG00000006949	-	100	69.595	ENSKMAG00000022093	-	100	71.284	Kryptolebias_marmoratus
ENSACLG00000006949	-	100	93.857	ENSKMAG00000018155	-	100	94.539	Kryptolebias_marmoratus
ENSACLG00000006949	-	100	95.205	ENSLBEG00000011011	-	100	96.233	Labrus_bergylta
ENSACLG00000006949	-	100	72.973	ENSLBEG00000012873	-	100	72.973	Labrus_bergylta
ENSACLG00000006949	-	100	83.904	ENSLOCG00000012787	ralyl	99	83.219	Lepisosteus_oculatus
ENSACLG00000006949	-	99	69.655	ENSMAMG00000001723	-	97	68.276	Mastacembelus_armatus
ENSACLG00000006949	-	100	73.986	ENSMZEG00005024447	-	100	73.986	Maylandia_zebra
ENSACLG00000006949	-	100	100.000	ENSMZEG00005018748	-	100	100.000	Maylandia_zebra
ENSACLG00000006949	-	98	65.574	ENSMMOG00000020441	-	92	64.198	Mola_mola
ENSACLG00000006949	-	100	72.973	ENSMALG00000019019	-	78	72.973	Monopterus_albus
ENSACLG00000006949	-	100	93.857	ENSMALG00000012952	-	100	94.881	Monopterus_albus
ENSACLG00000006949	-	97	68.041	ENSNBRG00000011206	-	97	68.385	Neolamprologus_brichardi
ENSACLG00000006949	-	100	99.659	ENSNBRG00000011376	-	100	99.659	Neolamprologus_brichardi
ENSACLG00000006949	-	100	95.222	ENSORLG00000012719	-	100	96.246	Oryzias_latipes
ENSACLG00000006949	-	100	71.622	ENSORLG00000017934	-	100	71.284	Oryzias_latipes
ENSACLG00000006949	-	100	95.222	ENSORLG00020004438	-	100	96.246	Oryzias_latipes_hni
ENSACLG00000006949	-	100	71.284	ENSORLG00020000082	-	100	70.608	Oryzias_latipes_hni
ENSACLG00000006949	-	100	97.270	ENSORLG00015004727	-	100	97.270	Oryzias_latipes_hsok
ENSACLG00000006949	-	100	71.622	ENSORLG00015004280	-	100	71.284	Oryzias_latipes_hsok
ENSACLG00000006949	-	100	97.270	ENSOMEG00000001170	-	100	97.270	Oryzias_melastigma
ENSACLG00000006949	-	100	71.622	ENSOMEG00000011821	-	100	71.284	Oryzias_melastigma
ENSACLG00000006949	-	100	78.157	ENSPKIG00000015926	-	100	78.157	Paramormyrops_kingsleyae
ENSACLG00000006949	-	99	67.230	ENSPMGG00000009532	-	100	67.224	Periophthalmus_magnuspinnatus
ENSACLG00000006949	-	77	86.147	ENSPMGG00000014481	-	96	86.147	Periophthalmus_magnuspinnatus
ENSACLG00000006949	-	99	68.730	ENSPFOG00000006120	-	99	69.900	Poecilia_formosa
ENSACLG00000006949	-	97	96.167	ENSPLAG00000011323	ralyl	100	96.167	Poecilia_latipinna
ENSACLG00000006949	-	99	65.870	ENSPLAG00000009877	-	76	65.870	Poecilia_latipinna
ENSACLG00000006949	-	97	96.167	ENSPMEG00000023847	ralyl	100	96.167	Poecilia_mexicana
ENSACLG00000006949	-	99	65.870	ENSPMEG00000013624	-	80	65.870	Poecilia_mexicana
ENSACLG00000006949	-	97	95.105	ENSPREG00000001956	ralyl	100	95.105	Poecilia_reticulata
ENSACLG00000006949	-	99	71.672	ENSPREG00000013805	-	100	68.671	Poecilia_reticulata
ENSACLG00000006949	-	97	68.041	ENSPNYG00000008772	-	97	68.385	Pundamilia_nyererei
ENSACLG00000006949	-	100	100.000	ENSPNYG00000003548	-	100	100.000	Pundamilia_nyererei
ENSACLG00000006949	-	100	90.068	ENSPNAG00000000498	-	88	90.068	Pygocentrus_nattereri
ENSACLG00000006949	-	100	67.808	ENSPNAG00000026098	-	100	67.808	Pygocentrus_nattereri
ENSACLG00000006949	-	100	69.178	ENSSFOG00015004575	-	96	75.618	Scleropages_formosus
ENSACLG00000006949	-	100	89.116	ENSSFOG00015009401	-	100	89.116	Scleropages_formosus
ENSACLG00000006949	-	98	69.550	ENSSMAG00000015907	-	93	71.228	Scophthalmus_maximus
ENSACLG00000006949	-	100	95.548	ENSSMAG00000005608	-	100	95.548	Scophthalmus_maximus
ENSACLG00000006949	-	100	72.973	ENSSDUG00000012473	-	100	72.973	Seriola_dumerili
ENSACLG00000006949	-	100	95.222	ENSSDUG00000007587	-	100	96.246	Seriola_dumerili
ENSACLG00000006949	-	100	96.928	ENSSLDG00000020603	-	100	96.928	Seriola_lalandi_dorsalis
ENSACLG00000006949	-	100	72.635	ENSSLDG00000011534	-	100	72.635	Seriola_lalandi_dorsalis
ENSACLG00000006949	-	100	62.329	ENSSPAG00000013858	-	96	62.329	Stegastes_partitus
ENSACLG00000006949	-	83	74.486	ENSTRUG00000003829	-	95	71.731	Takifugu_rubripes
ENSACLG00000006949	-	98	67.114	ENSTNIG00000005594	-	99	68.027	Tetraodon_nigroviridis
ENSACLG00000006949	-	100	70.408	ENSXETG00000017729	ralyl	99	71.769	Xenopus_tropicalis
ENSACLG00000006949	-	97	93.220	ENSXCOG00000015156	-	93	93.559	Xiphophorus_couchianus
ENSACLG00000006949	-	100	72.973	ENSXMAG00000007614	-	100	72.973	Xiphophorus_maculatus
ENSACLG00000006949	-	100	97.270	ENSXMAG00000008396	-	100	97.270	Xiphophorus_maculatus