EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000007675 (Gene tree)
Gene ID: -
Gene Symbol: zgc:153215
Alias: fe11g10|im:6907990|wu:fe11g10
Full Name: zgc:153215
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 1716 bases
Position: chr11:19457017-19458732
Accession: ZDB-GENE-061103-58
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000011197	RRM_1	PF00076.22	3.1e-22	1	2
ENSACLP00000011197	RRM_1	PF00076.22	3.1e-22	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000011477	-	1512	-	ENSACLP00000011197	503 (aa)	-	-

Gene Model

Click here to download ENSACLG00000007675's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000007675's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000007675	zgc:153215	93	31.973	ENSACLG00000005578	rbm12b	63	31.973
ENSACLG00000007675	zgc:153215	99	30.019	ENSACLG00000005575	rbm12b	72	30.019

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000007675	zgc:153215	95	56.973	ENSAPOG00000008836	zgc:153215	97	56.973	Acanthochromis_polyacanthus
ENSACLG00000007675	zgc:153215	98	71.094	ENSACIG00000013317	zgc:153215	99	71.094	Amphilophus_citrinellus
ENSACLG00000007675	zgc:153215	83	47.727	ENSACIG00000014943	rbm12b	96	47.727	Amphilophus_citrinellus
ENSACLG00000007675	zgc:153215	100	55.769	ENSAOCG00000010819	zgc:153215	99	55.769	Amphiprion_ocellaris
ENSACLG00000007675	zgc:153215	99	31.395	ENSAPEG00000022079	rbm12b	99	30.220	Amphiprion_percula
ENSACLG00000007675	zgc:153215	100	54.437	ENSATEG00000001886	zgc:153215	99	54.437	Anabas_testudineus
ENSACLG00000007675	zgc:153215	84	51.613	ENSAMXG00000020853	zgc:153215	99	34.202	Astyanax_mexicanus
ENSACLG00000007675	zgc:153215	80	47.761	ENSCSEG00000001575	-	99	47.761	Cynoglossus_semilaevis
ENSACLG00000007675	zgc:153215	99	45.041	ENSCVAG00000009259	-	99	45.041	Cyprinodon_variegatus
ENSACLG00000007675	zgc:153215	99	39.698	ENSDARG00000055889	zgc:153215	99	39.698	Danio_rerio
ENSACLG00000007675	zgc:153215	100	39.828	ENSELUG00000009039	zgc:153215	97	40.760	Esox_lucius
ENSACLG00000007675	zgc:153215	86	55.056	ENSFHEG00000014539	zgc:153215	95	55.056	Fundulus_heteroclitus
ENSACLG00000007675	zgc:153215	100	30.095	ENSFHEG00000016425	rbm12b	74	30.095	Fundulus_heteroclitus
ENSACLG00000007675	zgc:153215	99	30.286	ENSGMOG00000013467	rbm12b	74	30.286	Gadus_morhua
ENSACLG00000007675	zgc:153215	98	49.698	ENSGAFG00000007845	zgc:153215	98	49.698	Gambusia_affinis
ENSACLG00000007675	zgc:153215	100	87.566	ENSHBUG00000016150	zgc:153215	100	87.566	Haplochromis_burtoni
ENSACLG00000007675	zgc:153215	100	36.754	ENSIPUG00000019731	zgc:153215	99	36.754	Ictalurus_punctatus
ENSACLG00000007675	zgc:153215	99	50.838	ENSKMAG00000004958	zgc:153215	99	50.838	Kryptolebias_marmoratus
ENSACLG00000007675	zgc:153215	100	57.283	ENSLBEG00000002597	zgc:153215	99	57.874	Labrus_bergylta
ENSACLG00000007675	zgc:153215	99	32.765	ENSLOCG00000018344	rbm12b	74	32.576	Lepisosteus_oculatus
ENSACLG00000007675	zgc:153215	99	30.210	ENSMAMG00000011998	rbm12b	74	30.210	Mastacembelus_armatus
ENSACLG00000007675	zgc:153215	100	53.968	ENSMAMG00000012038	zgc:153215	99	53.968	Mastacembelus_armatus
ENSACLG00000007675	zgc:153215	100	87.566	ENSMZEG00005005435	zgc:153215	100	87.566	Maylandia_zebra
ENSACLG00000007675	zgc:153215	84	43.182	ENSMMOG00000002404	rbm12b	69	43.182	Mola_mola
ENSACLG00000007675	zgc:153215	97	61.628	ENSMMOG00000003372	zgc:153215	99	61.628	Mola_mola
ENSACLG00000007675	zgc:153215	99	55.952	ENSMALG00000001222	zgc:153215	99	55.952	Monopterus_albus
ENSACLG00000007675	zgc:153215	100	85.639	ENSNBRG00000013644	zgc:153215	100	85.639	Neolamprologus_brichardi
ENSACLG00000007675	zgc:153215	100	90.787	ENSONIG00000006054	zgc:153215	100	90.787	Oreochromis_niloticus
ENSACLG00000007675	zgc:153215	91	67.073	ENSOMEG00000004220	zgc:153215	96	46.063	Oryzias_melastigma
ENSACLG00000007675	zgc:153215	99	31.380	ENSPKIG00000018719	rbm12b	73	31.380	Paramormyrops_kingsleyae
ENSACLG00000007675	zgc:153215	99	36.660	ENSPKIG00000014851	zgc:153215	99	36.660	Paramormyrops_kingsleyae
ENSACLG00000007675	zgc:153215	99	53.731	ENSPFOG00000017451	zgc:153215	98	53.731	Poecilia_formosa
ENSACLG00000007675	zgc:153215	90	51.818	ENSPLAG00000000232	zgc:153215	99	51.818	Poecilia_latipinna
ENSACLG00000007675	zgc:153215	94	53.153	ENSPMEG00000016662	zgc:153215	99	53.153	Poecilia_mexicana
ENSACLG00000007675	zgc:153215	99	49.407	ENSPREG00000018608	zgc:153215	99	49.407	Poecilia_reticulata
ENSACLG00000007675	zgc:153215	85	97.872	ENSPNYG00000018125	zgc:153215	97	97.872	Pundamilia_nyererei
ENSACLG00000007675	zgc:153215	99	30.019	ENSPNYG00000016696	rbm12b	74	30.019	Pundamilia_nyererei
ENSACLG00000007675	zgc:153215	99	37.477	ENSPNAG00000025628	zgc:153215	99	37.477	Pygocentrus_nattereri
ENSACLG00000007675	zgc:153215	99	31.048	ENSSFOG00015001584	rbm12b	74	31.048	Scleropages_formosus
ENSACLG00000007675	zgc:153215	99	39.692	ENSSFOG00015009427	zgc:153215	99	39.692	Scleropages_formosus
ENSACLG00000007675	zgc:153215	100	54.913	ENSSMAG00000019013	zgc:153215	97	54.913	Scophthalmus_maximus
ENSACLG00000007675	zgc:153215	100	59.923	ENSSDUG00000012545	zgc:153215	99	59.923	Seriola_dumerili
ENSACLG00000007675	zgc:153215	100	54.966	ENSSLDG00000013581	zgc:153215	99	54.966	Seriola_lalandi_dorsalis
ENSACLG00000007675	zgc:153215	100	47.137	ENSSPAG00000023584	zgc:153215	98	47.328	Stegastes_partitus
ENSACLG00000007675	zgc:153215	81	50.856	ENSTNIG00000018374	-	99	50.856	Tetraodon_nigroviridis
ENSACLG00000007675	zgc:153215	99	50.000	ENSXCOG00000019654	zgc:153215	98	50.000	Xiphophorus_couchianus
ENSACLG00000007675	zgc:153215	100	39.448	ENSXMAG00000013169	-	98	39.448	Xiphophorus_maculatus