EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000007232 (Gene tree)
Gene ID: 113026647
Gene Symbol: edc3
Alias: im:7151288|lsm16|wu:fb82d07|yjdc|zgc:112006
Full Name: enhancer of mRNA-decapping protein 3-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 5716 bases
Position: chr7:52506162-52511877
Accession: 113026647
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000010574	FDF	PF09532.10	1e-09	1	1
ENSACLP00000010583	FDF	PF09532.10	1e-09	1	1
ENSACLP00000010574	LSM14	PF12701.7	4.9e-11	1	1
ENSACLP00000010583	LSM14	PF12701.7	4.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000010824	-	4947	-	ENSACLP00000010574	478 (aa)	-	UPI0003BCF399
ENSACLT00000010834	-	4720	XM_026175666	ENSACLP00000010583	478 (aa)	XP_026031451	UPI0003BCF399

Gene Model

Click here to download ENSACLG00000007232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000007232's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000007232	edc3	99	65.904	ENSACLG00000018776	-	99	65.904

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000007232	edc3	100	67.780	ENSG00000179151	EDC3	100	81.481	Homo_sapiens
ENSACLG00000007232	edc3	100	92.678	ENSAPOG00000010791	edc3	100	92.678	Acanthochromis_polyacanthus
ENSACLG00000007232	edc3	100	59.514	ENSAPOG00000008655	EDC3	100	59.514	Acanthochromis_polyacanthus
ENSACLG00000007232	edc3	100	67.191	ENSAMEG00000008963	EDC3	100	67.191	Ailuropoda_melanoleuca
ENSACLG00000007232	edc3	100	97.071	ENSACIG00000017751	edc3	100	97.071	Amphilophus_citrinellus
ENSACLG00000007232	edc3	99	64.859	ENSACIG00000005330	EDC3	99	64.859	Amphilophus_citrinellus
ENSACLG00000007232	edc3	100	92.887	ENSAOCG00000005431	edc3	100	92.887	Amphiprion_ocellaris
ENSACLG00000007232	edc3	100	64.182	ENSAOCG00000009103	-	100	64.182	Amphiprion_ocellaris
ENSACLG00000007232	edc3	100	92.887	ENSAPEG00000000968	edc3	100	92.887	Amphiprion_percula
ENSACLG00000007232	edc3	100	64.389	ENSAPEG00000007841	EDC3	100	64.389	Amphiprion_percula
ENSACLG00000007232	edc3	100	66.736	ENSATEG00000004205	-	100	66.736	Anabas_testudineus
ENSACLG00000007232	edc3	100	93.724	ENSATEG00000015505	edc3	100	93.724	Anabas_testudineus
ENSACLG00000007232	edc3	83	73.869	ENSAPLG00000008957	EDC3	88	73.869	Anas_platyrhynchos
ENSACLG00000007232	edc3	77	65.657	ENSACAG00000000460	-	100	65.657	Anolis_carolinensis
ENSACLG00000007232	edc3	100	68.369	ENSANAG00000024078	EDC3	100	68.369	Aotus_nancymaae
ENSACLG00000007232	edc3	100	79.762	ENSAMXG00000001589	edc3	100	79.762	Astyanax_mexicanus
ENSACLG00000007232	edc3	100	67.583	ENSBTAG00000007308	EDC3	100	67.583	Bos_taurus
ENSACLG00000007232	edc3	100	67.976	ENSCJAG00000017681	EDC3	100	67.976	Callithrix_jacchus
ENSACLG00000007232	edc3	100	66.994	ENSCAFG00000017935	EDC3	100	66.994	Canis_familiaris
ENSACLG00000007232	edc3	100	66.994	ENSCAFG00020003909	EDC3	100	66.994	Canis_lupus_dingo
ENSACLG00000007232	edc3	100	67.583	ENSCHIG00000023658	EDC3	100	67.583	Capra_hircus
ENSACLG00000007232	edc3	100	68.173	ENSTSYG00000004822	EDC3	100	68.173	Carlito_syrichta
ENSACLG00000007232	edc3	100	67.780	ENSCPOG00000015595	EDC3	100	67.780	Cavia_porcellus
ENSACLG00000007232	edc3	100	67.780	ENSCCAG00000021663	EDC3	100	67.780	Cebus_capucinus
ENSACLG00000007232	edc3	100	68.369	ENSCATG00000037511	EDC3	100	68.369	Cercocebus_atys
ENSACLG00000007232	edc3	100	67.583	ENSCLAG00000005700	EDC3	100	67.583	Chinchilla_lanigera
ENSACLG00000007232	edc3	100	68.369	ENSCSAG00000014239	EDC3	100	68.369	Chlorocebus_sabaeus
ENSACLG00000007232	edc3	100	68.762	ENSCPBG00000024239	EDC3	100	68.762	Chrysemys_picta_bellii
ENSACLG00000007232	edc3	100	38.431	ENSCING00000022142	-	99	38.431	Ciona_intestinalis
ENSACLG00000007232	edc3	100	68.369	ENSCANG00000028699	EDC3	100	68.369	Colobus_angolensis_palliatus
ENSACLG00000007232	edc3	100	67.387	ENSCGRG00001013874	Edc3	100	67.387	Cricetulus_griseus_chok1gshd
ENSACLG00000007232	edc3	100	67.387	ENSCGRG00000011885	Edc3	100	67.387	Cricetulus_griseus_crigri
ENSACLG00000007232	edc3	99	91.614	ENSCSEG00000012996	edc3	99	91.614	Cynoglossus_semilaevis
ENSACLG00000007232	edc3	100	89.121	ENSCVAG00000008023	edc3	100	89.121	Cyprinodon_variegatus
ENSACLG00000007232	edc3	99	77.030	ENSDARG00000051931	edc3	99	77.030	Danio_rerio
ENSACLG00000007232	edc3	100	59.223	ENSDNOG00000030661	EDC3	100	59.223	Dasypus_novemcinctus
ENSACLG00000007232	edc3	68	81.481	ENSETEG00000002398	-	64	81.481	Echinops_telfairi
ENSACLG00000007232	edc3	100	67.387	ENSEASG00005005071	EDC3	100	67.387	Equus_asinus_asinus
ENSACLG00000007232	edc3	100	67.387	ENSECAG00000017994	EDC3	100	67.387	Equus_caballus
ENSACLG00000007232	edc3	100	80.579	ENSELUG00000005794	edc3	100	80.579	Esox_lucius
ENSACLG00000007232	edc3	100	71.250	ENSELUG00000007607	EDC3	100	71.250	Esox_lucius
ENSACLG00000007232	edc3	100	67.191	ENSFCAG00000002014	EDC3	100	67.191	Felis_catus
ENSACLG00000007232	edc3	98	67.269	ENSFALG00000004543	EDC3	96	67.269	Ficedula_albicollis
ENSACLG00000007232	edc3	100	68.369	ENSFDAG00000012582	EDC3	100	68.369	Fukomys_damarensis
ENSACLG00000007232	edc3	100	89.958	ENSFHEG00000009375	edc3	100	89.958	Fundulus_heteroclitus
ENSACLG00000007232	edc3	100	85.239	ENSGMOG00000002715	edc3	100	85.239	Gadus_morhua
ENSACLG00000007232	edc3	100	68.245	ENSGALG00000040181	EDC3	100	68.245	Gallus_gallus
ENSACLG00000007232	edc3	100	89.540	ENSGAFG00000014433	edc3	100	89.540	Gambusia_affinis
ENSACLG00000007232	edc3	100	90.167	ENSGACG00000009783	edc3	100	90.167	Gasterosteus_aculeatus
ENSACLG00000007232	edc3	99	61.448	ENSGACG00000014671	EDC3	99	61.448	Gasterosteus_aculeatus
ENSACLG00000007232	edc3	100	69.231	ENSGAGG00000023477	EDC3	100	69.231	Gopherus_agassizii
ENSACLG00000007232	edc3	100	67.780	ENSGGOG00000003552	EDC3	100	67.780	Gorilla_gorilla
ENSACLG00000007232	edc3	99	66.112	ENSHBUG00000020817	EDC3	99	66.112	Haplochromis_burtoni
ENSACLG00000007232	edc3	100	100.000	ENSHBUG00000003635	edc3	100	100.000	Haplochromis_burtoni
ENSACLG00000007232	edc3	100	86.458	ENSHCOG00000016834	edc3	100	86.458	Hippocampus_comes
ENSACLG00000007232	edc3	99	79.116	ENSIPUG00000005695	edc3	100	79.116	Ictalurus_punctatus
ENSACLG00000007232	edc3	100	68.566	ENSSTOG00000013936	EDC3	100	68.566	Ictidomys_tridecemlineatus
ENSACLG00000007232	edc3	100	67.583	ENSJJAG00000008074	Edc3	100	67.583	Jaculus_jaculus
ENSACLG00000007232	edc3	100	63.900	ENSKMAG00000001987	EDC3	100	63.900	Kryptolebias_marmoratus
ENSACLG00000007232	edc3	100	90.605	ENSKMAG00000001243	edc3	100	90.605	Kryptolebias_marmoratus
ENSACLG00000007232	edc3	100	64.476	ENSLBEG00000017984	EDC3	100	64.476	Labrus_bergylta
ENSACLG00000007232	edc3	100	91.213	ENSLBEG00000013435	edc3	99	91.213	Labrus_bergylta
ENSACLG00000007232	edc3	100	70.233	ENSLACG00000014149	EDC3	100	70.233	Latimeria_chalumnae
ENSACLG00000007232	edc3	99	72.065	ENSLOCG00000014625	edc3	99	72.267	Lepisosteus_oculatus
ENSACLG00000007232	edc3	100	67.913	ENSLAFG00000002992	EDC3	100	67.913	Loxodonta_africana
ENSACLG00000007232	edc3	100	67.780	ENSMFAG00000043074	EDC3	100	67.780	Macaca_fascicularis
ENSACLG00000007232	edc3	100	67.780	ENSMMUG00000011071	EDC3	100	67.780	Macaca_mulatta
ENSACLG00000007232	edc3	100	67.780	ENSMNEG00000035316	EDC3	100	67.780	Macaca_nemestrina
ENSACLG00000007232	edc3	100	68.369	ENSMLEG00000030372	EDC3	100	68.369	Mandrillus_leucophaeus
ENSACLG00000007232	edc3	100	92.050	ENSMAMG00000000505	edc3	100	92.050	Mastacembelus_armatus
ENSACLG00000007232	edc3	99	64.570	ENSMAMG00000005423	-	99	64.570	Mastacembelus_armatus
ENSACLG00000007232	edc3	99	65.440	ENSMZEG00005005654	EDC3	99	65.440	Maylandia_zebra
ENSACLG00000007232	edc3	100	99.791	ENSMZEG00005004892	edc3	100	99.791	Maylandia_zebra
ENSACLG00000007232	edc3	100	68.245	ENSMGAG00000002617	EDC3	100	68.245	Meleagris_gallopavo
ENSACLG00000007232	edc3	100	67.976	ENSMICG00000043190	EDC3	100	67.976	Microcebus_murinus
ENSACLG00000007232	edc3	100	67.780	ENSMOCG00000016205	Edc3	100	67.780	Microtus_ochrogaster
ENSACLG00000007232	edc3	99	92.243	ENSMMOG00000012278	edc3	99	92.243	Mola_mola
ENSACLG00000007232	edc3	100	67.976	ENSMODG00000009442	EDC3	100	67.976	Monodelphis_domestica
ENSACLG00000007232	edc3	100	93.305	ENSMALG00000008658	edc3	100	93.305	Monopterus_albus
ENSACLG00000007232	edc3	100	68.173	MGP_CAROLIEiJ_G0032280	Edc3	100	78.947	Mus_caroli
ENSACLG00000007232	edc3	100	68.173	ENSMUSG00000038957	Edc3	100	78.947	Mus_musculus
ENSACLG00000007232	edc3	100	68.173	MGP_PahariEiJ_G0015146	Edc3	100	78.947	Mus_pahari
ENSACLG00000007232	edc3	100	68.173	MGP_SPRETEiJ_G0033420	Edc3	100	78.947	Mus_spretus
ENSACLG00000007232	edc3	100	67.191	ENSMPUG00000017293	EDC3	100	67.191	Mustela_putorius_furo
ENSACLG00000007232	edc3	100	67.969	ENSMLUG00000016382	EDC3	100	67.969	Myotis_lucifugus
ENSACLG00000007232	edc3	100	67.780	ENSNGAG00000010923	Edc3	100	67.780	Nannospalax_galili
ENSACLG00000007232	edc3	99	66.183	ENSNBRG00000007881	EDC3	99	66.183	Neolamprologus_brichardi
ENSACLG00000007232	edc3	100	99.163	ENSNBRG00000002434	edc3	100	99.163	Neolamprologus_brichardi
ENSACLG00000007232	edc3	100	58.546	ENSNLEG00000014577	EDC3	100	58.546	Nomascus_leucogenys
ENSACLG00000007232	edc3	100	67.653	ENSMEUG00000009077	EDC3	100	67.653	Notamacropus_eugenii
ENSACLG00000007232	edc3	84	81.481	ENSOPRG00000009540	-	79	81.481	Ochotona_princeps
ENSACLG00000007232	edc3	100	99.372	ENSONIG00000008434	edc3	100	99.372	Oreochromis_niloticus
ENSACLG00000007232	edc3	100	61.896	ENSONIG00000002932	-	100	61.896	Oreochromis_niloticus
ENSACLG00000007232	edc3	77	63.728	ENSOCUG00000017740	EDC3	86	63.728	Oryctolagus_cuniculus
ENSACLG00000007232	edc3	100	87.056	ENSORLG00000004883	edc3	100	87.056	Oryzias_latipes
ENSACLG00000007232	edc3	100	63.278	ENSORLG00000014399	-	98	63.278	Oryzias_latipes
ENSACLG00000007232	edc3	100	87.474	ENSORLG00020012262	edc3	100	87.474	Oryzias_latipes_hni
ENSACLG00000007232	edc3	100	63.278	ENSORLG00020019446	-	100	63.278	Oryzias_latipes_hni
ENSACLG00000007232	edc3	100	87.683	ENSORLG00015005634	edc3	100	87.683	Oryzias_latipes_hsok
ENSACLG00000007232	edc3	100	63.278	ENSORLG00015017635	-	96	63.278	Oryzias_latipes_hsok
ENSACLG00000007232	edc3	100	87.448	ENSOMEG00000014026	edc3	100	87.448	Oryzias_melastigma
ENSACLG00000007232	edc3	100	64.596	ENSOMEG00000017354	EDC3	100	64.596	Oryzias_melastigma
ENSACLG00000007232	edc3	100	68.173	ENSOGAG00000014441	EDC3	100	68.369	Otolemur_garnettii
ENSACLG00000007232	edc3	100	66.863	ENSOARG00000003476	EDC3	100	67.255	Ovis_aries
ENSACLG00000007232	edc3	100	67.780	ENSPPAG00000040143	EDC3	100	67.780	Pan_paniscus
ENSACLG00000007232	edc3	100	67.191	ENSPPRG00000006257	EDC3	100	67.191	Panthera_pardus
ENSACLG00000007232	edc3	100	67.191	ENSPTIG00000017424	EDC3	100	67.191	Panthera_tigris_altaica
ENSACLG00000007232	edc3	100	67.780	ENSPTRG00000007279	EDC3	100	67.780	Pan_troglodytes
ENSACLG00000007232	edc3	100	68.369	ENSPANG00000015997	EDC3	100	68.369	Papio_anubis
ENSACLG00000007232	edc3	100	74.803	ENSPKIG00000004416	edc3	100	74.803	Paramormyrops_kingsleyae
ENSACLG00000007232	edc3	100	75.354	ENSPKIG00000019810	EDC3	100	75.354	Paramormyrops_kingsleyae
ENSACLG00000007232	edc3	100	64.244	ENSPSIG00000008474	EDC3	100	64.440	Pelodiscus_sinensis
ENSACLG00000007232	edc3	100	88.333	ENSPMGG00000007223	edc3	100	88.333	Periophthalmus_magnuspinnatus
ENSACLG00000007232	edc3	100	67.387	ENSPEMG00000015260	Edc3	100	67.387	Peromyscus_maniculatus_bairdii
ENSACLG00000007232	edc3	100	67.456	ENSPCIG00000006276	EDC3	70	67.589	Phascolarctos_cinereus
ENSACLG00000007232	edc3	100	89.958	ENSPFOG00000012204	edc3	100	89.958	Poecilia_formosa
ENSACLG00000007232	edc3	100	89.958	ENSPLAG00000014420	edc3	100	89.958	Poecilia_latipinna
ENSACLG00000007232	edc3	100	89.958	ENSPMEG00000023289	edc3	100	89.958	Poecilia_mexicana
ENSACLG00000007232	edc3	100	89.540	ENSPREG00000016022	edc3	100	89.540	Poecilia_reticulata
ENSACLG00000007232	edc3	100	67.387	ENSPPYG00000006642	EDC3	100	67.387	Pongo_abelii
ENSACLG00000007232	edc3	93	81.481	ENSPCAG00000002802	EDC3	88	81.481	Procavia_capensis
ENSACLG00000007232	edc3	100	67.780	ENSPCOG00000013364	EDC3	100	67.780	Propithecus_coquereli
ENSACLG00000007232	edc3	100	67.843	ENSPVAG00000014733	EDC3	100	67.843	Pteropus_vampyrus
ENSACLG00000007232	edc3	99	66.112	ENSPNYG00000009669	EDC3	99	66.112	Pundamilia_nyererei
ENSACLG00000007232	edc3	100	99.791	ENSPNYG00000021797	edc3	100	99.791	Pundamilia_nyererei
ENSACLG00000007232	edc3	100	80.159	ENSPNAG00000019657	edc3	100	80.159	Pygocentrus_nattereri
ENSACLG00000007232	edc3	99	68.182	ENSRNOG00000019579	Edc3	99	67.589	Rattus_norvegicus
ENSACLG00000007232	edc3	100	68.369	ENSRBIG00000019488	EDC3	100	68.369	Rhinopithecus_bieti
ENSACLG00000007232	edc3	100	68.369	ENSRROG00000034959	EDC3	100	68.369	Rhinopithecus_roxellana
ENSACLG00000007232	edc3	100	67.780	ENSSBOG00000004896	EDC3	100	67.780	Saimiri_boliviensis_boliviensis
ENSACLG00000007232	edc3	96	67.008	ENSSHAG00000015075	EDC3	95	67.008	Sarcophilus_harrisii
ENSACLG00000007232	edc3	100	78.728	ENSSFOG00015016939	edc3	100	78.728	Scleropages_formosus
ENSACLG00000007232	edc3	100	72.464	ENSSFOG00015002439	edc3	100	72.878	Scleropages_formosus
ENSACLG00000007232	edc3	100	91.632	ENSSMAG00000010695	edc3	100	91.632	Scophthalmus_maximus
ENSACLG00000007232	edc3	99	65.073	ENSSMAG00000010176	-	99	65.073	Scophthalmus_maximus
ENSACLG00000007232	edc3	100	92.887	ENSSDUG00000021844	edc3	100	92.887	Seriola_dumerili
ENSACLG00000007232	edc3	100	68.116	ENSSDUG00000007671	EDC3	100	68.116	Seriola_dumerili
ENSACLG00000007232	edc3	100	92.678	ENSSLDG00000022046	edc3	100	92.678	Seriola_lalandi_dorsalis
ENSACLG00000007232	edc3	79	77.823	ENSSARG00000003907	EDC3	80	77.823	Sorex_araneus
ENSACLG00000007232	edc3	100	67.191	ENSSPUG00000008232	EDC3	100	67.191	Sphenodon_punctatus
ENSACLG00000007232	edc3	100	65.424	ENSSPAG00000020327	EDC3	100	65.839	Stegastes_partitus
ENSACLG00000007232	edc3	100	93.515	ENSSPAG00000010009	edc3	100	93.515	Stegastes_partitus
ENSACLG00000007232	edc3	100	70.208	ENSSSCG00000001903	EDC3	100	70.208	Sus_scrofa
ENSACLG00000007232	edc3	100	68.639	ENSTGUG00000004007	EDC3	100	68.639	Taeniopygia_guttata
ENSACLG00000007232	edc3	100	89.540	ENSTRUG00000017078	edc3	100	89.540	Takifugu_rubripes
ENSACLG00000007232	edc3	100	88.542	ENSTNIG00000016047	edc3	100	88.542	Tetraodon_nigroviridis
ENSACLG00000007232	edc3	100	68.307	ENSTTRG00000007990	EDC3	100	68.307	Tursiops_truncatus
ENSACLG00000007232	edc3	100	67.191	ENSUAMG00000026710	-	100	67.191	Ursus_americanus
ENSACLG00000007232	edc3	100	67.191	ENSUMAG00000005006	EDC3	96	67.191	Ursus_maritimus
ENSACLG00000007232	edc3	84	72.222	ENSVPAG00000003499	-	79	72.222	Vicugna_pacos
ENSACLG00000007232	edc3	100	67.191	ENSVVUG00000018601	EDC3	100	67.191	Vulpes_vulpes
ENSACLG00000007232	edc3	72	73.639	ENSXETG00000010622	edc3	99	74.785	Xenopus_tropicalis
ENSACLG00000007232	edc3	100	89.540	ENSXMAG00000007377	edc3	100	89.540	Xiphophorus_maculatus