EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000007595 (Gene tree)
Gene ID: 113036704
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 14838 bases
Position: chr14:12121617-12136454
Accession: 113036704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000011056	AARP2CN	PF08142.12	1.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000011332	-	4102	-	ENSACLP00000011056	828 (aa)	XP_026048929	UPI000E42C797

Gene Model

Click here to download ENSACLG00000007595's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000007595's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000007595	tsr1	97	55.800	ENSG00000167721	TSR1	98	55.678	Homo_sapiens
ENSACLG00000007595	tsr1	99	88.038	ENSAPOG00000020891	tsr1	100	88.756	Acanthochromis_polyacanthus
ENSACLG00000007595	tsr1	99	54.578	ENSAMEG00000007599	TSR1	99	54.251	Ailuropoda_melanoleuca
ENSACLG00000007595	tsr1	99	89.626	ENSACIG00000007090	tsr1	100	90.350	Amphilophus_citrinellus
ENSACLG00000007595	tsr1	99	87.380	ENSAOCG00000023284	tsr1	100	88.221	Amphiprion_ocellaris
ENSACLG00000007595	tsr1	93	87.226	ENSAPEG00000008452	tsr1	100	88.129	Amphiprion_percula
ENSACLG00000007595	tsr1	99	85.544	ENSATEG00000021961	tsr1	100	86.977	Anabas_testudineus
ENSACLG00000007595	tsr1	90	58.476	ENSAPLG00000013422	TSR1	100	58.060	Anas_platyrhynchos
ENSACLG00000007595	tsr1	71	50.422	ENSACAG00000000859	TSR1	92	49.747	Anolis_carolinensis
ENSACLG00000007595	tsr1	97	55.270	ENSANAG00000031071	TSR1	98	55.392	Aotus_nancymaae
ENSACLG00000007595	tsr1	50	75.418	ENSAMXG00000008470	tsr1	90	75.059	Astyanax_mexicanus
ENSACLG00000007595	tsr1	98	55.327	ENSBTAG00000004225	TSR1	99	55.850	Bos_taurus
ENSACLG00000007595	tsr1	96	39.088	WBGene00006497	tag-151	96	39.136	Caenorhabditis_elegans
ENSACLG00000007595	tsr1	97	54.590	ENSCJAG00000012456	TSR1	98	54.712	Callithrix_jacchus
ENSACLG00000007595	tsr1	89	53.200	ENSCAFG00000019273	-	100	56.686	Canis_familiaris
ENSACLG00000007595	tsr1	99	55.314	ENSCAFG00000002106	-	99	55.036	Canis_familiaris
ENSACLG00000007595	tsr1	99	55.193	ENSCAFG00020009728	TSR1	99	54.916	Canis_lupus_dingo
ENSACLG00000007595	tsr1	99	56.227	ENSCHIG00000023935	TSR1	99	56.265	Capra_hircus
ENSACLG00000007595	tsr1	99	55.461	ENSTSYG00000005468	TSR1	99	55.850	Carlito_syrichta
ENSACLG00000007595	tsr1	92	55.556	ENSCPOG00000014833	TSR1	99	55.339	Cavia_porcellus
ENSACLG00000007595	tsr1	92	53.706	ENSCCAG00000028962	TSR1	98	53.836	Cebus_capucinus
ENSACLG00000007595	tsr1	97	55.055	ENSCATG00000044262	TSR1	99	55.298	Cercocebus_atys
ENSACLG00000007595	tsr1	99	55.623	ENSCLAG00000005567	TSR1	99	56.010	Chinchilla_lanigera
ENSACLG00000007595	tsr1	97	55.177	ENSCSAG00000013788	TSR1	99	55.420	Chlorocebus_sabaeus
ENSACLG00000007595	tsr1	98	55.678	ENSCPBG00000020363	TSR1	97	55.181	Chrysemys_picta_bellii
ENSACLG00000007595	tsr1	96	44.568	ENSCING00000020658	-	99	43.842	Ciona_intestinalis
ENSACLG00000007595	tsr1	95	43.951	ENSCSAVG00000001875	-	100	43.966	Ciona_savignyi
ENSACLG00000007595	tsr1	97	49.939	ENSCANG00000033056	TSR1	99	51.585	Colobus_angolensis_palliatus
ENSACLG00000007595	tsr1	99	53.930	ENSCGRG00001023942	Tsr1	99	54.077	Cricetulus_griseus_chok1gshd
ENSACLG00000007595	tsr1	99	80.144	ENSCSEG00000013009	tsr1	100	80.746	Cynoglossus_semilaevis
ENSACLG00000007595	tsr1	99	84.439	ENSCVAG00000000506	tsr1	100	84.560	Cyprinodon_variegatus
ENSACLG00000007595	tsr1	99	75.451	ENSDARG00000007744	tsr1	100	75.841	Danio_rerio
ENSACLG00000007595	tsr1	99	56.643	ENSDNOG00000004715	TSR1	99	58.133	Dasypus_novemcinctus
ENSACLG00000007595	tsr1	95	49.054	ENSDORG00000023234	-	99	48.492	Dipodomys_ordii
ENSACLG00000007595	tsr1	99	55.260	ENSDORG00000016371	-	99	54.699	Dipodomys_ordii
ENSACLG00000007595	tsr1	96	44.169	FBgn0037073	Tsr1	96	43.926	Drosophila_melanogaster
ENSACLG00000007595	tsr1	89	67.541	ENSETEG00000017534	TSR1	89	67.541	Echinops_telfairi
ENSACLG00000007595	tsr1	95	52.010	ENSEBUG00000013731	TSR1	98	50.628	Eptatretus_burgeri
ENSACLG00000007595	tsr1	99	55.410	ENSEASG00005009302	TSR1	97	55.836	Equus_asinus_asinus
ENSACLG00000007595	tsr1	99	55.758	ENSECAG00000009114	TSR1	99	55.811	Equus_caballus
ENSACLG00000007595	tsr1	100	75.388	ENSELUG00000020984	tsr1	96	75.388	Esox_lucius
ENSACLG00000007595	tsr1	99	55.247	ENSFCAG00000006313	TSR1	99	55.342	Felis_catus
ENSACLG00000007595	tsr1	99	58.223	ENSFALG00000006532	TSR1	99	57.623	Ficedula_albicollis
ENSACLG00000007595	tsr1	99	55.569	ENSFDAG00000006038	TSR1	99	55.327	Fukomys_damarensis
ENSACLG00000007595	tsr1	100	83.194	ENSFHEG00000003626	tsr1	100	83.313	Fundulus_heteroclitus
ENSACLG00000007595	tsr1	99	73.317	ENSGMOG00000010336	tsr1	100	74.101	Gadus_morhua
ENSACLG00000007595	tsr1	100	84.091	ENSGAFG00000012993	tsr1	100	83.014	Gambusia_affinis
ENSACLG00000007595	tsr1	99	81.796	ENSGACG00000010843	tsr1	100	81.317	Gasterosteus_aculeatus
ENSACLG00000007595	tsr1	98	55.922	ENSGAGG00000025619	-	99	55.206	Gopherus_agassizii
ENSACLG00000007595	tsr1	97	55.922	ENSGGOG00000001704	TSR1	98	55.922	Gorilla_gorilla
ENSACLG00000007595	tsr1	100	99.519	ENSHBUG00000017904	tsr1	100	99.519	Haplochromis_burtoni
ENSACLG00000007595	tsr1	96	49.373	ENSHGLG00000015688	-	98	49.123	Heterocephalus_glaber_female
ENSACLG00000007595	tsr1	99	56.506	ENSHGLG00000012806	-	99	56.386	Heterocephalus_glaber_female
ENSACLG00000007595	tsr1	99	56.506	ENSHGLG00100015392	TSR1	99	56.386	Heterocephalus_glaber_male
ENSACLG00000007595	tsr1	99	80.797	ENSHCOG00000001432	tsr1	100	80.918	Hippocampus_comes
ENSACLG00000007595	tsr1	99	74.313	ENSIPUG00000004618	tsr1	100	74.552	Ictalurus_punctatus
ENSACLG00000007595	tsr1	99	56.506	ENSSTOG00000011819	TSR1	99	56.506	Ictidomys_tridecemlineatus
ENSACLG00000007595	tsr1	91	53.665	ENSJJAG00000019505	Tsr1	95	52.749	Jaculus_jaculus
ENSACLG00000007595	tsr1	100	83.612	ENSKMAG00000005763	tsr1	100	84.569	Kryptolebias_marmoratus
ENSACLG00000007595	tsr1	100	85.084	ENSLBEG00000021823	tsr1	100	85.680	Labrus_bergylta
ENSACLG00000007595	tsr1	99	57.346	ENSLACG00000002197	TSR1	100	57.348	Latimeria_chalumnae
ENSACLG00000007595	tsr1	99	56.731	ENSLOCG00000006491	TSR1	99	56.611	Lepisosteus_oculatus
ENSACLG00000007595	tsr1	99	54.940	ENSMFAG00000021330	TSR1	99	55.542	Macaca_fascicularis
ENSACLG00000007595	tsr1	99	54.819	ENSMMUG00000017519	TSR1	99	55.420	Macaca_mulatta
ENSACLG00000007595	tsr1	99	54.940	ENSMNEG00000031382	TSR1	99	55.542	Macaca_nemestrina
ENSACLG00000007595	tsr1	97	54.933	ENSMLEG00000036733	TSR1	99	55.177	Mandrillus_leucophaeus
ENSACLG00000007595	tsr1	100	84.561	ENSMAMG00000017918	tsr1	100	85.154	Mastacembelus_armatus
ENSACLG00000007595	tsr1	99	98.554	ENSMZEG00005007477	tsr1	100	98.554	Maylandia_zebra
ENSACLG00000007595	tsr1	99	56.886	ENSMGAG00000005576	TSR1	100	56.527	Meleagris_gallopavo
ENSACLG00000007595	tsr1	99	56.000	ENSMICG00000012943	TSR1	99	56.401	Microcebus_murinus
ENSACLG00000007595	tsr1	99	55.193	ENSMOCG00000022764	Tsr1	99	54.469	Microtus_ochrogaster
ENSACLG00000007595	tsr1	99	85.042	ENSMMOG00000014280	tsr1	100	85.766	Mola_mola
ENSACLG00000007595	tsr1	98	56.182	ENSMODG00000010658	TSR1	99	56.287	Monodelphis_domestica
ENSACLG00000007595	tsr1	99	87.050	ENSMALG00000011681	tsr1	100	87.050	Monopterus_albus
ENSACLG00000007595	tsr1	99	54.534	MGP_CAROLIEiJ_G0016727	Tsr1	99	54.371	Mus_caroli
ENSACLG00000007595	tsr1	99	55.381	ENSMUSG00000038335	Tsr1	99	55.210	Mus_musculus
ENSACLG00000007595	tsr1	99	55.865	MGP_PahariEiJ_G0017864	Tsr1	99	55.569	Mus_pahari
ENSACLG00000007595	tsr1	99	55.381	MGP_SPRETEiJ_G0017570	Tsr1	99	55.210	Mus_spretus
ENSACLG00000007595	tsr1	81	58.297	ENSMPUG00000013000	TSR1	100	57.872	Mustela_putorius_furo
ENSACLG00000007595	tsr1	99	55.744	ENSMLUG00000003505	TSR1	99	56.506	Myotis_lucifugus
ENSACLG00000007595	tsr1	100	97.844	ENSNBRG00000020728	tsr1	100	97.844	Neolamprologus_brichardi
ENSACLG00000007595	tsr1	97	52.142	ENSNLEG00000017184	TSR1	98	51.338	Nomascus_leucogenys
ENSACLG00000007595	tsr1	98	51.923	ENSMEUG00000015828	TSR1	99	52.500	Notamacropus_eugenii
ENSACLG00000007595	tsr1	99	94.306	ENSONIG00000013131	tsr1	100	94.306	Oreochromis_niloticus
ENSACLG00000007595	tsr1	95	53.059	ENSOANG00000008637	TSR1	100	52.809	Ornithorhynchus_anatinus
ENSACLG00000007595	tsr1	99	55.623	ENSOCUG00000014256	TSR1	99	55.422	Oryctolagus_cuniculus
ENSACLG00000007595	tsr1	100	85.287	ENSORLG00000004926	tsr1	100	85.167	Oryzias_latipes
ENSACLG00000007595	tsr1	100	85.167	ENSORLG00020008792	tsr1	100	84.928	Oryzias_latipes_hni
ENSACLG00000007595	tsr1	100	85.407	ENSORLG00015013838	tsr1	100	85.287	Oryzias_latipes_hsok
ENSACLG00000007595	tsr1	100	85.834	ENSOMEG00000004830	tsr1	100	86.074	Oryzias_melastigma
ENSACLG00000007595	tsr1	99	54.241	ENSOGAG00000004492	TSR1	99	54.796	Otolemur_garnettii
ENSACLG00000007595	tsr1	99	56.348	ENSOARG00000015437	TSR1	97	56.386	Ovis_aries
ENSACLG00000007595	tsr1	97	55.800	ENSPPAG00000036355	TSR1	98	55.678	Pan_paniscus
ENSACLG00000007595	tsr1	99	54.885	ENSPPRG00000015519	-	99	54.742	Panthera_pardus
ENSACLG00000007595	tsr1	99	55.006	ENSPTIG00000010608	TSR1	99	54.862	Panthera_tigris_altaica
ENSACLG00000007595	tsr1	97	55.800	ENSPTRG00000008547	TSR1	98	55.678	Pan_troglodytes
ENSACLG00000007595	tsr1	97	52.439	ENSPANG00000024463	TSR1	99	53.171	Papio_anubis
ENSACLG00000007595	tsr1	99	73.438	ENSPKIG00000013972	tsr1	100	73.045	Paramormyrops_kingsleyae
ENSACLG00000007595	tsr1	87	56.552	ENSPSIG00000018258	TSR1	99	55.433	Pelodiscus_sinensis
ENSACLG00000007595	tsr1	99	82.061	ENSPMGG00000011577	tsr1	99	81.939	Periophthalmus_magnuspinnatus
ENSACLG00000007595	tsr1	99	53.930	ENSPEMG00000018033	Tsr1	99	53.966	Peromyscus_maniculatus_bairdii
ENSACLG00000007595	tsr1	98	56.511	ENSPCIG00000009357	TSR1	97	56.071	Phascolarctos_cinereus
ENSACLG00000007595	tsr1	99	83.273	ENSPFOG00000004483	TSR1	100	85.078	Poecilia_formosa
ENSACLG00000007595	tsr1	100	82.956	ENSPLAG00000022320	tsr1	100	84.625	Poecilia_latipinna
ENSACLG00000007595	tsr1	100	83.075	ENSPMEG00000004577	tsr1	100	84.744	Poecilia_mexicana
ENSACLG00000007595	tsr1	97	84.049	ENSPREG00000010354	tsr1	96	84.314	Poecilia_reticulata
ENSACLG00000007595	tsr1	97	50.547	ENSPPYG00000007792	TSR1	98	50.668	Pongo_abelii
ENSACLG00000007595	tsr1	51	62.791	ENSPCAG00000012973	-	70	63.415	Procavia_capensis
ENSACLG00000007595	tsr1	99	55.394	ENSPCOG00000017928	TSR1	99	55.690	Propithecus_coquereli
ENSACLG00000007595	tsr1	99	55.340	ENSPVAG00000002162	TSR1	99	55.461	Pteropus_vampyrus
ENSACLG00000007595	tsr1	100	99.758	ENSPNYG00000016163	tsr1	100	99.758	Pundamilia_nyererei
ENSACLG00000007595	tsr1	99	75.476	ENSPNAG00000008659	tsr1	100	75.476	Pygocentrus_nattereri
ENSACLG00000007595	tsr1	99	55.018	ENSRNOG00000002980	Tsr1	99	54.556	Rattus_norvegicus
ENSACLG00000007595	tsr1	99	55.181	ENSRBIG00000040016	TSR1	99	55.222	Rhinopithecus_bieti
ENSACLG00000007595	tsr1	99	54.940	ENSRROG00000030361	TSR1	99	54.982	Rhinopithecus_roxellana
ENSACLG00000007595	tsr1	97	55.556	ENSSBOG00000020785	TSR1	98	55.664	Saimiri_boliviensis_boliviensis
ENSACLG00000007595	tsr1	98	56.679	ENSSHAG00000011394	TSR1	99	56.438	Sarcophilus_harrisii
ENSACLG00000007595	tsr1	99	76.029	ENSSFOG00015005455	tsr1	100	75.303	Scleropages_formosus
ENSACLG00000007595	tsr1	99	85.012	ENSSMAG00000009504	tsr1	100	85.851	Scophthalmus_maximus
ENSACLG00000007595	tsr1	100	87.962	ENSSDUG00000012074	tsr1	100	88.796	Seriola_dumerili
ENSACLG00000007595	tsr1	100	88.650	ENSSLDG00000002031	tsr1	100	88.769	Seriola_lalandi_dorsalis
ENSACLG00000007595	tsr1	92	56.400	ENSSARG00000000759	TSR1	93	56.400	Sorex_araneus
ENSACLG00000007595	tsr1	99	57.857	ENSSPUG00000007042	TSR1	99	57.882	Sphenodon_punctatus
ENSACLG00000007595	tsr1	99	86.754	ENSSPAG00000021951	tsr1	100	88.081	Stegastes_partitus
ENSACLG00000007595	tsr1	99	56.679	ENSSSCG00000038534	TSR1	99	56.062	Sus_scrofa
ENSACLG00000007595	tsr1	89	60.375	ENSTGUG00000005883	TSR1	100	58.644	Taeniopygia_guttata
ENSACLG00000007595	tsr1	99	83.394	ENSTRUG00000004665	tsr1	100	82.388	Takifugu_rubripes
ENSACLG00000007595	tsr1	99	82.482	ENSTNIG00000016196	tsr1	100	83.172	Tetraodon_nigroviridis
ENSACLG00000007595	tsr1	66	71.538	ENSTBEG00000015275	-	66	71.538	Tupaia_belangeri
ENSACLG00000007595	tsr1	99	56.711	ENSTTRG00000001177	TSR1	99	56.318	Tursiops_truncatus
ENSACLG00000007595	tsr1	99	55.060	ENSUAMG00000025160	TSR1	99	54.808	Ursus_americanus
ENSACLG00000007595	tsr1	95	55.031	ENSUMAG00000009294	TSR1	98	54.771	Ursus_maritimus
ENSACLG00000007595	tsr1	83	50.644	ENSVPAG00000000228	TSR1	99	50.285	Vicugna_pacos
ENSACLG00000007595	tsr1	99	55.314	ENSVVUG00000021767	TSR1	99	55.036	Vulpes_vulpes
ENSACLG00000007595	tsr1	99	52.512	ENSXETG00000023797	tsr1	100	52.506	Xenopus_tropicalis
ENSACLG00000007595	tsr1	99	83.595	ENSXCOG00000009635	tsr1	100	83.836	Xiphophorus_couchianus
ENSACLG00000007595	tsr1	100	83.473	ENSXMAG00000001397	tsr1	97	84.072	Xiphophorus_maculatus