EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000007633 (Gene tree)
Gene ID: 113015955
Gene Symbol: sf1
Alias: wu:fc09f06|znf162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 11783 bases
Position: chr3:814156-825938
Accession: ZDB-GENE-030131-2492
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000011262	KH_1	PF00013.29	4e-06	1	1
ENSACLP00000011218	zf-CCHC	PF00098.23	0.00053	1	1
ENSACLP00000011262	zf-CCHC	PF00098.23	0.00056	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000011500	-	1938	-	ENSACLP00000011218	645 (aa)	-	-
ENSACLT00000011543	-	1923	-	ENSACLP00000011262	640 (aa)	-	-

Gene Model

Click here to download ENSACLG00000007633's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000007633's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000007633	sf1	73	89.770	ENSAPOG00000012341	sf1	67	90.769	Acanthochromis_polyacanthus
ENSACLG00000007633	sf1	61	79.562	ENSAMEG00000017828	SF1	57	84.282	Ailuropoda_melanoleuca
ENSACLG00000007633	sf1	100	95.378	ENSACIG00000016514	sf1	100	95.378	Amphilophus_citrinellus
ENSACLG00000007633	sf1	97	87.311	ENSAOCG00000010934	sf1	67	90.989	Amphiprion_ocellaris
ENSACLG00000007633	sf1	97	87.311	ENSAPEG00000009498	sf1	67	90.989	Amphiprion_percula
ENSACLG00000007633	sf1	69	90.508	ENSATEG00000001894	sf1	67	91.189	Anabas_testudineus
ENSACLG00000007633	sf1	86	65.890	ENSANAG00000022607	-	88	75.204	Aotus_nancymaae
ENSACLG00000007633	sf1	62	79.419	ENSANAG00000026664	-	88	84.282	Aotus_nancymaae
ENSACLG00000007633	sf1	70	84.735	ENSAMXG00000003630	sf1	59	84.821	Astyanax_mexicanus
ENSACLG00000007633	sf1	84	71.306	ENSBTAG00000001035	SF1	61	84.282	Bos_taurus
ENSACLG00000007633	sf1	61	79.562	ENSCJAG00000002780	SF1	75	68.493	Callithrix_jacchus
ENSACLG00000007633	sf1	60	78.729	ENSCAFG00000014239	SF1	57	84.282	Canis_familiaris
ENSACLG00000007633	sf1	61	79.562	ENSCAFG00020014381	SF1	57	84.282	Canis_lupus_dingo
ENSACLG00000007633	sf1	61	79.562	ENSCHIG00000025867	SF1	67	84.282	Capra_hircus
ENSACLG00000007633	sf1	62	73.566	ENSTSYG00000033618	SF1	84	89.825	Carlito_syrichta
ENSACLG00000007633	sf1	61	79.805	ENSCAPG00000010762	SF1	65	84.824	Cavia_aperea
ENSACLG00000007633	sf1	61	79.805	ENSCPOG00000012290	SF1	68	84.824	Cavia_porcellus
ENSACLG00000007633	sf1	79	72.070	ENSCCAG00000023781	-	81	74.255	Cebus_capucinus
ENSACLG00000007633	sf1	61	82.045	ENSCCAG00000037881	SF1	88	84.282	Cebus_capucinus
ENSACLG00000007633	sf1	61	79.562	ENSCATG00000011564	SF1	88	84.282	Cercocebus_atys
ENSACLG00000007633	sf1	61	79.319	ENSCSAG00000007258	SF1	67	84.282	Chlorocebus_sabaeus
ENSACLG00000007633	sf1	59	74.242	ENSCHOG00000006008	SF1	66	78.531	Choloepus_hoffmanni
ENSACLG00000007633	sf1	62	55.847	ENSCING00000005564	-	92	52.814	Ciona_intestinalis
ENSACLG00000007633	sf1	62	52.163	ENSCSAVG00000009055	-	72	60.797	Ciona_savignyi
ENSACLG00000007633	sf1	61	79.562	ENSCANG00000042201	SF1	88	84.282	Colobus_angolensis_palliatus
ENSACLG00000007633	sf1	61	78.177	ENSCGRG00001003677	Sf1	64	84.824	Cricetulus_griseus_chok1gshd
ENSACLG00000007633	sf1	61	77.938	ENSCGRG00000001708	Sf1	67	84.824	Cricetulus_griseus_crigri
ENSACLG00000007633	sf1	97	86.015	ENSCSEG00000014375	sf1	94	81.146	Cynoglossus_semilaevis
ENSACLG00000007633	sf1	68	94.751	ENSCVAG00000001670	sf1	69	95.028	Cyprinodon_variegatus
ENSACLG00000007633	sf1	84	84.771	ENSDARG00000008188	sf1	65	90.984	Danio_rerio
ENSACLG00000007633	sf1	61	77.938	ENSDNOG00000001282	SF1	67	84.282	Dasypus_novemcinctus
ENSACLG00000007633	sf1	62	78.947	ENSDORG00000016334	Sf1	57	84.282	Dipodomys_ordii
ENSACLG00000007633	sf1	61	74.257	ENSETEG00000012830	SF1	51	76.776	Echinops_telfairi
ENSACLG00000007633	sf1	100	48.202	ENSEBUG00000012728	sf1	61	57.792	Eptatretus_burgeri
ENSACLG00000007633	sf1	61	79.562	ENSEASG00005018272	SF1	67	84.553	Equus_asinus_asinus
ENSACLG00000007633	sf1	61	79.562	ENSECAG00000024544	SF1	67	84.553	Equus_caballus
ENSACLG00000007633	sf1	55	78.976	ENSEEUG00000001058	SF1	83	84.802	Erinaceus_europaeus
ENSACLG00000007633	sf1	73	79.959	ENSELUG00000013225	sf1	60	83.442	Esox_lucius
ENSACLG00000007633	sf1	61	79.319	ENSFCAG00000012231	SF1	75	68.775	Felis_catus
ENSACLG00000007633	sf1	63	78.520	ENSFDAG00000009833	SF1	65	84.282	Fukomys_damarensis
ENSACLG00000007633	sf1	84	68.412	ENSGMOG00000007469	sf1	61	93.093	Gadus_morhua
ENSACLG00000007633	sf1	89	84.262	ENSGAFG00000019284	sf1	74	88.571	Gambusia_affinis
ENSACLG00000007633	sf1	84	77.442	ENSGACG00000000826	sf1	64	91.057	Gasterosteus_aculeatus
ENSACLG00000007633	sf1	77	69.697	ENSGAGG00000021691	SF1	68	70.902	Gopherus_agassizii
ENSACLG00000007633	sf1	100	94.273	ENSHBUG00000011598	sf1	100	94.273	Haplochromis_burtoni
ENSACLG00000007633	sf1	61	79.562	ENSHGLG00000009541	SF1	64	84.282	Heterocephalus_glaber_female
ENSACLG00000007633	sf1	58	72.525	ENSHGLG00100008255	-	70	79.480	Heterocephalus_glaber_male
ENSACLG00000007633	sf1	58	75.266	ENSHGLG00100008076	-	66	81.587	Heterocephalus_glaber_male
ENSACLG00000007633	sf1	61	79.562	ENSHGLG00100013879	-	64	85.345	Heterocephalus_glaber_male
ENSACLG00000007633	sf1	72	85.319	ENSHCOG00000011388	sf1	68	87.389	Hippocampus_comes
ENSACLG00000007633	sf1	61	79.562	ENSSTOG00000009790	-	58	84.282	Ictidomys_tridecemlineatus
ENSACLG00000007633	sf1	56	72.118	ENSSTOG00000024353	-	66	74.255	Ictidomys_tridecemlineatus
ENSACLG00000007633	sf1	61	79.805	ENSJJAG00000011788	Sf1	57	84.553	Jaculus_jaculus
ENSACLG00000007633	sf1	70	87.800	ENSKMAG00000005854	sf1	70	87.253	Kryptolebias_marmoratus
ENSACLG00000007633	sf1	97	68.598	ENSLBEG00000019836	sf1	72	87.174	Labrus_bergylta
ENSACLG00000007633	sf1	63	77.995	ENSLACG00000018493	SF1	67	79.620	Latimeria_chalumnae
ENSACLG00000007633	sf1	69	79.526	ENSLOCG00000002130	sf1	72	80.000	Lepisosteus_oculatus
ENSACLG00000007633	sf1	61	80.488	ENSLAFG00000007201	SF1	62	84.097	Loxodonta_africana
ENSACLG00000007633	sf1	61	79.562	ENSMFAG00000033122	SF1	88	84.282	Macaca_fascicularis
ENSACLG00000007633	sf1	60	80.856	ENSMMUG00000022606	SF1	89	84.282	Macaca_mulatta
ENSACLG00000007633	sf1	61	79.562	ENSMNEG00000037901	SF1	88	84.282	Macaca_nemestrina
ENSACLG00000007633	sf1	68	73.523	ENSMLEG00000040706	SF1	89	83.957	Mandrillus_leucophaeus
ENSACLG00000007633	sf1	69	91.667	ENSMAMG00000001780	sf1	67	91.685	Mastacembelus_armatus
ENSACLG00000007633	sf1	100	94.420	ENSMZEG00005009196	sf1	100	94.420	Maylandia_zebra
ENSACLG00000007633	sf1	60	78.973	ENSMAUG00000014064	Sf1	64	84.824	Mesocricetus_auratus
ENSACLG00000007633	sf1	61	79.562	ENSMICG00000001202	SF1	88	84.054	Microcebus_murinus
ENSACLG00000007633	sf1	61	79.562	ENSMOCG00000022038	Sf1	64	84.824	Microtus_ochrogaster
ENSACLG00000007633	sf1	69	90.766	ENSMMOG00000020474	sf1	67	90.826	Mola_mola
ENSACLG00000007633	sf1	61	78.469	ENSMODG00000029407	SF1	80	84.824	Monodelphis_domestica
ENSACLG00000007633	sf1	65	93.112	ENSMALG00000020521	sf1	73	93.128	Monopterus_albus
ENSACLG00000007633	sf1	61	78.177	MGP_CAROLIEiJ_G0022607	Sf1	99	95.489	Mus_caroli
ENSACLG00000007633	sf1	61	78.177	ENSMUSG00000024949	Sf1	99	95.489	Mus_musculus
ENSACLG00000007633	sf1	61	78.177	MGP_PahariEiJ_G0014101	Sf1	99	95.489	Mus_pahari
ENSACLG00000007633	sf1	61	78.177	MGP_SPRETEiJ_G0023518	Sf1	99	95.489	Mus_spretus
ENSACLG00000007633	sf1	61	79.412	ENSMPUG00000012684	SF1	57	84.282	Mustela_putorius_furo
ENSACLG00000007633	sf1	61	78.177	ENSMLUG00000015217	-	57	84.282	Myotis_lucifugus
ENSACLG00000007633	sf1	65	74.830	ENSMLUG00000029800	-	63	80.270	Myotis_lucifugus
ENSACLG00000007633	sf1	61	79.805	ENSNGAG00000005550	Sf1	64	84.553	Nannospalax_galili
ENSACLG00000007633	sf1	100	99.380	ENSNBRG00000017606	sf1	100	99.380	Neolamprologus_brichardi
ENSACLG00000007633	sf1	61	79.805	ENSNLEG00000005236	-	88	84.282	Nomascus_leucogenys
ENSACLG00000007633	sf1	59	77.427	ENSMEUG00000013424	SF1	69	84.973	Notamacropus_eugenii
ENSACLG00000007633	sf1	55	77.454	ENSOPRG00000005008	SF1	66	84.802	Ochotona_princeps
ENSACLG00000007633	sf1	61	77.129	ENSODEG00000006102	-	58	81.572	Octodon_degus
ENSACLG00000007633	sf1	100	94.126	ENSONIG00000015728	sf1	100	94.126	Oreochromis_niloticus
ENSACLG00000007633	sf1	51	74.640	ENSOANG00000002909	SF1	76	78.947	Ornithorhynchus_anatinus
ENSACLG00000007633	sf1	60	78.729	ENSOCUG00000026486	SF1	58	84.282	Oryctolagus_cuniculus
ENSACLG00000007633	sf1	71	85.991	ENSORLG00000011853	sf1	66	84.922	Oryzias_latipes
ENSACLG00000007633	sf1	97	86.322	ENSOMEG00000005210	sf1	97	81.611	Oryzias_melastigma
ENSACLG00000007633	sf1	61	79.562	ENSOGAG00000016196	SF1	57	84.282	Otolemur_garnettii
ENSACLG00000007633	sf1	61	79.562	ENSOARG00000009166	SF1	64	84.282	Ovis_aries
ENSACLG00000007633	sf1	61	79.805	ENSPPAG00000002799	-	89	84.282	Pan_paniscus
ENSACLG00000007633	sf1	61	79.319	ENSPPRG00000013566	SF1	58	85.393	Panthera_pardus
ENSACLG00000007633	sf1	61	79.562	ENSPTIG00000016141	SF1	66	84.282	Panthera_tigris_altaica
ENSACLG00000007633	sf1	63	79.475	ENSPTRG00000003846	SF1	88	84.282	Pan_troglodytes
ENSACLG00000007633	sf1	61	79.319	ENSPANG00000020754	SF1	88	84.282	Papio_anubis
ENSACLG00000007633	sf1	50	80.838	ENSPKIG00000012116	sf1	79	81.672	Paramormyrops_kingsleyae
ENSACLG00000007633	sf1	61	78.177	ENSPEMG00000010463	Sf1	64	84.824	Peromyscus_maniculatus_bairdii
ENSACLG00000007633	sf1	62	79.227	ENSPCIG00000018173	SF1	59	84.553	Phascolarctos_cinereus
ENSACLG00000007633	sf1	84	75.541	ENSPFOG00000013683	sf1	61	94.199	Poecilia_formosa
ENSACLG00000007633	sf1	90	85.251	ENSPLAG00000018076	sf1	62	88.264	Poecilia_latipinna
ENSACLG00000007633	sf1	60	78.729	ENSPPYG00000003098	-	69	84.282	Pongo_abelii
ENSACLG00000007633	sf1	62	78.657	ENSPCAG00000013631	SF1	61	77.197	Procavia_capensis
ENSACLG00000007633	sf1	61	79.562	ENSPCOG00000027546	SF1	88	84.054	Propithecus_coquereli
ENSACLG00000007633	sf1	62	77.778	ENSPVAG00000016938	SF1	75	69.461	Pteropus_vampyrus
ENSACLG00000007633	sf1	100	94.420	ENSPNYG00000004673	sf1	100	94.420	Pundamilia_nyererei
ENSACLG00000007633	sf1	70	84.257	ENSPNAG00000013072	sf1	67	84.152	Pygocentrus_nattereri
ENSACLG00000007633	sf1	61	78.177	ENSRNOG00000021085	Sf1	60	84.590	Rattus_norvegicus
ENSACLG00000007633	sf1	61	79.562	ENSRBIG00000042818	SF1	88	84.282	Rhinopithecus_bieti
ENSACLG00000007633	sf1	62	79.327	ENSRROG00000045655	SF1	89	83.957	Rhinopithecus_roxellana
ENSACLG00000007633	sf1	63	36.792	YLR116W	MSL5	56	44.565	Saccharomyces_cerevisiae
ENSACLG00000007633	sf1	82	66.259	ENSSBOG00000022267	-	84	74.344	Saimiri_boliviensis_boliviensis
ENSACLG00000007633	sf1	60	82.609	ENSSHAG00000006841	SF1	68	85.714	Sarcophilus_harrisii
ENSACLG00000007633	sf1	83	85.000	ENSSMAG00000007549	sf1	70	87.364	Scophthalmus_maximus
ENSACLG00000007633	sf1	60	74.447	ENSSARG00000008180	SF1	71	79.133	Sorex_araneus
ENSACLG00000007633	sf1	60	79.621	ENSSPUG00000012907	SF1	58	87.393	Sphenodon_punctatus
ENSACLG00000007633	sf1	97	88.218	ENSSPAG00000019060	sf1	67	91.868	Stegastes_partitus
ENSACLG00000007633	sf1	61	78.177	ENSSSCG00000013021	SF1	67	84.282	Sus_scrofa
ENSACLG00000007633	sf1	74	70.937	ENSTNIG00000004820	sf1	72	78.590	Tetraodon_nigroviridis
ENSACLG00000007633	sf1	61	73.284	ENSTBEG00000013133	SF1	62	68.764	Tupaia_belangeri
ENSACLG00000007633	sf1	61	72.902	ENSTTRG00000008857	SF1	67	79.133	Tursiops_truncatus
ENSACLG00000007633	sf1	61	79.562	ENSUMAG00000007268	SF1	70	84.282	Ursus_maritimus
ENSACLG00000007633	sf1	61	79.319	ENSVVUG00000028585	SF1	67	84.282	Vulpes_vulpes
ENSACLG00000007633	sf1	86	71.577	ENSXETG00000008434	sf1	62	87.006	Xenopus_tropicalis
ENSACLG00000007633	sf1	74	84.134	ENSXCOG00000003704	sf1	69	94.413	Xiphophorus_couchianus
ENSACLG00000007633	sf1	97	85.973	ENSXMAG00000007822	sf1	70	89.035	Xiphophorus_maculatus