EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000007108 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 7035 bases
Position: chr5:13162730-13169764
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000010410	LSM	PF01423.22	5.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000010640	-	4535	-	ENSACLP00000010392	149 (aa)	-	-
ENSACLT00000010659	-	420	-	ENSACLP00000010410	139 (aa)	-	-

Gene Model

Click here to download ENSACLG00000007108's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000007108's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000007108	-	57	32.927	ENSACLG00000001746	snrpd2	69	32.927
ENSACLG00000007108	-	70	100.000	ENSACLG00000001726	-	94	100.000
ENSACLG00000007108	-	54	34.667	ENSACLG00000012891	lsm5	85	34.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000007108	-	73	55.882	ENSSSCG00000033281	-	100	55.882	Sus_scrofa