EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000007514 (Gene tree)
Gene ID: 113014364
Gene Symbol: rab42a
Alias: wu:fk59e12|zgc:73061
Full Name: RAB42%2C member RAS oncogene family a
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 2499 bases
Position: chr22:24828266-24830764
Accession: ZDB-GENE-040426-1983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000010959	MMR_HSR1	PF01926.23	9.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000011232	-	654	-	ENSACLP00000010959	217 (aa)	-	-

Gene Model

Click here to download ENSACLG00000007514's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000007514's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000007514	rab42a	79	41.860	ENSACLG00000007696	rab12	83	37.736
ENSACLG00000007514	rab42a	68	42.763	ENSACLG00000010965	-	63	42.763
ENSACLG00000007514	rab42a	75	41.718	ENSACLG00000026336	rab15	76	41.718
ENSACLG00000007514	rab42a	76	34.940	ENSACLG00000001218	RAB17	72	34.940
ENSACLG00000007514	rab42a	70	33.775	ENSACLG00000027515	KRAS	85	32.317
ENSACLG00000007514	rab42a	78	32.941	ENSACLG00000011249	rras	86	32.941
ENSACLG00000007514	rab42a	76	35.976	ENSACLG00000002706	rab5c	74	35.976
ENSACLG00000007514	rab42a	76	39.394	ENSACLG00000011484	rab18a	80	39.394
ENSACLG00000007514	rab42a	96	30.986	ENSACLG00000024456	-	96	30.986
ENSACLG00000007514	rab42a	98	35.211	ENSACLG00000001646	-	98	35.211
ENSACLG00000007514	rab42a	76	36.585	ENSACLG00000008615	-	73	36.585
ENSACLG00000007514	rab42a	90	31.841	ENSACLG00000005093	rab34a	75	31.841
ENSACLG00000007514	rab42a	72	43.671	ENSACLG00000005720	rab33ba	65	43.671
ENSACLG00000007514	rab42a	76	41.818	ENSACLG00000015289	rab18b	80	41.818
ENSACLG00000007514	rab42a	86	44.920	ENSACLG00000000860	-	79	44.920
ENSACLG00000007514	rab42a	73	37.654	ENSACLG00000008602	RAB29	98	37.654
ENSACLG00000007514	rab42a	100	54.378	ENSACLG00000009468	RAB39B	100	54.378
ENSACLG00000007514	rab42a	74	44.375	ENSACLG00000023526	rab30	78	44.375
ENSACLG00000007514	rab42a	53	31.579	ENSACLG00000014417	RAP2B	95	31.496
ENSACLG00000007514	rab42a	86	41.398	ENSACLG00000006329	-	86	41.398
ENSACLG00000007514	rab42a	75	38.922	ENSACLG00000006647	rab9a	82	38.922
ENSACLG00000007514	rab42a	72	34.177	ENSACLG00000002819	rab23	70	33.529
ENSACLG00000007514	rab42a	76	34.756	ENSACLG00000021470	rab22a	84	34.756
ENSACLG00000007514	rab42a	72	31.646	ENSACLG00000025632	rabl2	68	31.646
ENSACLG00000007514	rab42a	82	42.135	ENSACLG00000003326	-	87	42.135
ENSACLG00000007514	rab42a	75	34.337	ENSACLG00000018847	RAB7A	79	34.337
ENSACLG00000007514	rab42a	86	31.250	ENSACLG00000003898	rab32b	87	31.250
ENSACLG00000007514	rab42a	72	38.217	ENSACLG00000026487	rab6bb	76	38.562
ENSACLG00000007514	rab42a	82	39.665	ENSACLG00000018852	-	80	39.665
ENSACLG00000007514	rab42a	82	38.830	ENSACLG00000027006	zgc:101559	79	38.830
ENSACLG00000007514	rab42a	84	42.077	ENSACLG00000010268	rab11al	84	42.077
ENSACLG00000007514	rab42a	70	33.775	ENSACLG00000001181	hrasb	85	32.927
ENSACLG00000007514	rab42a	72	39.490	ENSACLG00000019423	rab41	73	39.490
ENSACLG00000007514	rab42a	82	42.135	ENSACLG00000007644	rab1ab	87	42.135
ENSACLG00000007514	rab42a	76	35.366	ENSACLG00000018066	rab5aa	75	35.366
ENSACLG00000007514	rab42a	84	41.530	ENSACLG00000007076	rab11bb	83	41.530
ENSACLG00000007514	rab42a	84	41.530	ENSACLG00000005446	-	83	41.530
ENSACLG00000007514	rab42a	86	33.333	ENSACLG00000008646	rheb	94	33.333
ENSACLG00000007514	rab42a	96	31.308	ENSACLG00000024502	-	96	31.308
ENSACLG00000007514	rab42a	68	41.216	ENSACLG00000021547	rab33a	53	41.216
ENSACLG00000007514	rab42a	75	39.521	ENSACLG00000004795	rab9b	74	39.521
ENSACLG00000007514	rab42a	98	38.498	ENSACLG00000013505	-	97	38.498
ENSACLG00000007514	rab42a	70	36.842	ENSACLG00000007804	si:ch73-116o1.2	79	36.145
ENSACLG00000007514	rab42a	97	33.333	ENSACLG00000025138	rab6ba	94	33.333
ENSACLG00000007514	rab42a	85	30.653	ENSACLG00000019293	rasl11a	75	30.653
ENSACLG00000007514	rab42a	76	31.138	ENSACLG00000009103	si:cabz01085950.1	82	31.138
ENSACLG00000007514	rab42a	76	44.242	ENSACLG00000018262	rab25a	78	44.242
ENSACLG00000007514	rab42a	78	42.012	ENSACLG00000019643	-	84	42.012
ENSACLG00000007514	rab42a	72	38.365	ENSACLG00000021109	si:dkey-13a21.4	76	38.365
ENSACLG00000007514	rab42a	94	38.537	ENSACLG00000010251	rab25b	91	38.537
ENSACLG00000007514	rab42a	80	43.353	ENSACLG00000013734	-	81	43.353
ENSACLG00000007514	rab42a	100	55.300	ENSACLG00000022893	-	100	55.300
ENSACLG00000007514	rab42a	70	33.775	ENSACLG00000027677	KRAS	85	32.317
ENSACLG00000007514	rab42a	84	41.530	ENSACLG00000001775	rab11a	84	41.530
ENSACLG00000007514	rab42a	100	55.300	ENSACLG00000027590	-	100	55.300
ENSACLG00000007514	rab42a	85	40.217	ENSACLG00000013668	rab1ba	91	40.217
ENSACLG00000007514	rab42a	79	33.526	ENSACLG00000005733	rab34b	65	33.526
ENSACLG00000007514	rab42a	82	43.017	ENSACLG00000005420	rab11ba	81	43.017
ENSACLG00000007514	rab42a	76	44.512	ENSACLG00000018721	si:dkey-16l2.16	77	44.512

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000007514	rab42a	100	96.330	ENSAPOG00000009188	rab42a	100	96.789	Acanthochromis_polyacanthus
ENSACLG00000007514	rab42a	100	97.248	ENSACIG00000003102	rab42a	100	97.248	Amphilophus_citrinellus
ENSACLG00000007514	rab42a	100	95.872	ENSAOCG00000012921	rab42a	83	96.330	Amphiprion_ocellaris
ENSACLG00000007514	rab42a	100	95.872	ENSAPEG00000007713	rab42a	83	96.330	Amphiprion_percula
ENSACLG00000007514	rab42a	100	94.954	ENSATEG00000009052	rab42a	100	94.954	Anabas_testudineus
ENSACLG00000007514	rab42a	100	91.705	ENSAMXG00000032729	rab42a	100	91.705	Astyanax_mexicanus
ENSACLG00000007514	rab42a	100	93.578	ENSCSEG00000010582	rab42a	100	93.578	Cynoglossus_semilaevis
ENSACLG00000007514	rab42a	90	49.746	ENSDARG00000102580	CU571310.1	93	49.746	Danio_rerio
ENSACLG00000007514	rab42a	100	91.244	ENSDARG00000034215	rab42a	100	91.244	Danio_rerio
ENSACLG00000007514	rab42a	100	90.783	ENSELUG00000010345	rab42a	100	90.783	Esox_lucius
ENSACLG00000007514	rab42a	100	95.413	ENSFHEG00000013106	rab42a	100	95.413	Fundulus_heteroclitus
ENSACLG00000007514	rab42a	100	94.037	ENSGAFG00000002141	rab42a	100	94.037	Gambusia_affinis
ENSACLG00000007514	rab42a	100	100.000	ENSHBUG00000015126	rab42a	82	100.000	Haplochromis_burtoni
ENSACLG00000007514	rab42a	100	88.479	ENSIPUG00000011376	rab42a	100	88.479	Ictalurus_punctatus
ENSACLG00000007514	rab42a	100	94.495	ENSKMAG00000007267	rab42a	100	94.495	Kryptolebias_marmoratus
ENSACLG00000007514	rab42a	100	95.392	ENSLBEG00000001193	rab42a	100	95.392	Labrus_bergylta
ENSACLG00000007514	rab42a	100	64.055	ENSLACG00000012755	-	100	64.055	Latimeria_chalumnae
ENSACLG00000007514	rab42a	100	50.917	ENSLOCG00000015825	-	99	50.917	Lepisosteus_oculatus
ENSACLG00000007514	rab42a	100	83.410	ENSLOCG00000003453	rab42a	100	83.410	Lepisosteus_oculatus
ENSACLG00000007514	rab42a	100	97.248	ENSMAMG00000002296	rab42a	100	97.248	Mastacembelus_armatus
ENSACLG00000007514	rab42a	100	100.000	ENSMZEG00005012460	rab42a	82	100.000	Maylandia_zebra
ENSACLG00000007514	rab42a	100	93.119	ENSMMOG00000014358	rab42a	100	93.119	Mola_mola
ENSACLG00000007514	rab42a	100	99.541	ENSNBRG00000021487	rab42a	82	99.541	Neolamprologus_brichardi
ENSACLG00000007514	rab42a	100	95.413	ENSORLG00000022335	rab42a	100	95.413	Oryzias_latipes
ENSACLG00000007514	rab42a	100	95.413	ENSORLG00020013895	rab42a	100	95.413	Oryzias_latipes_hni
ENSACLG00000007514	rab42a	100	95.413	ENSORLG00015004273	rab42a	100	95.413	Oryzias_latipes_hsok
ENSACLG00000007514	rab42a	100	95.413	ENSOMEG00000020418	rab42a	100	95.413	Oryzias_melastigma
ENSACLG00000007514	rab42a	99	47.685	ENSPKIG00000015234	-	99	47.685	Paramormyrops_kingsleyae
ENSACLG00000007514	rab42a	100	77.419	ENSPKIG00000021215	-	100	77.419	Paramormyrops_kingsleyae
ENSACLG00000007514	rab42a	91	97.462	ENSPMGG00000024112	rab42a	90	97.462	Periophthalmus_magnuspinnatus
ENSACLG00000007514	rab42a	100	93.578	ENSPFOG00000004838	rab42a	82	93.578	Poecilia_formosa
ENSACLG00000007514	rab42a	100	94.037	ENSPLAG00000005628	rab42a	100	94.037	Poecilia_latipinna
ENSACLG00000007514	rab42a	100	93.578	ENSPMEG00000019497	rab42a	100	93.578	Poecilia_mexicana
ENSACLG00000007514	rab42a	100	94.037	ENSPREG00000013962	rab42a	100	94.037	Poecilia_reticulata
ENSACLG00000007514	rab42a	100	100.000	ENSPNYG00000010325	rab42a	82	100.000	Pundamilia_nyererei
ENSACLG00000007514	rab42a	100	91.244	ENSPNAG00000016567	rab42a	100	91.244	Pygocentrus_nattereri
ENSACLG00000007514	rab42a	100	46.330	ENSSFOG00015016000	-	97	46.330	Scleropages_formosus
ENSACLG00000007514	rab42a	100	85.714	ENSSFOG00015020732	rab42a	100	85.714	Scleropages_formosus
ENSACLG00000007514	rab42a	100	94.037	ENSSMAG00000020311	rab42a	100	94.037	Scophthalmus_maximus
ENSACLG00000007514	rab42a	100	96.330	ENSSDUG00000011851	rab42a	100	96.330	Seriola_dumerili
ENSACLG00000007514	rab42a	100	96.330	ENSSLDG00000020354	rab42a	100	96.330	Seriola_lalandi_dorsalis
ENSACLG00000007514	rab42a	100	97.706	ENSSPAG00000016167	rab42a	100	97.706	Stegastes_partitus
ENSACLG00000007514	rab42a	100	95.872	ENSTRUG00000010224	rab42a	100	95.872	Takifugu_rubripes
ENSACLG00000007514	rab42a	100	94.495	ENSXCOG00000003428	rab42a	100	94.495	Xiphophorus_couchianus
ENSACLG00000007514	rab42a	100	94.495	ENSXMAG00000028376	rab42a	100	94.495	Xiphophorus_maculatus