EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000007722 (Gene tree)
Gene ID: 113016067
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 1946 bases
Position: chr3:828852-830797
Accession: 113016067
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000011293	zf-CCHC	PF00098.23	5.9e-08	1	1
ENSACLP00000011293	RRM_5	PF13893.6	8.7e-08	1	1
ENSACLP00000011293	RRM_1	PF00076.22	9.5e-31	1	2
ENSACLP00000011293	RRM_1	PF00076.22	9.5e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000011574	-	1260	-	ENSACLP00000011293	419 (aa)	XP_026014367	UPI00032982BB

Gene Model

Click here to download ENSACLG00000007722's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000007722's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000007722	rbm4.1	99	47.002	ENSACLG00000007740	-	99	44.731
ENSACLG00000007722	rbm4.1	67	54.667	ENSACLG00000010642	rbm4.3	86	54.248
ENSACLG00000007722	rbm4.1	66	56.667	ENSACLG00000010620	-	94	50.829

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000007722	rbm4.1	100	90.736	ENSAPOG00000012353	rbm4.1	100	90.736	Acanthochromis_polyacanthus
ENSACLG00000007722	rbm4.1	100	97.375	ENSACIG00000016482	rbm4.1	100	97.375	Amphilophus_citrinellus
ENSACLG00000007722	rbm4.1	100	91.924	ENSAOCG00000010915	rbm4.1	100	91.924	Amphiprion_ocellaris
ENSACLG00000007722	rbm4.1	100	91.924	ENSAPEG00000009494	rbm4.1	100	91.924	Amphiprion_percula
ENSACLG00000007722	rbm4.1	100	90.736	ENSATEG00000001904	rbm4.1	100	90.736	Anabas_testudineus
ENSACLG00000007722	rbm4.1	100	59.242	ENSAMXG00000036611	rbm4.1	100	62.559	Astyanax_mexicanus
ENSACLG00000007722	rbm4.1	100	74.224	ENSCSEG00000014365	rbm4.1	100	74.224	Cynoglossus_semilaevis
ENSACLG00000007722	rbm4.1	99	48.936	ENSCSEG00000014359	-	97	48.086	Cynoglossus_semilaevis
ENSACLG00000007722	rbm4.1	100	78.385	ENSCVAG00000019349	rbm4.1	100	78.385	Cyprinodon_variegatus
ENSACLG00000007722	rbm4.1	100	51.415	ENSDARG00000055080	rbm4.2	100	51.878	Danio_rerio
ENSACLG00000007722	rbm4.1	100	70.213	ENSDARG00000036386	rbm4.1	100	69.740	Danio_rerio
ENSACLG00000007722	rbm4.1	100	65.802	ENSELUG00000013205	rbm4.1	100	63.761	Esox_lucius
ENSACLG00000007722	rbm4.1	100	79.147	ENSFHEG00000022926	rbm4.1	100	78.910	Fundulus_heteroclitus
ENSACLG00000007722	rbm4.1	100	67.371	ENSGMOG00000007464	rbm4.1	100	68.868	Gadus_morhua
ENSACLG00000007722	rbm4.1	92	51.276	ENSGMOG00000007455	-	96	49.640	Gadus_morhua
ENSACLG00000007722	rbm4.1	100	77.069	ENSGAFG00000019302	rbm4.1	100	76.596	Gambusia_affinis
ENSACLG00000007722	rbm4.1	97	49.034	ENSGACG00000000821	-	97	46.620	Gasterosteus_aculeatus
ENSACLG00000007722	rbm4.1	100	77.962	ENSGACG00000000822	rbm4.1	100	77.962	Gasterosteus_aculeatus
ENSACLG00000007722	rbm4.1	100	100.000	ENSHBUG00000011610	rbm4.1	100	100.000	Haplochromis_burtoni
ENSACLG00000007722	rbm4.1	96	71.253	ENSHCOG00000011403	rbm4.1	99	70.660	Hippocampus_comes
ENSACLG00000007722	rbm4.1	100	49.409	ENSIPUG00000022937	rbm4.2	100	48.956	Ictalurus_punctatus
ENSACLG00000007722	rbm4.1	100	62.615	ENSIPUG00000022931	rbm4.1	100	63.699	Ictalurus_punctatus
ENSACLG00000007722	rbm4.1	100	80.142	ENSKMAG00000006556	rbm4.1	100	80.142	Kryptolebias_marmoratus
ENSACLG00000007722	rbm4.1	99	48.700	ENSLBEG00000019756	-	90	60.897	Labrus_bergylta
ENSACLG00000007722	rbm4.1	100	84.561	ENSLBEG00000019782	rbm4.1	100	84.561	Labrus_bergylta
ENSACLG00000007722	rbm4.1	100	91.211	ENSMAMG00000001765	rbm4.1	100	91.211	Mastacembelus_armatus
ENSACLG00000007722	rbm4.1	98	50.355	ENSMAMG00000001760	-	98	48.571	Mastacembelus_armatus
ENSACLG00000007722	rbm4.1	100	100.000	ENSMZEG00005009205	rbm4.1	100	100.000	Maylandia_zebra
ENSACLG00000007722	rbm4.1	100	87.470	ENSMMOG00000020479	rbm4.1	100	86.761	Mola_mola
ENSACLG00000007722	rbm4.1	98	49.423	ENSMALG00000020557	-	98	48.936	Monopterus_albus
ENSACLG00000007722	rbm4.1	100	88.599	ENSMALG00000020544	rbm4.1	100	88.599	Monopterus_albus
ENSACLG00000007722	rbm4.1	100	99.761	ENSNBRG00000017755	rbm4.1	100	99.761	Neolamprologus_brichardi
ENSACLG00000007722	rbm4.1	100	99.523	ENSONIG00000015730	rbm4.1	100	99.523	Oreochromis_niloticus
ENSACLG00000007722	rbm4.1	100	78.860	ENSORLG00000012496	rbm4.1	100	78.860	Oryzias_latipes
ENSACLG00000007722	rbm4.1	100	78.860	ENSORLG00020012454	rbm4.1	100	78.860	Oryzias_latipes_hni
ENSACLG00000007722	rbm4.1	100	79.097	ENSORLG00015013678	rbm4.1	100	79.097	Oryzias_latipes_hsok
ENSACLG00000007722	rbm4.1	100	79.810	ENSOMEG00000001001	rbm4.1	100	79.810	Oryzias_melastigma
ENSACLG00000007722	rbm4.1	100	64.953	ENSPKIG00000020805	rbm4.1	85	79.710	Paramormyrops_kingsleyae
ENSACLG00000007722	rbm4.1	100	77.305	ENSPFOG00000012675	rbm4.1	100	76.832	Poecilia_formosa
ENSACLG00000007722	rbm4.1	99	47.837	ENSPFOG00000012685	-	99	45.902	Poecilia_formosa
ENSACLG00000007722	rbm4.1	100	77.305	ENSPLAG00000018572	rbm4.1	100	76.832	Poecilia_latipinna
ENSACLG00000007722	rbm4.1	100	77.305	ENSPMEG00000006290	rbm4.1	100	76.832	Poecilia_mexicana
ENSACLG00000007722	rbm4.1	100	77.305	ENSPREG00000003724	rbm4.1	100	76.832	Poecilia_reticulata
ENSACLG00000007722	rbm4.1	99	45.913	ENSPREG00000003764	-	87	65.761	Poecilia_reticulata
ENSACLG00000007722	rbm4.1	100	100.000	ENSPNYG00000004662	rbm4.1	100	100.000	Pundamilia_nyererei
ENSACLG00000007722	rbm4.1	100	51.163	ENSPNAG00000013057	rbm4.2	100	51.163	Pygocentrus_nattereri
ENSACLG00000007722	rbm4.1	100	68.000	ENSPNAG00000002539	rbm4.1	100	68.000	Pygocentrus_nattereri
ENSACLG00000007722	rbm4.1	100	64.720	ENSSFOG00015021996	sf1	100	64.019	Scleropages_formosus
ENSACLG00000007722	rbm4.1	100	85.036	ENSSMAG00000007571	rbm4.1	100	83.373	Scophthalmus_maximus
ENSACLG00000007722	rbm4.1	100	91.449	ENSSDUG00000003925	rbm4.1	100	91.449	Seriola_dumerili
ENSACLG00000007722	rbm4.1	97	51.675	ENSSDUG00000003936	-	99	49.292	Seriola_dumerili
ENSACLG00000007722	rbm4.1	100	91.449	ENSSLDG00000013147	rbm4.1	100	91.449	Seriola_lalandi_dorsalis
ENSACLG00000007722	rbm4.1	97	49.398	ENSSLDG00000013157	-	99	49.176	Seriola_lalandi_dorsalis
ENSACLG00000007722	rbm4.1	99	48.926	ENSSPAG00000019046	-	99	46.136	Stegastes_partitus
ENSACLG00000007722	rbm4.1	100	90.995	ENSSPAG00000019053	rbm4.1	100	92.891	Stegastes_partitus
ENSACLG00000007722	rbm4.1	99	48.317	ENSTRUG00000013328	-	99	46.244	Takifugu_rubripes
ENSACLG00000007722	rbm4.1	100	79.097	ENSTRUG00000013334	rbm4.1	100	78.147	Takifugu_rubripes
ENSACLG00000007722	rbm4.1	78	89.216	ENSTNIG00000004821	rbm4.1	97	92.268	Tetraodon_nigroviridis
ENSACLG00000007722	rbm4.1	100	77.305	ENSXCOG00000003731	rbm4.1	100	76.832	Xiphophorus_couchianus
ENSACLG00000007722	rbm4.1	99	67.391	ENSXMAG00000008059	-	86	67.391	Xiphophorus_maculatus
ENSACLG00000007722	rbm4.1	100	77.069	ENSXMAG00000008069	rbm4.1	100	76.596	Xiphophorus_maculatus