EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000007740 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: rbm4l|wu:fc25a01
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 1511 bases
Position: chr3:834318-835828
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000011299	zf-CCHC	PF00098.23	2.1e-05	1	1
ENSACLP00000011299	RRM_5	PF13893.6	6.6e-08	1	1
ENSACLP00000011299	RRM_1	PF00076.22	6.7e-30	1	2
ENSACLP00000011299	RRM_1	PF00076.22	6.7e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000011580	-	1160	-	ENSACLP00000011299	380 (aa)	-	-

Gene Model

Click here to download ENSACLG00000007740's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000007740's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000007740	-	99	49.669	ENSACLG00000010642	rbm4.3	96	37.789
ENSACLG00000007740	-	99	44.731	ENSACLG00000007722	rbm4.1	99	47.002

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000007740	-	94	45.209	ENSAPOG00000012353	rbm4.1	95	46.750	Acanthochromis_polyacanthus
ENSACLG00000007740	-	97	44.976	ENSACIG00000016482	rbm4.1	99	47.242	Amphilophus_citrinellus
ENSACLG00000007740	-	99	44.965	ENSAOCG00000010915	rbm4.1	99	46.429	Amphiprion_ocellaris
ENSACLG00000007740	-	99	44.965	ENSAPEG00000009494	rbm4.1	99	46.429	Amphiprion_percula
ENSACLG00000007740	-	99	44.471	ENSATEG00000001904	rbm4.1	99	46.062	Anabas_testudineus
ENSACLG00000007740	-	99	52.551	ENSAMXG00000036611	rbm4.1	99	52.062	Astyanax_mexicanus
ENSACLG00000007740	-	62	58.451	ENSAMXG00000032121	rbm4.2	89	58.451	Astyanax_mexicanus
ENSACLG00000007740	-	97	46.472	ENSCSEG00000014365	rbm4.1	99	46.472	Cynoglossus_semilaevis
ENSACLG00000007740	-	100	69.666	ENSCSEG00000014359	-	100	69.072	Cynoglossus_semilaevis
ENSACLG00000007740	-	94	45.409	ENSCVAG00000019349	rbm4.1	96	48.889	Cyprinodon_variegatus
ENSACLG00000007740	-	99	50.721	ENSDARG00000036386	rbm4.1	79	71.739	Danio_rerio
ENSACLG00000007740	-	99	49.123	ENSDARG00000055080	rbm4.2	99	50.258	Danio_rerio
ENSACLG00000007740	-	96	47.356	ENSELUG00000013205	rbm4.1	78	52.108	Esox_lucius
ENSACLG00000007740	-	94	46.734	ENSFHEG00000022926	rbm4.1	96	45.209	Fundulus_heteroclitus
ENSACLG00000007740	-	76	48.308	ENSGMOG00000007464	rbm4.1	77	49.387	Gadus_morhua
ENSACLG00000007740	-	100	61.697	ENSGMOG00000007455	-	100	64.359	Gadus_morhua
ENSACLG00000007740	-	94	49.377	ENSGAFG00000019302	rbm4.1	96	48.166	Gambusia_affinis
ENSACLG00000007740	-	100	72.251	ENSGACG00000000821	-	100	73.629	Gasterosteus_aculeatus
ENSACLG00000007740	-	94	49.046	ENSGACG00000000822	rbm4.1	96	48.387	Gasterosteus_aculeatus
ENSACLG00000007740	-	99	44.731	ENSHBUG00000011610	rbm4.1	99	47.002	Haplochromis_burtoni
ENSACLG00000007740	-	92	44.882	ENSHCOG00000011403	rbm4.1	80	48.276	Hippocampus_comes
ENSACLG00000007740	-	99	46.712	ENSIPUG00000022931	rbm4.1	99	46.172	Ictalurus_punctatus
ENSACLG00000007740	-	93	51.213	ENSIPUG00000022937	rbm4.2	97	49.871	Ictalurus_punctatus
ENSACLG00000007740	-	95	48.371	ENSKMAG00000006556	rbm4.1	96	48.267	Kryptolebias_marmoratus
ENSACLG00000007740	-	100	59.214	ENSKMAG00000006528	-	100	60.197	Kryptolebias_marmoratus
ENSACLG00000007740	-	99	44.495	ENSLBEG00000019782	rbm4.1	99	45.902	Labrus_bergylta
ENSACLG00000007740	-	100	72.135	ENSLBEG00000019756	-	100	73.316	Labrus_bergylta
ENSACLG00000007740	-	99	44.213	ENSMAMG00000001765	rbm4.1	99	45.991	Mastacembelus_armatus
ENSACLG00000007740	-	100	74.935	ENSMAMG00000001760	-	100	74.677	Mastacembelus_armatus
ENSACLG00000007740	-	99	44.731	ENSMZEG00005009205	rbm4.1	99	47.002	Maylandia_zebra
ENSACLG00000007740	-	54	97.585	ENSMZEG00005028158	-	69	97.585	Maylandia_zebra
ENSACLG00000007740	-	97	45.455	ENSMMOG00000020479	rbm4.1	97	45.215	Mola_mola
ENSACLG00000007740	-	100	77.083	ENSMALG00000020557	-	100	77.865	Monopterus_albus
ENSACLG00000007740	-	99	46.620	ENSMALG00000020544	rbm4.1	99	47.630	Monopterus_albus
ENSACLG00000007740	-	99	44.731	ENSNBRG00000017755	rbm4.1	99	47.002	Neolamprologus_brichardi
ENSACLG00000007740	-	99	44.731	ENSONIG00000015730	rbm4.1	99	47.002	Oreochromis_niloticus
ENSACLG00000007740	-	100	47.031	ENSORLG00000012496	rbm4.1	100	47.981	Oryzias_latipes
ENSACLG00000007740	-	100	47.031	ENSORLG00020012454	rbm4.1	100	47.981	Oryzias_latipes_hni
ENSACLG00000007740	-	99	46.890	ENSORLG00015013678	rbm4.1	99	47.847	Oryzias_latipes_hsok
ENSACLG00000007740	-	99	46.905	ENSOMEG00000001001	rbm4.1	99	46.890	Oryzias_melastigma
ENSACLG00000007740	-	99	45.735	ENSPKIG00000020805	rbm4.1	85	69.565	Paramormyrops_kingsleyae
ENSACLG00000007740	-	94	49.624	ENSPFOG00000012675	rbm4.1	96	48.166	Poecilia_formosa
ENSACLG00000007740	-	100	64.872	ENSPFOG00000012685	-	100	64.872	Poecilia_formosa
ENSACLG00000007740	-	94	49.377	ENSPLAG00000018572	rbm4.1	96	48.166	Poecilia_latipinna
ENSACLG00000007740	-	94	49.377	ENSPMEG00000006290	rbm4.1	96	48.166	Poecilia_mexicana
ENSACLG00000007740	-	100	62.532	ENSPREG00000003764	-	100	62.016	Poecilia_reticulata
ENSACLG00000007740	-	94	49.377	ENSPREG00000003724	rbm4.1	96	48.166	Poecilia_reticulata
ENSACLG00000007740	-	99	44.731	ENSPNYG00000004662	rbm4.1	99	47.002	Pundamilia_nyererei
ENSACLG00000007740	-	96	50.611	ENSPNAG00000002539	rbm4.1	96	50.000	Pygocentrus_nattereri
ENSACLG00000007740	-	97	50.521	ENSPNAG00000013057	rbm4.2	97	49.347	Pygocentrus_nattereri
ENSACLG00000007740	-	99	48.694	ENSSFOG00015021996	sf1	99	46.905	Scleropages_formosus
ENSACLG00000007740	-	99	46.283	ENSSMAG00000007571	rbm4.1	99	44.604	Scophthalmus_maximus
ENSACLG00000007740	-	99	43.852	ENSSDUG00000003925	rbm4.1	99	46.905	Seriola_dumerili
ENSACLG00000007740	-	100	77.261	ENSSDUG00000003936	-	100	78.036	Seriola_dumerili
ENSACLG00000007740	-	99	43.852	ENSSLDG00000013147	rbm4.1	99	46.905	Seriola_lalandi_dorsalis
ENSACLG00000007740	-	100	73.902	ENSSLDG00000013157	-	100	76.486	Seriola_lalandi_dorsalis
ENSACLG00000007740	-	99	44.213	ENSSPAG00000019053	rbm4.1	99	47.156	Stegastes_partitus
ENSACLG00000007740	-	100	76.302	ENSSPAG00000019046	-	100	76.042	Stegastes_partitus
ENSACLG00000007740	-	100	68.490	ENSTRUG00000013328	-	100	68.490	Takifugu_rubripes
ENSACLG00000007740	-	97	45.107	ENSTRUG00000013334	rbm4.1	97	44.844	Takifugu_rubripes
ENSACLG00000007740	-	100	67.708	ENSTNIG00000000316	-	100	67.708	Tetraodon_nigroviridis
ENSACLG00000007740	-	99	44.330	ENSTNIG00000004821	rbm4.1	99	43.782	Tetraodon_nigroviridis
ENSACLG00000007740	-	53	58.937	ENSXETG00000026649	rbm4b	94	43.716	Xenopus_tropicalis
ENSACLG00000007740	-	94	49.377	ENSXCOG00000003731	rbm4.1	96	48.166	Xiphophorus_couchianus
ENSACLG00000007740	-	94	49.377	ENSXMAG00000008069	rbm4.1	96	48.166	Xiphophorus_maculatus
ENSACLG00000007740	-	100	64.524	ENSXMAG00000008059	-	100	64.781	Xiphophorus_maculatus