EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000007826 (Gene tree)
Gene ID: 113032093
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 14255 bases
Position: chr11:19519691-19533945
Accession: ZDB-GENE-060810-50
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000011449	ResIII	PF04851.15	4.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000011734	-	2580	-	ENSACLP00000011449	859 (aa)	-	-

Gene Model

Click here to download ENSACLG00000007826's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000007826's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000007826	rad54b	58	32.485	ENSACLG00000019304	chd1l	50	31.953
ENSACLG00000007826	rad54b	62	30.369	ENSACLG00000015088	ercc6l2	57	30.034
ENSACLG00000007826	rad54b	70	46.290	ENSACLG00000018711	rad54l	86	45.659
ENSACLG00000007826	rad54b	56	31.721	ENSACLG00000017063	smarcad1a	50	31.502

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000007826	rad54b	99	53.989	ENSG00000197275	RAD54B	99	53.989	Homo_sapiens
ENSACLG00000007826	rad54b	84	57.866	ENSG00000265817	FSBP	99	57.866	Homo_sapiens
ENSACLG00000007826	rad54b	99	54.148	ENSAMEG00000005834	-	99	54.148	Ailuropoda_melanoleuca
ENSACLG00000007826	rad54b	100	89.647	ENSACIG00000013005	rad54b	100	89.534	Amphilophus_citrinellus
ENSACLG00000007826	rad54b	100	80.541	ENSAOCG00000008523	rad54b	100	80.541	Amphiprion_ocellaris
ENSACLG00000007826	rad54b	100	80.204	ENSAPEG00000001673	rad54b	100	80.543	Amphiprion_percula
ENSACLG00000007826	rad54b	100	85.040	ENSATEG00000001527	rad54b	100	85.040	Anabas_testudineus
ENSACLG00000007826	rad54b	99	57.345	ENSAPLG00000014366	-	99	57.345	Anas_platyrhynchos
ENSACLG00000007826	rad54b	91	60.025	ENSACAG00000003671	-	98	60.025	Anolis_carolinensis
ENSACLG00000007826	rad54b	75	59.969	ENSANAG00000019528	-	99	59.969	Aotus_nancymaae
ENSACLG00000007826	rad54b	91	69.476	ENSAMXG00000039985	rad54b	97	67.445	Astyanax_mexicanus
ENSACLG00000007826	rad54b	92	59.975	ENSBTAG00000000632	RAD54B	86	59.975	Bos_taurus
ENSACLG00000007826	rad54b	83	35.984	WBGene00013792	Y116A8C.13	82	36.119	Caenorhabditis_elegans
ENSACLG00000007826	rad54b	99	54.317	ENSCJAG00000000080	-	99	58.082	Callithrix_jacchus
ENSACLG00000007826	rad54b	99	55.338	ENSCAFG00000009179	RAD54B	99	55.338	Canis_familiaris
ENSACLG00000007826	rad54b	99	55.338	ENSCAFG00020012084	-	99	55.338	Canis_lupus_dingo
ENSACLG00000007826	rad54b	92	60.101	ENSCHIG00000008230	-	86	60.101	Capra_hircus
ENSACLG00000007826	rad54b	92	59.521	ENSTSYG00000013234	-	99	54.645	Carlito_syrichta
ENSACLG00000007826	rad54b	99	55.788	ENSCPOG00000011643	-	99	55.899	Cavia_porcellus
ENSACLG00000007826	rad54b	99	54.555	ENSCCAG00000011754	-	99	57.995	Cebus_capucinus
ENSACLG00000007826	rad54b	99	54.655	ENSCATG00000030661	-	99	58.711	Cercocebus_atys
ENSACLG00000007826	rad54b	99	55.978	ENSCLAG00000010476	-	99	56.040	Chinchilla_lanigera
ENSACLG00000007826	rad54b	99	54.655	ENSCSAG00000012712	-	99	54.655	Chlorocebus_sabaeus
ENSACLG00000007826	rad54b	92	62.893	ENSCPBG00000003204	-	86	62.893	Chrysemys_picta_bellii
ENSACLG00000007826	rad54b	92	59.418	ENSCANG00000017939	-	99	58.848	Colobus_angolensis_palliatus
ENSACLG00000007826	rad54b	99	54.994	ENSCGRG00001020184	Rad54b	99	55.068	Cricetulus_griseus_chok1gshd
ENSACLG00000007826	rad54b	99	53.795	ENSCGRG00000016752	Rad54b	99	53.863	Cricetulus_griseus_crigri
ENSACLG00000007826	rad54b	99	80.863	ENSCSEG00000001601	rad54b	99	80.863	Cynoglossus_semilaevis
ENSACLG00000007826	rad54b	100	81.342	ENSCVAG00000009200	rad54b	100	81.342	Cyprinodon_variegatus
ENSACLG00000007826	rad54b	99	64.672	ENSDARG00000092134	rad54b	99	69.688	Danio_rerio
ENSACLG00000007826	rad54b	99	54.754	ENSDNOG00000015535	-	99	54.754	Dasypus_novemcinctus
ENSACLG00000007826	rad54b	99	55.518	ENSDORG00000002492	Rad54b	99	55.531	Dipodomys_ordii
ENSACLG00000007826	rad54b	86	56.384	ENSETEG00000010605	-	100	56.384	Echinops_telfairi
ENSACLG00000007826	rad54b	92	50.730	ENSEBUG00000009104	rad54b	86	50.918	Eptatretus_burgeri
ENSACLG00000007826	rad54b	92	59.497	ENSEASG00005004021	-	89	59.497	Equus_asinus_asinus
ENSACLG00000007826	rad54b	99	54.526	ENSECAG00000021949	-	99	54.526	Equus_caballus
ENSACLG00000007826	rad54b	76	53.125	ENSEEUG00000008056	-	72	53.750	Erinaceus_europaeus
ENSACLG00000007826	rad54b	98	79.267	ENSELUG00000009287	rad54b	90	79.267	Esox_lucius
ENSACLG00000007826	rad54b	92	59.698	ENSFCAG00000015513	-	99	59.290	Felis_catus
ENSACLG00000007826	rad54b	99	56.678	ENSFALG00000005467	-	99	56.678	Ficedula_albicollis
ENSACLG00000007826	rad54b	99	55.229	ENSFDAG00000020541	-	100	55.229	Fukomys_damarensis
ENSACLG00000007826	rad54b	93	82.609	ENSFHEG00000014382	rad54b	89	82.609	Fundulus_heteroclitus
ENSACLG00000007826	rad54b	91	81.818	ENSGMOG00000014774	rad54b	99	81.818	Gadus_morhua
ENSACLG00000007826	rad54b	99	56.710	ENSGALG00000043597	RAD54B	99	56.710	Gallus_gallus
ENSACLG00000007826	rad54b	99	85.112	ENSGAFG00000007901	rad54b	99	83.702	Gambusia_affinis
ENSACLG00000007826	rad54b	99	79.389	ENSGACG00000009128	rad54b	99	79.171	Gasterosteus_aculeatus
ENSACLG00000007826	rad54b	99	57.421	ENSGAGG00000018747	-	99	57.421	Gopherus_agassizii
ENSACLG00000007826	rad54b	99	54.158	ENSGGOG00000023516	-	99	54.158	Gorilla_gorilla
ENSACLG00000007826	rad54b	99	100.000	ENSHBUG00000016017	rad54b	91	100.000	Haplochromis_burtoni
ENSACLG00000007826	rad54b	99	54.338	ENSHGLG00000008263	RAD54B	99	54.447	Heterocephalus_glaber_female
ENSACLG00000007826	rad54b	99	53.664	ENSHGLG00100008108	-	99	53.772	Heterocephalus_glaber_male
ENSACLG00000007826	rad54b	99	74.078	ENSHCOG00000004764	rad54b	98	76.617	Hippocampus_comes
ENSACLG00000007826	rad54b	91	68.805	ENSIPUG00000018531	rad54b	83	68.805	Ictalurus_punctatus
ENSACLG00000007826	rad54b	99	53.914	ENSSTOG00000010791	-	99	53.914	Ictidomys_tridecemlineatus
ENSACLG00000007826	rad54b	99	53.980	ENSJJAG00000010314	Rad54b	99	53.980	Jaculus_jaculus
ENSACLG00000007826	rad54b	100	80.442	ENSKMAG00000004744	rad54b	100	80.349	Kryptolebias_marmoratus
ENSACLG00000007826	rad54b	86	64.000	ENSLACG00000000859	-	100	63.867	Latimeria_chalumnae
ENSACLG00000007826	rad54b	92	69.039	ENSLOCG00000010100	rad54b	94	69.327	Lepisosteus_oculatus
ENSACLG00000007826	rad54b	92	57.377	ENSLAFG00000015315	-	97	57.377	Loxodonta_africana
ENSACLG00000007826	rad54b	99	54.655	ENSMFAG00000031629	-	99	58.711	Macaca_fascicularis
ENSACLG00000007826	rad54b	99	54.655	ENSMMUG00000005659	-	99	54.655	Macaca_mulatta
ENSACLG00000007826	rad54b	99	54.386	ENSMNEG00000016408	-	99	54.386	Macaca_nemestrina
ENSACLG00000007826	rad54b	92	59.166	ENSMLEG00000006946	-	86	59.166	Mandrillus_leucophaeus
ENSACLG00000007826	rad54b	100	82.406	ENSMAMG00000012269	rad54b	99	82.406	Mastacembelus_armatus
ENSACLG00000007826	rad54b	99	99.379	ENSMZEG00005005281	rad54b	96	99.750	Maylandia_zebra
ENSACLG00000007826	rad54b	99	56.352	ENSMGAG00000012024	-	99	56.291	Meleagris_gallopavo
ENSACLG00000007826	rad54b	99	54.994	ENSMAUG00000013586	Rad54b	99	55.068	Mesocricetus_auratus
ENSACLG00000007826	rad54b	99	56.050	ENSMICG00000000754	-	99	56.050	Microcebus_murinus
ENSACLG00000007826	rad54b	99	55.084	ENSMOCG00000020035	Rad54b	99	54.972	Microtus_ochrogaster
ENSACLG00000007826	rad54b	99	81.385	ENSMMOG00000003394	rad54b	99	81.385	Mola_mola
ENSACLG00000007826	rad54b	91	58.890	ENSMODG00000007343	-	97	58.764	Monodelphis_domestica
ENSACLG00000007826	rad54b	74	87.011	ENSMALG00000001520	rad54b	100	87.011	Monopterus_albus
ENSACLG00000007826	rad54b	99	55.866	MGP_CAROLIEiJ_G0025810	Rad54b	99	55.543	Mus_caroli
ENSACLG00000007826	rad54b	99	55.150	ENSMUSG00000078773	Rad54b	99	55.260	Mus_musculus
ENSACLG00000007826	rad54b	99	55.729	MGP_PahariEiJ_G0023933	Rad54b	99	55.840	Mus_pahari
ENSACLG00000007826	rad54b	99	55.592	MGP_SPRETEiJ_G0026758	Rad54b	99	55.592	Mus_spretus
ENSACLG00000007826	rad54b	92	59.142	ENSMPUG00000008878	-	97	59.446	Mustela_putorius_furo
ENSACLG00000007826	rad54b	99	54.575	ENSMLUG00000008953	-	99	54.575	Myotis_lucifugus
ENSACLG00000007826	rad54b	99	54.465	ENSNGAG00000017537	Rad54b	99	54.355	Nannospalax_galili
ENSACLG00000007826	rad54b	100	98.952	ENSNBRG00000013394	rad54b	100	98.952	Neolamprologus_brichardi
ENSACLG00000007826	rad54b	99	54.039	ENSNLEG00000003062	-	99	57.787	Nomascus_leucogenys
ENSACLG00000007826	rad54b	74	61.381	ENSMEUG00000012426	-	69	61.381	Notamacropus_eugenii
ENSACLG00000007826	rad54b	84	75.000	ENSODEG00000002650	-	93	73.913	Octodon_degus
ENSACLG00000007826	rad54b	99	55.336	ENSODEG00000019564	-	99	55.336	Octodon_degus
ENSACLG00000007826	rad54b	99	97.143	ENSONIG00000006067	rad54b	100	90.909	Oreochromis_niloticus
ENSACLG00000007826	rad54b	87	59.631	ENSOANG00000011348	-	99	59.631	Ornithorhynchus_anatinus
ENSACLG00000007826	rad54b	99	54.585	ENSOCUG00000016478	-	99	54.585	Oryctolagus_cuniculus
ENSACLG00000007826	rad54b	99	85.786	ENSORLG00000008918	rad54b	100	87.597	Oryzias_latipes
ENSACLG00000007826	rad54b	74	87.442	ENSORLG00020012171	rad54b	100	87.132	Oryzias_latipes_hni
ENSACLG00000007826	rad54b	99	85.056	ENSORLG00015018536	rad54b	91	85.056	Oryzias_latipes_hsok
ENSACLG00000007826	rad54b	90	86.346	ENSOMEG00000004345	rad54b	100	86.346	Oryzias_melastigma
ENSACLG00000007826	rad54b	99	53.493	ENSOGAG00000007854	-	99	53.493	Otolemur_garnettii
ENSACLG00000007826	rad54b	92	60.000	ENSOARG00000007691	-	97	60.000	Ovis_aries
ENSACLG00000007826	rad54b	99	53.057	ENSPPAG00000029572	-	99	53.057	Pan_paniscus
ENSACLG00000007826	rad54b	92	59.572	ENSPPRG00000007571	-	99	59.153	Panthera_pardus
ENSACLG00000007826	rad54b	84	59.290	ENSPTIG00000012670	-	99	59.290	Panthera_tigris_altaica
ENSACLG00000007826	rad54b	99	54.148	ENSPTRG00000020427	-	99	58.060	Pan_troglodytes
ENSACLG00000007826	rad54b	99	54.655	ENSPANG00000019566	-	99	54.655	Papio_anubis
ENSACLG00000007826	rad54b	99	63.991	ENSPKIG00000014974	rad54b	99	63.991	Paramormyrops_kingsleyae
ENSACLG00000007826	rad54b	92	61.384	ENSPSIG00000002383	-	96	61.384	Pelodiscus_sinensis
ENSACLG00000007826	rad54b	99	55.011	ENSPEMG00000012133	Rad54b	99	55.011	Peromyscus_maniculatus_bairdii
ENSACLG00000007826	rad54b	91	58.987	ENSPMAG00000002916	rad54b	98	58.608	Petromyzon_marinus
ENSACLG00000007826	rad54b	92	58.890	ENSPCIG00000020151	-	92	58.786	Phascolarctos_cinereus
ENSACLG00000007826	rad54b	97	86.709	ENSPFOG00000023411	rad54b	90	86.709	Poecilia_formosa
ENSACLG00000007826	rad54b	97	86.582	ENSPLAG00000010430	rad54b	90	86.582	Poecilia_latipinna
ENSACLG00000007826	rad54b	99	85.732	ENSPMEG00000016873	rad54b	99	81.776	Poecilia_mexicana
ENSACLG00000007826	rad54b	99	85.732	ENSPREG00000018443	rad54b	99	82.755	Poecilia_reticulata
ENSACLG00000007826	rad54b	99	54.476	ENSPPYG00000018750	-	99	54.476	Pongo_abelii
ENSACLG00000007826	rad54b	99	55.120	ENSPCOG00000026845	-	99	58.550	Propithecus_coquereli
ENSACLG00000007826	rad54b	86	57.810	ENSPVAG00000000261	-	86	57.810	Pteropus_vampyrus
ENSACLG00000007826	rad54b	93	95.734	ENSPNYG00000018303	rad54b	97	95.734	Pundamilia_nyererei
ENSACLG00000007826	rad54b	99	65.744	ENSPNAG00000000295	rad54b	99	65.167	Pygocentrus_nattereri
ENSACLG00000007826	rad54b	99	55.556	ENSRNOG00000039949	Rad54b	99	55.556	Rattus_norvegicus
ENSACLG00000007826	rad54b	92	58.913	ENSRBIG00000020419	-	86	58.913	Rhinopithecus_bieti
ENSACLG00000007826	rad54b	92	58.913	ENSRROG00000039897	-	86	58.913	Rhinopithecus_roxellana
ENSACLG00000007826	rad54b	90	35.571	YBR073W	RDH54	85	35.882	Saccharomyces_cerevisiae
ENSACLG00000007826	rad54b	99	54.645	ENSSBOG00000028501	-	99	54.645	Saimiri_boliviensis_boliviensis
ENSACLG00000007826	rad54b	91	59.899	ENSSHAG00000017038	-	86	59.899	Sarcophilus_harrisii
ENSACLG00000007826	rad54b	66	71.781	ENSSFOG00015008483	rad54b	89	71.781	Scleropages_formosus
ENSACLG00000007826	rad54b	97	87.374	ENSSMAG00000018659	rad54b	99	83.702	Scophthalmus_maximus
ENSACLG00000007826	rad54b	97	85.468	ENSSDUG00000001122	rad54b	91	85.468	Seriola_dumerili
ENSACLG00000007826	rad54b	100	85.629	ENSSLDG00000013787	rad54b	100	82.326	Seriola_lalandi_dorsalis
ENSACLG00000007826	rad54b	99	57.960	ENSSPUG00000016497	-	99	57.960	Sphenodon_punctatus
ENSACLG00000007826	rad54b	100	86.152	ENSSPAG00000012800	rad54b	100	86.152	Stegastes_partitus
ENSACLG00000007826	rad54b	99	54.545	ENSSSCG00000006101	-	98	59.217	Sus_scrofa
ENSACLG00000007826	rad54b	99	57.174	ENSTGUG00000011880	-	99	57.174	Taeniopygia_guttata
ENSACLG00000007826	rad54b	93	84.060	ENSTRUG00000010015	rad54b	90	84.060	Takifugu_rubripes
ENSACLG00000007826	rad54b	92	54.924	ENSTTRG00000006312	-	86	55.051	Tursiops_truncatus
ENSACLG00000007826	rad54b	92	59.824	ENSUMAG00000016401	-	99	54.417	Ursus_maritimus
ENSACLG00000007826	rad54b	92	59.899	ENSVPAG00000003157	-	87	59.899	Vicugna_pacos
ENSACLG00000007826	rad54b	99	48.661	ENSXETG00000025924	rad54b	98	52.830	Xenopus_tropicalis
ENSACLG00000007826	rad54b	99	82.771	ENSXMAG00000013141	rad54b	99	82.771	Xiphophorus_maculatus