EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000007752 (Gene tree)
Gene ID: 113030919
Gene Symbol: msi2a
Alias: cb746|fi47b09|msi2|wu:fb02d08|wu:fi32d12|wu:fi47b09
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 267449 bases
Position: chr10:8598911-8866359
Accession: 113030919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000011389	RRM_1	PF00076.22	3.7e-33	1	2
ENSACLP00000011389	RRM_1	PF00076.22	3.7e-33	2	2
ENSACLP00000011364	RRM_1	PF00076.22	5e-33	1	2
ENSACLP00000011364	RRM_1	PF00076.22	5e-33	2	2
ENSACLP00000011353	RRM_1	PF00076.22	8.1e-33	1	2
ENSACLP00000011353	RRM_1	PF00076.22	8.1e-33	2	2
ENSACLP00000011416	RRM_1	PF00076.22	7.4e-29	1	2
ENSACLP00000011416	RRM_1	PF00076.22	7.4e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000011701	-	942	-	ENSACLP00000011416	313 (aa)	-	-
ENSACLT00000011674	-	1179	-	ENSACLP00000011389	307 (aa)	-	UPI0003EC62C7
ENSACLT00000011636	-	1479	XM_026182713	ENSACLP00000011353	407 (aa)	XP_026038498	UPI0003299AE3
ENSACLT00000011648	-	1299	XM_026182722	ENSACLP00000011364	347 (aa)	XP_026038507	UPI000329DF87

Gene Model

Click here to download ENSACLG00000007752's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000007752's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000007752	msi2a	61	46.809	ENSACLG00000025213	hnrnpd	74	42.500
ENSACLG00000007752	msi2a	55	37.791	ENSACLG00000008978	-	87	38.547
ENSACLG00000007752	msi2a	55	30.588	ENSACLG00000008973	HNRNPA0	90	30.000
ENSACLG00000007752	msi2a	57	41.860	ENSACLG00000006940	-	73	37.037
ENSACLG00000007752	msi2a	57	50.000	ENSACLG00000007827	hnrnpaba	67	48.705
ENSACLG00000007752	msi2a	100	67.429	ENSACLG00000000117	-	97	72.908
ENSACLG00000007752	msi2a	100	66.382	ENSACLG00000011230	MSI1	97	70.438
ENSACLG00000007752	msi2a	55	49.102	ENSACLG00000026497	hnrnpd	88	45.333
ENSACLG00000007752	msi2a	78	41.176	ENSACLG00000023187	dazap1	53	41.176
ENSACLG00000007752	msi2a	62	47.179	ENSACLG00000024583	-	80	45.540
ENSACLG00000007752	msi2a	57	50.000	ENSACLG00000007958	hnrnpaba	56	48.705
ENSACLG00000007752	msi2a	59	41.304	ENSACLG00000008532	hnrnpa3	93	36.782

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000007752	msi2a	100	87.805	ENSG00000153944	MSI2	97	92.829	Homo_sapiens
ENSACLG00000007752	msi2a	100	99.588	ENSAPOG00000001658	msi2a	100	99.588	Acanthochromis_polyacanthus
ENSACLG00000007752	msi2a	98	84.049	ENSAMEG00000002697	MSI2	99	88.344	Ailuropoda_melanoleuca
ENSACLG00000007752	msi2a	99	100.000	ENSACIG00000009475	msi2a	100	90.511	Amphilophus_citrinellus
ENSACLG00000007752	msi2a	56	91.111	ENSAOCG00000014822	msi2a	69	91.111	Amphiprion_ocellaris
ENSACLG00000007752	msi2a	100	99.424	ENSAPEG00000007706	msi2a	100	99.424	Amphiprion_percula
ENSACLG00000007752	msi2a	100	99.588	ENSATEG00000010498	msi2a	100	99.588	Anabas_testudineus
ENSACLG00000007752	msi2a	93	92.446	ENSATEG00000003301	-	100	92.446	Anabas_testudineus
ENSACLG00000007752	msi2a	93	92.473	ENSACAG00000005452	MSI2	88	75.603	Anolis_carolinensis
ENSACLG00000007752	msi2a	100	87.805	ENSANAG00000037827	MSI2	97	92.829	Aotus_nancymaae
ENSACLG00000007752	msi2a	100	95.885	ENSAMXG00000010474	msi2b	100	93.930	Astyanax_mexicanus
ENSACLG00000007752	msi2a	100	95.885	ENSAMXG00000032796	msi2a	97	96.016	Astyanax_mexicanus
ENSACLG00000007752	msi2a	98	88.636	ENSBTAG00000004406	MSI2	94	93.913	Bos_taurus
ENSACLG00000007752	msi2a	76	59.919	WBGene00003423	msi-1	73	62.069	Caenorhabditis_elegans
ENSACLG00000007752	msi2a	100	87.805	ENSCJAG00000013998	MSI2	97	92.829	Callithrix_jacchus
ENSACLG00000007752	msi2a	94	87.261	ENSCAFG00020025620	MSI2	81	86.875	Canis_lupus_dingo
ENSACLG00000007752	msi2a	100	86.890	ENSCHIG00000016580	MSI2	97	91.235	Capra_hircus
ENSACLG00000007752	msi2a	93	87.943	ENSCPOG00000034042	MSI2	99	87.943	Cavia_porcellus
ENSACLG00000007752	msi2a	100	87.805	ENSCCAG00000033927	MSI2	97	92.829	Cebus_capucinus
ENSACLG00000007752	msi2a	93	92.000	ENSCATG00000040879	MSI2	97	92.430	Cercocebus_atys
ENSACLG00000007752	msi2a	100	87.464	ENSCLAG00000014325	MSI2	100	87.896	Chinchilla_lanigera
ENSACLG00000007752	msi2a	100	87.805	ENSCSAG00000005633	MSI2	97	92.829	Chlorocebus_sabaeus
ENSACLG00000007752	msi2a	71	88.000	ENSCHOG00000008660	MSI2	83	86.275	Choloepus_hoffmanni
ENSACLG00000007752	msi2a	100	87.692	ENSCPBG00000009942	MSI2	89	93.923	Chrysemys_picta_bellii
ENSACLG00000007752	msi2a	87	53.659	ENSCING00000018579	-	90	53.110	Ciona_intestinalis
ENSACLG00000007752	msi2a	87	54.000	ENSCSAVG00000010397	-	95	57.143	Ciona_savignyi
ENSACLG00000007752	msi2a	93	92.000	ENSCANG00000036414	MSI2	100	88.308	Colobus_angolensis_palliatus
ENSACLG00000007752	msi2a	100	87.234	ENSCGRG00001013330	Msi2	97	92.430	Cricetulus_griseus_chok1gshd
ENSACLG00000007752	msi2a	98	83.792	ENSCGRG00000003141	Msi2	100	88.073	Cricetulus_griseus_crigri
ENSACLG00000007752	msi2a	81	80.412	ENSCSEG00000013557	msi2a	79	92.308	Cynoglossus_semilaevis
ENSACLG00000007752	msi2a	100	80.556	ENSCSEG00000003266	-	100	80.556	Cynoglossus_semilaevis
ENSACLG00000007752	msi2a	61	77.596	ENSCSEG00000013549	msi2a	100	77.596	Cynoglossus_semilaevis
ENSACLG00000007752	msi2a	100	99.588	ENSCVAG00000017075	msi2a	100	99.135	Cyprinodon_variegatus
ENSACLG00000007752	msi2a	100	96.708	ENSDARG00000032614	msi2b	100	97.030	Danio_rerio
ENSACLG00000007752	msi2a	100	93.846	ENSDARG00000033901	msi2a	100	84.275	Danio_rerio
ENSACLG00000007752	msi2a	93	92.708	ENSDNOG00000014501	MSI2	100	92.708	Dasypus_novemcinctus
ENSACLG00000007752	msi2a	55	96.460	ENSDORG00000028440	-	100	96.460	Dipodomys_ordii
ENSACLG00000007752	msi2a	81	81.218	ENSDORG00000005394	Msi2	79	89.231	Dipodomys_ordii
ENSACLG00000007752	msi2a	95	56.410	FBgn0260943	Rbp6	90	64.626	Drosophila_melanogaster
ENSACLG00000007752	msi2a	72	71.711	ENSETEG00000012450	-	64	71.711	Echinops_telfairi
ENSACLG00000007752	msi2a	93	63.898	ENSEBUG00000006732	msi2a	75	79.524	Eptatretus_burgeri
ENSACLG00000007752	msi2a	93	89.967	ENSEASG00005002965	MSI2	97	79.830	Equus_asinus_asinus
ENSACLG00000007752	msi2a	100	85.237	ENSECAG00000011435	MSI2	100	85.634	Equus_caballus
ENSACLG00000007752	msi2a	86	77.381	ENSEEUG00000007810	MSI2	100	77.075	Erinaceus_europaeus
ENSACLG00000007752	msi2a	100	95.492	ENSELUG00000001361	msi2b	100	88.060	Esox_lucius
ENSACLG00000007752	msi2a	100	94.888	ENSELUG00000011747	msi2a	100	94.888	Esox_lucius
ENSACLG00000007752	msi2a	51	75.000	ENSFCAG00000033787	-	82	75.000	Felis_catus
ENSACLG00000007752	msi2a	100	87.805	ENSFCAG00000041686	MSI2	97	92.829	Felis_catus
ENSACLG00000007752	msi2a	97	85.047	ENSFDAG00000016118	MSI2	100	88.344	Fukomys_damarensis
ENSACLG00000007752	msi2a	100	99.588	ENSFHEG00000000084	msi2a	100	99.509	Fundulus_heteroclitus
ENSACLG00000007752	msi2a	59	97.115	ENSGMOG00000007596	-	100	97.115	Gadus_morhua
ENSACLG00000007752	msi2a	100	86.610	ENSGALG00000005567	MSI2	100	87.032	Gallus_gallus
ENSACLG00000007752	msi2a	96	90.492	ENSGAFG00000006974	msi2a	90	100.000	Gambusia_affinis
ENSACLG00000007752	msi2a	100	88.525	ENSGAGG00000016542	MSI2	100	84.918	Gopherus_agassizii
ENSACLG00000007752	msi2a	93	92.000	ENSGGOG00000013182	MSI2	100	88.308	Gorilla_gorilla
ENSACLG00000007752	msi2a	100	100.000	ENSHBUG00000020800	msi2a	100	100.000	Haplochromis_burtoni
ENSACLG00000007752	msi2a	100	78.632	ENSHGLG00000012444	MSI2	100	78.963	Heterocephalus_glaber_female
ENSACLG00000007752	msi2a	55	96.491	ENSHGLG00100004028	-	87	96.491	Heterocephalus_glaber_male
ENSACLG00000007752	msi2a	78	83.575	ENSHGLG00100003744	MSI2	100	84.135	Heterocephalus_glaber_male
ENSACLG00000007752	msi2a	95	82.031	ENSHCOG00000017241	-	98	71.571	Hippocampus_comes
ENSACLG00000007752	msi2a	100	99.177	ENSHCOG00000000266	msi2a	100	98.280	Hippocampus_comes
ENSACLG00000007752	msi2a	100	95.885	ENSIPUG00000003732	msi2b	100	89.776	Ictalurus_punctatus
ENSACLG00000007752	msi2a	100	94.650	ENSIPUG00000021097	msi2a	100	94.650	Ictalurus_punctatus
ENSACLG00000007752	msi2a	93	87.943	ENSSTOG00000007884	MSI2	99	87.943	Ictidomys_tridecemlineatus
ENSACLG00000007752	msi2a	78	78.392	ENSJJAG00000006292	-	100	77.889	Jaculus_jaculus
ENSACLG00000007752	msi2a	55	96.460	ENSJJAG00000009467	-	100	96.460	Jaculus_jaculus
ENSACLG00000007752	msi2a	100	99.177	ENSKMAG00000009494	msi2a	100	94.349	Kryptolebias_marmoratus
ENSACLG00000007752	msi2a	100	99.588	ENSLBEG00000007061	msi2a	100	99.509	Labrus_bergylta
ENSACLG00000007752	msi2a	93	86.010	ENSLBEG00000026223	-	100	86.010	Labrus_bergylta
ENSACLG00000007752	msi2a	55	92.941	ENSLACG00000016798	MSI2	98	92.308	Latimeria_chalumnae
ENSACLG00000007752	msi2a	100	96.708	ENSLOCG00000004675	msi2b	100	88.206	Lepisosteus_oculatus
ENSACLG00000007752	msi2a	93	92.000	ENSMFAG00000003775	MSI2	100	88.308	Macaca_fascicularis
ENSACLG00000007752	msi2a	93	92.000	ENSMMUG00000002069	MSI2	100	88.308	Macaca_mulatta
ENSACLG00000007752	msi2a	100	87.805	ENSMNEG00000045275	MSI2	97	92.829	Macaca_nemestrina
ENSACLG00000007752	msi2a	93	92.000	ENSMLEG00000033888	MSI2	100	88.308	Mandrillus_leucophaeus
ENSACLG00000007752	msi2a	100	99.349	ENSMAMG00000010503	msi2a	100	99.588	Mastacembelus_armatus
ENSACLG00000007752	msi2a	100	94.239	ENSMAMG00000002488	-	99	94.040	Mastacembelus_armatus
ENSACLG00000007752	msi2a	100	100.000	ENSMZEG00005007676	msi2a	100	100.000	Maylandia_zebra
ENSACLG00000007752	msi2a	100	86.932	ENSMAUG00000003862	Msi2	100	87.356	Mesocricetus_auratus
ENSACLG00000007752	msi2a	100	87.805	ENSMICG00000013598	-	97	92.829	Microcebus_murinus
ENSACLG00000007752	msi2a	100	70.977	ENSMICG00000032913	-	96	79.710	Microcebus_murinus
ENSACLG00000007752	msi2a	100	87.179	ENSMOCG00000005820	Msi2	100	87.608	Microtus_ochrogaster
ENSACLG00000007752	msi2a	96	93.416	ENSMMOG00000008348	msi2a	90	100.000	Mola_mola
ENSACLG00000007752	msi2a	78	83.092	ENSMODG00000014790	MSI2	100	83.654	Monodelphis_domestica
ENSACLG00000007752	msi2a	100	99.712	ENSMALG00000000071	msi2a	100	99.712	Monopterus_albus
ENSACLG00000007752	msi2a	100	87.500	MGP_CAROLIEiJ_G0016948	Msi2	100	96.460	Mus_caroli
ENSACLG00000007752	msi2a	100	87.500	ENSMUSG00000069769	Msi2	100	96.460	Mus_musculus
ENSACLG00000007752	msi2a	100	87.500	MGP_PahariEiJ_G0018079	Msi2	100	96.460	Mus_pahari
ENSACLG00000007752	msi2a	100	87.500	MGP_SPRETEiJ_G0017795	Msi2	100	96.460	Mus_spretus
ENSACLG00000007752	msi2a	98	88.961	ENSMPUG00000015377	MSI2	94	93.913	Mustela_putorius_furo
ENSACLG00000007752	msi2a	98	88.961	ENSMLUG00000007865	MSI2	94	93.478	Myotis_lucifugus
ENSACLG00000007752	msi2a	100	87.179	ENSNGAG00000017807	Msi2	100	87.608	Nannospalax_galili
ENSACLG00000007752	msi2a	100	100.000	ENSNBRG00000014596	msi2a	100	100.000	Neolamprologus_brichardi
ENSACLG00000007752	msi2a	93	92.000	ENSNLEG00000008059	MSI2	96	92.417	Nomascus_leucogenys
ENSACLG00000007752	msi2a	72	82.895	ENSOPRG00000000872	-	64	82.895	Ochotona_princeps
ENSACLG00000007752	msi2a	100	87.464	ENSODEG00000011974	MSI2	100	87.896	Octodon_degus
ENSACLG00000007752	msi2a	62	100.000	ENSONIG00000001972	msi2a	84	100.000	Oreochromis_niloticus
ENSACLG00000007752	msi2a	97	91.880	ENSOANG00000005667	MSI2	99	78.723	Ornithorhynchus_anatinus
ENSACLG00000007752	msi2a	98	88.961	ENSOCUG00000010440	MSI2	94	93.913	Oryctolagus_cuniculus
ENSACLG00000007752	msi2a	100	99.588	ENSORLG00000009671	msi2a	100	97.125	Oryzias_latipes
ENSACLG00000007752	msi2a	100	99.754	ENSORLG00020021556	msi2a	100	99.754	Oryzias_latipes_hni
ENSACLG00000007752	msi2a	100	99.588	ENSORLG00015004592	msi2a	100	97.125	Oryzias_latipes_hsok
ENSACLG00000007752	msi2a	100	99.674	ENSOMEG00000000146	msi2a	100	99.674	Oryzias_melastigma
ENSACLG00000007752	msi2a	98	85.390	ENSOGAG00000005621	MSI2	97	89.130	Otolemur_garnettii
ENSACLG00000007752	msi2a	97	85.047	ENSPPAG00000037697	MSI2	100	88.308	Pan_paniscus
ENSACLG00000007752	msi2a	97	90.099	ENSPPRG00000001848	MSI2	91	93.913	Panthera_pardus
ENSACLG00000007752	msi2a	94	87.342	ENSPTIG00000021678	MSI2	96	87.821	Panthera_tigris_altaica
ENSACLG00000007752	msi2a	78	74.895	ENSPTIG00000021873	-	91	74.895	Panthera_tigris_altaica
ENSACLG00000007752	msi2a	93	92.000	ENSPTRG00000009437	MSI2	100	88.308	Pan_troglodytes
ENSACLG00000007752	msi2a	100	87.805	ENSPANG00000022319	MSI2	97	92.829	Papio_anubis
ENSACLG00000007752	msi2a	95	89.761	ENSPKIG00000007038	-	96	92.593	Paramormyrops_kingsleyae
ENSACLG00000007752	msi2a	52	95.604	ENSPKIG00000017107	-	81	95.604	Paramormyrops_kingsleyae
ENSACLG00000007752	msi2a	100	94.650	ENSPSIG00000008618	MSI2	100	80.941	Pelodiscus_sinensis
ENSACLG00000007752	msi2a	100	98.722	ENSPMGG00000005888	msi2a	100	98.722	Periophthalmus_magnuspinnatus
ENSACLG00000007752	msi2a	55	96.460	ENSPEMG00000021793	-	100	96.460	Peromyscus_maniculatus_bairdii
ENSACLG00000007752	msi2a	100	85.794	ENSPCIG00000006063	MSI2	100	86.197	Phascolarctos_cinereus
ENSACLG00000007752	msi2a	61	99.048	ENSPFOG00000019337	MSI2	92	99.048	Poecilia_formosa
ENSACLG00000007752	msi2a	62	100.000	ENSPLAG00000000436	msi2a	72	100.000	Poecilia_latipinna
ENSACLG00000007752	msi2a	56	100.000	ENSPMEG00000013247	msi2a	75	100.000	Poecilia_mexicana
ENSACLG00000007752	msi2a	100	99.588	ENSPREG00000000881	msi2a	100	99.263	Poecilia_reticulata
ENSACLG00000007752	msi2a	93	89.496	ENSPPYG00000008244	-	100	89.496	Pongo_abelii
ENSACLG00000007752	msi2a	90	63.866	ENSPCAG00000010552	MSI2	95	89.231	Procavia_capensis
ENSACLG00000007752	msi2a	55	95.420	ENSPCOG00000019195	-	93	95.420	Propithecus_coquereli
ENSACLG00000007752	msi2a	93	84.932	ENSPVAG00000017053	MSI2	99	84.932	Pteropus_vampyrus
ENSACLG00000007752	msi2a	100	100.000	ENSPNYG00000018393	msi2a	100	100.000	Pundamilia_nyererei
ENSACLG00000007752	msi2a	100	95.885	ENSPNAG00000000844	msi2b	100	93.631	Pygocentrus_nattereri
ENSACLG00000007752	msi2a	100	95.473	ENSPNAG00000014957	msi2a	100	93.949	Pygocentrus_nattereri
ENSACLG00000007752	msi2a	93	92.446	ENSRNOG00000025338	Msi2	100	92.446	Rattus_norvegicus
ENSACLG00000007752	msi2a	51	73.626	ENSRBIG00000032064	-	84	88.158	Rhinopithecus_bieti
ENSACLG00000007752	msi2a	55	96.491	ENSRROG00000034421	-	92	96.491	Rhinopithecus_roxellana
ENSACLG00000007752	msi2a	93	92.411	ENSSBOG00000026425	MSI2	100	88.308	Saimiri_boliviensis_boliviensis
ENSACLG00000007752	msi2a	97	85.047	ENSSHAG00000008672	MSI2	100	88.308	Sarcophilus_harrisii
ENSACLG00000007752	msi2a	100	83.265	ENSSFOG00015012168	msi2b	100	68.531	Scleropages_formosus
ENSACLG00000007752	msi2a	97	86.799	ENSSFOG00015021687	-	97	92.793	Scleropages_formosus
ENSACLG00000007752	msi2a	100	99.754	ENSSMAG00000018484	msi2a	100	99.754	Scophthalmus_maximus
ENSACLG00000007752	msi2a	100	99.588	ENSSDUG00000014507	msi2a	100	99.588	Seriola_dumerili
ENSACLG00000007752	msi2a	100	84.179	ENSSDUG00000021968	-	99	94.040	Seriola_dumerili
ENSACLG00000007752	msi2a	100	99.588	ENSSLDG00000017172	msi2a	100	99.509	Seriola_lalandi_dorsalis
ENSACLG00000007752	msi2a	62	92.405	ENSSPUG00000000913	-	94	92.405	Sphenodon_punctatus
ENSACLG00000007752	msi2a	100	99.588	ENSSPAG00000017793	msi2a	100	99.509	Stegastes_partitus
ENSACLG00000007752	msi2a	96	91.837	ENSSSCG00000038505	MSI2	97	92.829	Sus_scrofa
ENSACLG00000007752	msi2a	78	83.575	ENSTGUG00000008452	MSI2	100	84.135	Taeniopygia_guttata
ENSACLG00000007752	msi2a	97	98.477	ENSTRUG00000021248	msi2a	95	98.477	Takifugu_rubripes
ENSACLG00000007752	msi2a	79	77.273	ENSTBEG00000001241	MSI2	73	77.273	Tupaia_belangeri
ENSACLG00000007752	msi2a	93	84.034	ENSTTRG00000002189	MSI2	91	94.079	Tursiops_truncatus
ENSACLG00000007752	msi2a	98	88.961	ENSUAMG00000000700	MSI2	96	94.144	Ursus_americanus
ENSACLG00000007752	msi2a	89	91.803	ENSUMAG00000000505	MSI2	95	93.264	Ursus_maritimus
ENSACLG00000007752	msi2a	59	81.868	ENSVPAG00000006837	-	62	81.868	Vicugna_pacos
ENSACLG00000007752	msi2a	100	87.464	ENSVVUG00000011783	MSI2	98	91.964	Vulpes_vulpes
ENSACLG00000007752	msi2a	99	98.438	ENSXCOG00000006113	msi2a	100	93.612	Xiphophorus_couchianus
ENSACLG00000007752	msi2a	100	99.588	ENSXMAG00000000608	msi2a	100	99.509	Xiphophorus_maculatus