EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000007065 (Gene tree)
Gene ID: 113016328
Gene Symbol: -
Alias: -
Full Name: protein SON-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 105188 bases
Position: chr23:41476977-41582164
Accession: 113016328
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000010321	dsrm	PF00035.26	6.4e-12	1	1
ENSACLP00000010334	dsrm	PF00035.26	6.6e-12	1	1
ENSACLP00000010355	dsrm	PF00035.26	6.6e-12	1	1
ENSACLP00000010321	DND1_DSRM	PF14709.7	6.2e-12	1	1
ENSACLP00000010334	DND1_DSRM	PF14709.7	6.3e-12	1	1
ENSACLP00000010355	DND1_DSRM	PF14709.7	6.3e-12	1	1
ENSACLP00000010321	G-patch	PF01585.23	5e-12	1	1
ENSACLP00000010334	G-patch	PF01585.23	5.1e-12	1	1
ENSACLP00000010355	G-patch	PF01585.23	5.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000010604	-	4171	XM_026159082	ENSACLP00000010355	936 (aa)	XP_026014867	UPI000E41ED44
ENSACLT00000010570	-	4888	-	ENSACLP00000010321	930 (aa)	-	-
ENSACLT00000010583	-	4108	XM_026159129	ENSACLP00000010334	936 (aa)	XP_026014914	UPI000E41ED44

Gene Model

Click here to download ENSACLG00000007065's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000007065's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000007065	-	100	72.793	ENSAPOG00000000559	-	100	72.908	Acanthochromis_polyacanthus
ENSACLG00000007065	-	100	72.274	ENSAOCG00000004262	-	100	73.049	Amphiprion_ocellaris
ENSACLG00000007065	-	100	72.274	ENSAPEG00000009136	-	100	73.049	Amphiprion_percula
ENSACLG00000007065	-	59	86.413	ENSATEG00000012732	-	81	87.156	Anabas_testudineus
ENSACLG00000007065	-	57	66.370	ENSAMXG00000038259	-	64	64.947	Astyanax_mexicanus
ENSACLG00000007065	-	58	67.311	ENSELUG00000003878	-	68	68.214	Esox_lucius
ENSACLG00000007065	-	100	64.694	ENSFHEG00000019700	-	100	64.901	Fundulus_heteroclitus
ENSACLG00000007065	-	52	48.884	ENSGALG00000052354	-	72	52.778	Gallus_gallus
ENSACLG00000007065	-	100	65.005	ENSGAFG00000016463	-	100	63.843	Gambusia_affinis
ENSACLG00000007065	-	97	99.451	ENSHBUG00000001964	-	100	99.666	Haplochromis_burtoni
ENSACLG00000007065	-	100	66.632	ENSKMAG00000012003	-	100	66.667	Kryptolebias_marmoratus
ENSACLG00000007065	-	58	85.273	ENSLBEG00000008600	-	100	67.923	Labrus_bergylta
ENSACLG00000007065	-	97	65.101	ENSMAMG00000003082	-	100	64.043	Mastacembelus_armatus
ENSACLG00000007065	-	100	99.893	ENSMZEG00005018999	-	100	99.893	Maylandia_zebra
ENSACLG00000007065	-	53	46.123	ENSMGAG00000014526	-	97	45.594	Meleagris_gallopavo
ENSACLG00000007065	-	68	73.016	ENSONIG00000003775	-	97	74.603	Oreochromis_niloticus
ENSACLG00000007065	-	100	57.498	ENSORLG00000027334	-	59	78.506	Oryzias_latipes
ENSACLG00000007065	-	51	59.494	ENSPMGG00000015598	-	69	71.681	Periophthalmus_magnuspinnatus
ENSACLG00000007065	-	100	65.083	ENSPLAG00000008338	-	100	64.264	Poecilia_latipinna
ENSACLG00000007065	-	100	65.353	ENSPMEG00000017611	-	100	64.948	Poecilia_mexicana
ENSACLG00000007065	-	100	65.285	ENSPREG00000017979	-	100	64.566	Poecilia_reticulata
ENSACLG00000007065	-	100	68.033	ENSSMAG00000000065	-	99	71.886	Scophthalmus_maximus
ENSACLG00000007065	-	100	69.119	ENSSDUG00000018550	-	100	70.539	Seriola_dumerili
ENSACLG00000007065	-	100	73.593	ENSSPAG00000014575	-	100	74.616	Stegastes_partitus
ENSACLG00000007065	-	58	81.136	ENSTRUG00000019967	-	57	80.987	Takifugu_rubripes
ENSACLG00000007065	-	51	47.890	ENSXETG00000014115	son	99	47.753	Xenopus_tropicalis
ENSACLG00000007065	-	100	65.524	ENSXMAG00000025239	-	100	64.382	Xiphophorus_maculatus