EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000007696 (Gene tree)
Gene ID: 113011179
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 11475 bases
Position: chr18:10178171-10189645
Accession: 113011179
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000011249	MMR_HSR1	PF01926.23	7.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000011529	-	4702	-	ENSACLP00000011249	243 (aa)	XP_026006379	UPI000329E4E8

Gene Model

Click here to download ENSACLG00000007696's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000007696's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000007696	rab12	84	38.426	ENSACLG00000007076	rab11bb	75	43.636
ENSACLG00000007696	rab12	78	37.696	ENSACLG00000026487	rab6bb	84	38.286
ENSACLG00000007696	rab12	77	37.895	ENSACLG00000018847	RAB7A	81	37.278
ENSACLG00000007696	rab12	84	38.426	ENSACLG00000005420	rab11ba	75	43.030
ENSACLG00000007696	rab12	63	38.608	ENSACLG00000008602	RAB29	95	38.608
ENSACLG00000007696	rab12	84	38.967	ENSACLG00000001775	rab11a	95	38.967
ENSACLG00000007696	rab12	69	38.674	ENSACLG00000005720	rab33ba	78	39.683
ENSACLG00000007696	rab12	72	49.143	ENSACLG00000007644	rab1ab	83	50.296
ENSACLG00000007696	rab12	71	51.744	ENSACLG00000019643	-	88	51.977
ENSACLG00000007696	rab12	77	45.455	ENSACLG00000023526	rab30	90	45.455
ENSACLG00000007696	rab12	71	40.462	ENSACLG00000006329	-	80	40.462
ENSACLG00000007696	rab12	71	38.372	ENSACLG00000008615	-	75	38.372
ENSACLG00000007696	rab12	68	43.452	ENSACLG00000027590	-	78	43.452
ENSACLG00000007696	rab12	68	37.278	ENSACLG00000024502	-	81	37.278
ENSACLG00000007696	rab12	84	39.320	ENSACLG00000018262	rab25a	96	37.379
ENSACLG00000007696	rab12	67	48.780	ENSACLG00000011484	rab18a	79	48.780
ENSACLG00000007696	rab12	62	31.788	ENSACLG00000027677	KRAS	84	31.481
ENSACLG00000007696	rab12	65	35.404	ENSACLG00000011249	rras	87	35.057
ENSACLG00000007696	rab12	68	42.515	ENSACLG00000009468	RAB39B	78	42.515
ENSACLG00000007696	rab12	69	42.515	ENSACLG00000018721	si:dkey-16l2.16	78	43.030
ENSACLG00000007696	rab12	68	37.059	ENSACLG00000021109	si:dkey-13a21.4	82	37.059
ENSACLG00000007696	rab12	67	35.119	ENSACLG00000004795	rab9b	75	35.119
ENSACLG00000007696	rab12	74	36.464	ENSACLG00000001218	RAB17	74	38.012
ENSACLG00000007696	rab12	68	30.000	ENSACLG00000019293	rasl11a	68	30.000
ENSACLG00000007696	rab12	85	36.321	ENSACLG00000013505	-	80	40.462
ENSACLG00000007696	rab12	74	39.665	ENSACLG00000018852	-	72	41.615
ENSACLG00000007696	rab12	64	31.210	ENSACLG00000007804	si:ch73-116o1.2	80	31.548
ENSACLG00000007696	rab12	83	34.826	ENSACLG00000018066	rab5aa	81	36.872
ENSACLG00000007696	rab12	67	33.929	ENSACLG00000003898	rab32b	77	33.929
ENSACLG00000007696	rab12	71	40.462	ENSACLG00000000860	-	77	40.462
ENSACLG00000007696	rab12	68	32.335	ENSACLG00000008646	rheb	89	32.335
ENSACLG00000007696	rab12	62	31.788	ENSACLG00000027515	KRAS	84	31.481
ENSACLG00000007696	rab12	67	31.902	ENSACLG00000025632	rabl2	71	31.902
ENSACLG00000007696	rab12	63	35.849	ENSACLG00000002819	rab23	74	33.889
ENSACLG00000007696	rab12	70	42.353	ENSACLG00000010251	rab25b	81	42.604
ENSACLG00000007696	rab12	78	46.561	ENSACLG00000003326	-	83	50.296
ENSACLG00000007696	rab12	60	38.562	ENSACLG00000010965	-	63	38.562
ENSACLG00000007696	rab12	65	35.220	ENSACLG00000021470	rab22a	81	35.220
ENSACLG00000007696	rab12	71	45.930	ENSACLG00000013734	-	81	45.930
ENSACLG00000007696	rab12	84	38.679	ENSACLG00000005446	-	75	43.636
ENSACLG00000007696	rab12	67	49.390	ENSACLG00000015289	rab18b	79	49.390
ENSACLG00000007696	rab12	68	35.882	ENSACLG00000024456	-	80	35.882
ENSACLG00000007696	rab12	68	43.452	ENSACLG00000022893	-	78	43.452
ENSACLG00000007696	rab12	85	40.094	ENSACLG00000001646	-	84	43.017
ENSACLG00000007696	rab12	65	39.623	ENSACLG00000019423	rab41	73	40.385
ENSACLG00000007696	rab12	70	49.112	ENSACLG00000013668	rab1ba	84	49.112
ENSACLG00000007696	rab12	67	35.119	ENSACLG00000006647	rab9a	83	35.119
ENSACLG00000007696	rab12	84	38.095	ENSACLG00000010268	rab11al	77	42.945
ENSACLG00000007696	rab12	70	45.029	ENSACLG00000026336	rab15	80	45.029
ENSACLG00000007696	rab12	79	32.487	ENSACLG00000005093	rab34a	61	36.585
ENSACLG00000007696	rab12	73	39.560	ENSACLG00000027006	zgc:101559	77	39.560
ENSACLG00000007696	rab12	65	40.252	ENSACLG00000025138	rab6ba	84	37.714
ENSACLG00000007696	rab12	83	37.736	ENSACLG00000007514	rab42a	79	41.860
ENSACLG00000007696	rab12	79	36.364	ENSACLG00000021547	rab33a	58	40.244
ENSACLG00000007696	rab12	65	35.000	ENSACLG00000005733	rab34b	60	35.000
ENSACLG00000007696	rab12	71	37.572	ENSACLG00000002706	rab5c	76	37.572

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000007696	rab12	100	80.894	ENSG00000206418	RAB12	91	87.892	Homo_sapiens
ENSACLG00000007696	rab12	89	78.082	ENSAMEG00000007452	RAB12	94	81.735	Ailuropoda_melanoleuca
ENSACLG00000007696	rab12	100	98.770	ENSACIG00000020616	rab12	100	98.770	Amphilophus_citrinellus
ENSACLG00000007696	rab12	100	98.354	ENSAOCG00000002130	rab12	100	98.354	Amphiprion_ocellaris
ENSACLG00000007696	rab12	100	98.354	ENSAPEG00000013255	rab12	100	98.354	Amphiprion_percula
ENSACLG00000007696	rab12	100	97.942	ENSATEG00000019683	rab12	100	97.942	Anabas_testudineus
ENSACLG00000007696	rab12	89	84.932	ENSACAG00000003360	RAB12	86	87.892	Anolis_carolinensis
ENSACLG00000007696	rab12	100	89.837	ENSAMXG00000004882	rab12	100	90.650	Astyanax_mexicanus
ENSACLG00000007696	rab12	93	85.022	ENSBTAG00000010356	RAB12	91	88.341	Bos_taurus
ENSACLG00000007696	rab12	93	84.513	ENSCJAG00000015468	RAB12	72	84.082	Callithrix_jacchus
ENSACLG00000007696	rab12	93	84.581	ENSCAFG00020023721	RAB12	84	84.146	Canis_lupus_dingo
ENSACLG00000007696	rab12	93	85.022	ENSCHIG00000016103	RAB12	91	88.341	Capra_hircus
ENSACLG00000007696	rab12	86	85.238	ENSCPOG00000022689	RAB12	100	89.524	Cavia_porcellus
ENSACLG00000007696	rab12	100	80.816	ENSCCAG00000022862	RAB12	100	84.082	Cebus_capucinus
ENSACLG00000007696	rab12	91	84.375	ENSCATG00000037784	RAB12	93	87.892	Cercocebus_atys
ENSACLG00000007696	rab12	84	88.780	ENSCSAG00000017569	RAB12	72	83.871	Chlorocebus_sabaeus
ENSACLG00000007696	rab12	93	83.700	ENSCPBG00000028375	RAB12	91	88.341	Chrysemys_picta_bellii
ENSACLG00000007696	rab12	89	84.475	ENSCANG00000031453	RAB12	99	88.128	Colobus_angolensis_palliatus
ENSACLG00000007696	rab12	93	84.141	ENSCGRG00001006958	Rab12	83	83.333	Cricetulus_griseus_chok1gshd
ENSACLG00000007696	rab12	100	97.942	ENSCSEG00000016933	rab12	100	97.942	Cynoglossus_semilaevis
ENSACLG00000007696	rab12	100	97.154	ENSCVAG00000003539	rab12	100	97.154	Cyprinodon_variegatus
ENSACLG00000007696	rab12	100	88.066	ENSDARG00000089428	rab12	94	94.091	Danio_rerio
ENSACLG00000007696	rab12	84	88.293	ENSDNOG00000046064	RAB12	51	87.444	Dasypus_novemcinctus
ENSACLG00000007696	rab12	92	83.260	ENSDORG00000008920	Rab12	98	87.892	Dipodomys_ordii
ENSACLG00000007696	rab12	78	66.138	ENSEBUG00000006581	rab12	89	67.582	Eptatretus_burgeri
ENSACLG00000007696	rab12	93	84.141	ENSEASG00005002926	RAB12	83	83.740	Equus_asinus_asinus
ENSACLG00000007696	rab12	93	84.141	ENSECAG00000007384	RAB12	71	83.740	Equus_caballus
ENSACLG00000007696	rab12	100	91.358	ENSELUG00000007123	rab12	100	89.300	Esox_lucius
ENSACLG00000007696	rab12	93	84.581	ENSFCAG00000027710	RAB12	72	84.146	Felis_catus
ENSACLG00000007696	rab12	100	97.143	ENSFHEG00000004319	rab12	100	97.143	Fundulus_heteroclitus
ENSACLG00000007696	rab12	86	92.823	ENSGMOG00000012335	rab12	87	91.388	Gadus_morhua
ENSACLG00000007696	rab12	93	83.772	ENSGALG00000033608	RAB12	89	87.892	Gallus_gallus
ENSACLG00000007696	rab12	97	87.712	ENSGACG00000016639	rab12	100	93.119	Gasterosteus_aculeatus
ENSACLG00000007696	rab12	93	83.260	ENSGAGG00000007278	RAB12	91	88.341	Gopherus_agassizii
ENSACLG00000007696	rab12	100	100.000	ENSHBUG00000008497	rab12	100	100.000	Haplochromis_burtoni
ENSACLG00000007696	rab12	97	79.747	ENSHGLG00000006189	RAB12	86	88.235	Heterocephalus_glaber_female
ENSACLG00000007696	rab12	100	91.770	ENSHCOG00000012376	rab12	100	91.770	Hippocampus_comes
ENSACLG00000007696	rab12	91	93.665	ENSIPUG00000017401	rab12	90	93.636	Ictalurus_punctatus
ENSACLG00000007696	rab12	92	82.667	ENSSTOG00000025122	RAB12	96	87.671	Ictidomys_tridecemlineatus
ENSACLG00000007696	rab12	91	84.375	ENSJJAG00000019064	Rab12	98	87.892	Jaculus_jaculus
ENSACLG00000007696	rab12	100	93.416	ENSKMAG00000020056	rab12	100	92.181	Kryptolebias_marmoratus
ENSACLG00000007696	rab12	100	97.531	ENSLBEG00000013756	rab12	100	97.531	Labrus_bergylta
ENSACLG00000007696	rab12	91	87.892	ENSLACG00000010461	RAB12	90	87.892	Latimeria_chalumnae
ENSACLG00000007696	rab12	100	83.871	ENSLOCG00000002680	rab12	100	87.903	Lepisosteus_oculatus
ENSACLG00000007696	rab12	100	81.301	ENSMFAG00000043551	RAB12	100	84.553	Macaca_fascicularis
ENSACLG00000007696	rab12	84	88.780	ENSMNEG00000040853	RAB12	88	87.892	Macaca_nemestrina
ENSACLG00000007696	rab12	100	97.942	ENSMAMG00000006862	rab12	100	97.942	Mastacembelus_armatus
ENSACLG00000007696	rab12	100	100.000	ENSMZEG00005024316	rab12	100	100.000	Maylandia_zebra
ENSACLG00000007696	rab12	83	84.804	ENSMGAG00000009197	RAB12	100	88.725	Meleagris_gallopavo
ENSACLG00000007696	rab12	93	84.141	ENSMAUG00000008371	Rab12	83	83.333	Mesocricetus_auratus
ENSACLG00000007696	rab12	91	83.929	ENSMICG00000030661	RAB12	93	87.444	Microcebus_murinus
ENSACLG00000007696	rab12	89	84.018	ENSMOCG00000000452	Rab12	100	87.671	Microtus_ochrogaster
ENSACLG00000007696	rab12	93	85.022	ENSMODG00000021452	RAB12	73	84.553	Monodelphis_domestica
ENSACLG00000007696	rab12	100	95.062	ENSMALG00000015762	rab12	100	93.827	Monopterus_albus
ENSACLG00000007696	rab12	93	85.022	MGP_CAROLIEiJ_G0021839	Rab12	84	84.146	Mus_caroli
ENSACLG00000007696	rab12	93	85.022	ENSMUSG00000023460	Rab12	100	84.146	Mus_musculus
ENSACLG00000007696	rab12	93	85.022	MGP_PahariEiJ_G0020826	Rab12	100	84.146	Mus_pahari
ENSACLG00000007696	rab12	93	85.022	MGP_SPRETEiJ_G0022750	Rab12	83	84.146	Mus_spretus
ENSACLG00000007696	rab12	100	80.488	ENSMLUG00000002883	RAB12	92	87.892	Myotis_lucifugus
ENSACLG00000007696	rab12	91	77.232	ENSNGAG00000019722	-	91	77.130	Nannospalax_galili
ENSACLG00000007696	rab12	95	81.545	ENSNGAG00000024103	-	95	87.444	Nannospalax_galili
ENSACLG00000007696	rab12	100	100.000	ENSNBRG00000014428	rab12	100	100.000	Neolamprologus_brichardi
ENSACLG00000007696	rab12	100	80.894	ENSNLEG00000006939	RAB12	91	87.892	Nomascus_leucogenys
ENSACLG00000007696	rab12	100	80.894	ENSMEUG00000000493	RAB12	100	84.146	Notamacropus_eugenii
ENSACLG00000007696	rab12	89	85.388	ENSODEG00000006414	RAB12	100	89.041	Octodon_degus
ENSACLG00000007696	rab12	100	99.588	ENSONIG00000018469	rab12	100	99.588	Oreochromis_niloticus
ENSACLG00000007696	rab12	100	97.942	ENSORLG00000003902	rab12	100	97.942	Oryzias_latipes
ENSACLG00000007696	rab12	100	97.531	ENSORLG00020005131	rab12	100	97.531	Oryzias_latipes_hni
ENSACLG00000007696	rab12	100	97.531	ENSORLG00015007869	rab12	100	97.531	Oryzias_latipes_hsok
ENSACLG00000007696	rab12	100	98.765	ENSOMEG00000008191	rab12	100	98.765	Oryzias_melastigma
ENSACLG00000007696	rab12	86	84.762	ENSOGAG00000028002	RAB12	99	88.571	Otolemur_garnettii
ENSACLG00000007696	rab12	79	89.529	ENSOARG00000000728	RAB12	88	87.442	Ovis_aries
ENSACLG00000007696	rab12	84	84.541	ENSPPAG00000009152	RAB12	97	88.835	Pan_paniscus
ENSACLG00000007696	rab12	100	80.894	ENSPPRG00000024521	RAB12	91	87.892	Panthera_pardus
ENSACLG00000007696	rab12	100	80.894	ENSPTRG00000009853	RAB12	91	87.892	Pan_troglodytes
ENSACLG00000007696	rab12	100	81.377	ENSPANG00000009320	RAB12	90	88.341	Papio_anubis
ENSACLG00000007696	rab12	100	89.344	ENSPKIG00000008579	rab12	100	89.754	Paramormyrops_kingsleyae
ENSACLG00000007696	rab12	100	89.712	ENSPMGG00000001890	rab12	100	90.947	Periophthalmus_magnuspinnatus
ENSACLG00000007696	rab12	93	84.581	ENSPEMG00000021032	Rab12	84	83.740	Peromyscus_maniculatus_bairdii
ENSACLG00000007696	rab12	93	84.581	ENSPCIG00000010453	RAB12	61	84.146	Phascolarctos_cinereus
ENSACLG00000007696	rab12	100	96.311	ENSPFOG00000001579	rab12	100	96.311	Poecilia_formosa
ENSACLG00000007696	rab12	100	96.311	ENSPLAG00000013594	rab12	100	96.311	Poecilia_latipinna
ENSACLG00000007696	rab12	100	96.311	ENSPMEG00000010417	rab12	100	96.311	Poecilia_mexicana
ENSACLG00000007696	rab12	100	96.721	ENSPREG00000017487	rab12	100	96.721	Poecilia_reticulata
ENSACLG00000007696	rab12	93	84.581	ENSPPYG00000009015	-	72	84.146	Pongo_abelii
ENSACLG00000007696	rab12	100	80.488	ENSPCAG00000015007	RAB12	100	83.740	Procavia_capensis
ENSACLG00000007696	rab12	100	80.894	ENSPCOG00000019816	RAB12	91	87.892	Propithecus_coquereli
ENSACLG00000007696	rab12	100	80.488	ENSPVAG00000002757	RAB12	91	87.444	Pteropus_vampyrus
ENSACLG00000007696	rab12	100	100.000	ENSPNYG00000023905	rab12	100	100.000	Pundamilia_nyererei
ENSACLG00000007696	rab12	100	100.000	ENSPNYG00000005654	rab12	100	100.000	Pundamilia_nyererei
ENSACLG00000007696	rab12	100	89.024	ENSPNAG00000015031	rab12	100	89.837	Pygocentrus_nattereri
ENSACLG00000007696	rab12	93	82.895	ENSRNOG00000019295	Rab12	91	82.456	Rattus_norvegicus
ENSACLG00000007696	rab12	91	84.375	ENSRBIG00000028760	RAB12	96	87.892	Rhinopithecus_bieti
ENSACLG00000007696	rab12	91	84.375	ENSRROG00000019249	RAB12	93	87.892	Rhinopithecus_roxellana
ENSACLG00000007696	rab12	94	79.654	ENSSBOG00000021125	RAB12	80	88.517	Saimiri_boliviensis_boliviensis
ENSACLG00000007696	rab12	93	84.071	ENSSHAG00000001489	RAB12	100	84.071	Sarcophilus_harrisii
ENSACLG00000007696	rab12	100	96.708	ENSSMAG00000012678	rab12	100	96.708	Scophthalmus_maximus
ENSACLG00000007696	rab12	100	98.765	ENSSDUG00000008505	rab12	100	98.765	Seriola_dumerili
ENSACLG00000007696	rab12	100	98.765	ENSSLDG00000022239	rab12	100	98.765	Seriola_lalandi_dorsalis
ENSACLG00000007696	rab12	100	81.301	ENSSPUG00000003222	RAB12	100	84.553	Sphenodon_punctatus
ENSACLG00000007696	rab12	100	98.765	ENSSPAG00000010822	rab12	100	98.765	Stegastes_partitus
ENSACLG00000007696	rab12	93	85.022	ENSSSCG00000038026	RAB12	91	88.789	Sus_scrofa
ENSACLG00000007696	rab12	86	88.517	ENSTGUG00000009889	RAB12	89	88.341	Taeniopygia_guttata
ENSACLG00000007696	rab12	100	93.827	ENSTRUG00000024455	rab12	100	92.593	Takifugu_rubripes
ENSACLG00000007696	rab12	100	94.650	ENSTNIG00000014859	rab12	100	93.416	Tetraodon_nigroviridis
ENSACLG00000007696	rab12	89	84.475	ENSTTRG00000008711	RAB12	99	88.128	Tursiops_truncatus
ENSACLG00000007696	rab12	100	80.894	ENSUAMG00000018092	RAB12	91	87.892	Ursus_americanus
ENSACLG00000007696	rab12	90	83.710	ENSVVUG00000011748	RAB12	99	87.330	Vulpes_vulpes
ENSACLG00000007696	rab12	86	89.151	ENSXETG00000004289	rab12	72	89.286	Xenopus_tropicalis
ENSACLG00000007696	rab12	100	94.672	ENSXCOG00000019310	rab12	100	95.082	Xiphophorus_couchianus
ENSACLG00000007696	rab12	100	95.902	ENSXMAG00000023617	rab12	100	95.902	Xiphophorus_maculatus