EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000007907 (Gene tree)
Gene ID: 113021011
Gene Symbol: si:ch211-11k18.4
Alias: -
Full Name: uncharacterized LOC113021011
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 9966 bases
Position: chr4:20300216-20310181
Accession: 113021011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000011573	MMR_HSR1	PF01926.23	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000011858	-	5791	-	ENSACLP00000011573	451 (aa)	XP_026021168	UPI00032A3558

Gene Model

Click here to download ENSACLG00000007907's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000007907's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000007907	si:ch211-11k18.4	99	59.735	ENSACLG00000001308	si:dkey-98f17.5	100	59.735

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000007907	si:ch211-11k18.4	100	92.018	ENSAPOG00000018833	si:ch211-11k18.4	100	92.018	Acanthochromis_polyacanthus
ENSACLG00000007907	si:ch211-11k18.4	99	59.292	ENSAPOG00000010378	si:dkey-98f17.5	100	59.292	Acanthochromis_polyacanthus
ENSACLG00000007907	si:ch211-11k18.4	99	59.292	ENSACIG00000017719	si:dkey-98f17.5	100	59.292	Amphilophus_citrinellus
ENSACLG00000007907	si:ch211-11k18.4	99	91.796	ENSACIG00000006696	si:ch211-11k18.4	100	91.796	Amphilophus_citrinellus
ENSACLG00000007907	si:ch211-11k18.4	100	92.018	ENSAOCG00000014284	si:ch211-11k18.4	100	92.018	Amphiprion_ocellaris
ENSACLG00000007907	si:ch211-11k18.4	99	59.513	ENSAOCG00000008661	si:dkey-98f17.5	100	59.513	Amphiprion_ocellaris
ENSACLG00000007907	si:ch211-11k18.4	99	59.513	ENSAPEG00000022447	si:dkey-98f17.5	100	59.513	Amphiprion_percula
ENSACLG00000007907	si:ch211-11k18.4	100	91.796	ENSAPEG00000014910	si:ch211-11k18.4	100	91.796	Amphiprion_percula
ENSACLG00000007907	si:ch211-11k18.4	100	90.022	ENSATEG00000004775	si:ch211-11k18.4	100	90.022	Anabas_testudineus
ENSACLG00000007907	si:ch211-11k18.4	99	59.513	ENSATEG00000007188	si:dkey-98f17.5	100	59.513	Anabas_testudineus
ENSACLG00000007907	si:ch211-11k18.4	98	65.247	ENSACAG00000028632	-	98	65.247	Anolis_carolinensis
ENSACLG00000007907	si:ch211-11k18.4	99	59.867	ENSAMXG00000001190	si:dkey-98f17.5	100	59.867	Astyanax_mexicanus
ENSACLG00000007907	si:ch211-11k18.4	99	82.183	ENSAMXG00000017817	si:ch211-11k18.4	99	82.183	Astyanax_mexicanus
ENSACLG00000007907	si:ch211-11k18.4	83	62.334	ENSCING00000020807	-	99	62.334	Ciona_intestinalis
ENSACLG00000007907	si:ch211-11k18.4	99	59.778	ENSCSAVG00000009987	-	100	59.778	Ciona_savignyi
ENSACLG00000007907	si:ch211-11k18.4	100	85.809	ENSCSEG00000017661	si:ch211-11k18.4	100	85.588	Cynoglossus_semilaevis
ENSACLG00000007907	si:ch211-11k18.4	99	59.292	ENSCSEG00000017512	si:dkey-98f17.5	95	60.732	Cynoglossus_semilaevis
ENSACLG00000007907	si:ch211-11k18.4	99	59.292	ENSCVAG00000011351	si:dkey-98f17.5	100	59.292	Cyprinodon_variegatus
ENSACLG00000007907	si:ch211-11k18.4	100	89.135	ENSCVAG00000015346	si:ch211-11k18.4	100	89.135	Cyprinodon_variegatus
ENSACLG00000007907	si:ch211-11k18.4	98	60.449	ENSDARG00000068863	si:dkey-98f17.5	100	60.449	Danio_rerio
ENSACLG00000007907	si:ch211-11k18.4	99	83.964	ENSDARG00000087869	si:ch211-11k18.4	100	90.306	Danio_rerio
ENSACLG00000007907	si:ch211-11k18.4	82	57.995	ENSEBUG00000007620	si:dkey-98f17.5	99	57.995	Eptatretus_burgeri
ENSACLG00000007907	si:ch211-11k18.4	99	59.202	ENSELUG00000003365	si:dkey-98f17.5	100	59.202	Esox_lucius
ENSACLG00000007907	si:ch211-11k18.4	99	59.071	ENSFHEG00000012744	si:dkey-98f17.5	100	59.071	Fundulus_heteroclitus
ENSACLG00000007907	si:ch211-11k18.4	100	88.027	ENSFHEG00000019820	si:ch211-11k18.4	100	88.027	Fundulus_heteroclitus
ENSACLG00000007907	si:ch211-11k18.4	90	77.970	ENSGMOG00000003492	si:ch211-11k18.4	100	77.970	Gadus_morhua
ENSACLG00000007907	si:ch211-11k18.4	99	58.850	ENSGAFG00000012362	si:dkey-98f17.5	89	58.850	Gambusia_affinis
ENSACLG00000007907	si:ch211-11k18.4	100	86.253	ENSGAFG00000005677	si:ch211-11k18.4	100	86.253	Gambusia_affinis
ENSACLG00000007907	si:ch211-11k18.4	90	90.594	ENSGACG00000013134	si:ch211-11k18.4	100	90.594	Gasterosteus_aculeatus
ENSACLG00000007907	si:ch211-11k18.4	58	73.664	ENSGACG00000009399	si:dkey-98f17.5	100	73.664	Gasterosteus_aculeatus
ENSACLG00000007907	si:ch211-11k18.4	100	99.778	ENSHBUG00000020638	si:ch211-11k18.4	100	99.778	Haplochromis_burtoni
ENSACLG00000007907	si:ch211-11k18.4	99	59.956	ENSHBUG00000008331	si:dkey-98f17.5	100	59.956	Haplochromis_burtoni
ENSACLG00000007907	si:ch211-11k18.4	99	56.696	ENSHCOG00000016505	si:dkey-98f17.5	98	56.696	Hippocampus_comes
ENSACLG00000007907	si:ch211-11k18.4	99	87.973	ENSHCOG00000014773	si:ch211-11k18.4	99	87.973	Hippocampus_comes
ENSACLG00000007907	si:ch211-11k18.4	99	59.300	ENSIPUG00000019981	si:dkey-98f17.5	99	58.351	Ictalurus_punctatus
ENSACLG00000007907	si:ch211-11k18.4	90	68.069	ENSIPUG00000016694	si:ch211-11k18.4	84	70.157	Ictalurus_punctatus
ENSACLG00000007907	si:ch211-11k18.4	96	78.704	ENSIPUG00000016678	si:ch211-11k18.4	99	78.704	Ictalurus_punctatus
ENSACLG00000007907	si:ch211-11k18.4	99	58.407	ENSKMAG00000014997	si:dkey-98f17.5	100	58.186	Kryptolebias_marmoratus
ENSACLG00000007907	si:ch211-11k18.4	99	89.978	ENSKMAG00000009327	si:ch211-11k18.4	99	89.978	Kryptolebias_marmoratus
ENSACLG00000007907	si:ch211-11k18.4	99	59.071	ENSLBEG00000012756	si:dkey-98f17.5	100	59.071	Labrus_bergylta
ENSACLG00000007907	si:ch211-11k18.4	99	70.667	ENSLACG00000006280	si:ch211-11k18.4	99	70.667	Latimeria_chalumnae
ENSACLG00000007907	si:ch211-11k18.4	99	63.029	ENSLACG00000004899	-	99	63.029	Latimeria_chalumnae
ENSACLG00000007907	si:ch211-11k18.4	98	58.916	ENSLACG00000017433	si:dkey-98f17.5	97	58.916	Latimeria_chalumnae
ENSACLG00000007907	si:ch211-11k18.4	99	59.071	ENSLOCG00000003824	si:dkey-98f17.5	99	59.071	Lepisosteus_oculatus
ENSACLG00000007907	si:ch211-11k18.4	96	91.204	ENSMAMG00000002536	si:ch211-11k18.4	99	91.204	Mastacembelus_armatus
ENSACLG00000007907	si:ch211-11k18.4	99	59.513	ENSMAMG00000014528	si:dkey-98f17.5	100	59.513	Mastacembelus_armatus
ENSACLG00000007907	si:ch211-11k18.4	99	59.956	ENSMZEG00005016572	si:dkey-98f17.5	100	59.956	Maylandia_zebra
ENSACLG00000007907	si:ch211-11k18.4	100	99.778	ENSMZEG00005008941	si:ch211-11k18.4	100	99.778	Maylandia_zebra
ENSACLG00000007907	si:ch211-11k18.4	100	84.035	ENSMMOG00000012485	si:ch211-11k18.4	100	84.035	Mola_mola
ENSACLG00000007907	si:ch211-11k18.4	98	60.181	ENSMALG00000012761	si:dkey-98f17.5	100	60.633	Monopterus_albus
ENSACLG00000007907	si:ch211-11k18.4	100	88.248	ENSMALG00000019735	si:ch211-11k18.4	100	88.248	Monopterus_albus
ENSACLG00000007907	si:ch211-11k18.4	99	59.867	ENSNBRG00000006068	si:dkey-98f17.5	100	59.867	Neolamprologus_brichardi
ENSACLG00000007907	si:ch211-11k18.4	96	98.380	ENSNBRG00000002220	si:ch211-11k18.4	98	98.380	Neolamprologus_brichardi
ENSACLG00000007907	si:ch211-11k18.4	100	96.674	ENSONIG00000019412	si:ch211-11k18.4	100	96.674	Oreochromis_niloticus
ENSACLG00000007907	si:ch211-11k18.4	99	60.177	ENSONIG00000013568	si:dkey-98f17.5	100	60.177	Oreochromis_niloticus
ENSACLG00000007907	si:ch211-11k18.4	100	87.361	ENSORLG00000012015	si:ch211-11k18.4	100	87.361	Oryzias_latipes
ENSACLG00000007907	si:ch211-11k18.4	91	59.756	ENSORLG00000007958	si:dkey-98f17.5	95	59.756	Oryzias_latipes
ENSACLG00000007907	si:ch211-11k18.4	100	87.140	ENSORLG00020012386	si:ch211-11k18.4	100	87.140	Oryzias_latipes_hni
ENSACLG00000007907	si:ch211-11k18.4	99	58.407	ENSORLG00020013350	si:dkey-98f17.5	100	58.407	Oryzias_latipes_hni
ENSACLG00000007907	si:ch211-11k18.4	100	87.583	ENSORLG00015022862	si:ch211-11k18.4	100	87.583	Oryzias_latipes_hsok
ENSACLG00000007907	si:ch211-11k18.4	99	58.407	ENSORLG00015002000	si:dkey-98f17.5	100	58.407	Oryzias_latipes_hsok
ENSACLG00000007907	si:ch211-11k18.4	99	58.186	ENSOMEG00000003154	si:dkey-98f17.5	100	58.219	Oryzias_melastigma
ENSACLG00000007907	si:ch211-11k18.4	100	88.248	ENSOMEG00000018686	si:ch211-11k18.4	100	88.248	Oryzias_melastigma
ENSACLG00000007907	si:ch211-11k18.4	99	76.837	ENSPKIG00000023918	-	98	76.837	Paramormyrops_kingsleyae
ENSACLG00000007907	si:ch211-11k18.4	99	81.069	ENSPKIG00000018807	si:ch211-11k18.4	99	81.069	Paramormyrops_kingsleyae
ENSACLG00000007907	si:ch211-11k18.4	99	60.089	ENSPKIG00000024621	si:dkey-98f17.5	100	60.089	Paramormyrops_kingsleyae
ENSACLG00000007907	si:ch211-11k18.4	99	59.071	ENSPMGG00000019065	si:dkey-98f17.5	100	59.071	Periophthalmus_magnuspinnatus
ENSACLG00000007907	si:ch211-11k18.4	100	87.140	ENSPMGG00000016507	si:ch211-11k18.4	100	87.140	Periophthalmus_magnuspinnatus
ENSACLG00000007907	si:ch211-11k18.4	100	87.805	ENSPFOG00000007976	si:ch211-11k18.4	100	87.805	Poecilia_formosa
ENSACLG00000007907	si:ch211-11k18.4	99	58.681	ENSPFOG00000015142	si:dkey-98f17.5	100	58.681	Poecilia_formosa
ENSACLG00000007907	si:ch211-11k18.4	100	87.805	ENSPLAG00000019794	si:ch211-11k18.4	100	87.805	Poecilia_latipinna
ENSACLG00000007907	si:ch211-11k18.4	99	58.850	ENSPLAG00000003709	si:dkey-98f17.5	100	58.850	Poecilia_latipinna
ENSACLG00000007907	si:ch211-11k18.4	99	58.850	ENSPMEG00000018709	si:dkey-98f17.5	94	58.850	Poecilia_mexicana
ENSACLG00000007907	si:ch211-11k18.4	100	87.583	ENSPMEG00000024198	si:ch211-11k18.4	100	87.583	Poecilia_mexicana
ENSACLG00000007907	si:ch211-11k18.4	93	83.059	ENSPREG00000015319	si:ch211-11k18.4	97	83.059	Poecilia_reticulata
ENSACLG00000007907	si:ch211-11k18.4	98	59.050	ENSPREG00000000708	si:dkey-98f17.5	100	59.050	Poecilia_reticulata
ENSACLG00000007907	si:ch211-11k18.4	100	99.557	ENSPNYG00000017099	si:ch211-11k18.4	100	99.557	Pundamilia_nyererei
ENSACLG00000007907	si:ch211-11k18.4	99	59.956	ENSPNYG00000017266	si:dkey-98f17.5	100	59.956	Pundamilia_nyererei
ENSACLG00000007907	si:ch211-11k18.4	99	82.628	ENSPNAG00000022138	si:ch211-11k18.4	99	82.628	Pygocentrus_nattereri
ENSACLG00000007907	si:ch211-11k18.4	99	59.956	ENSPNAG00000021352	si:dkey-98f17.5	100	59.956	Pygocentrus_nattereri
ENSACLG00000007907	si:ch211-11k18.4	99	77.778	ENSSFOG00015000985	si:ch211-11k18.4	95	77.778	Scleropages_formosus
ENSACLG00000007907	si:ch211-11k18.4	99	57.871	ENSSFOG00015017965	si:dkey-98f17.5	100	57.871	Scleropages_formosus
ENSACLG00000007907	si:ch211-11k18.4	100	89.800	ENSSMAG00000009651	si:ch211-11k18.4	100	89.800	Scophthalmus_maximus
ENSACLG00000007907	si:ch211-11k18.4	99	59.202	ENSSMAG00000011905	si:dkey-98f17.5	100	59.202	Scophthalmus_maximus
ENSACLG00000007907	si:ch211-11k18.4	98	58.837	ENSSDUG00000013457	si:dkey-98f17.5	99	58.837	Seriola_dumerili
ENSACLG00000007907	si:ch211-11k18.4	100	90.466	ENSSDUG00000016411	si:ch211-11k18.4	100	90.466	Seriola_dumerili
ENSACLG00000007907	si:ch211-11k18.4	100	90.244	ENSSLDG00000019145	si:ch211-11k18.4	100	90.244	Seriola_lalandi_dorsalis
ENSACLG00000007907	si:ch211-11k18.4	98	58.613	ENSSLDG00000025395	si:dkey-98f17.5	99	58.613	Seriola_lalandi_dorsalis
ENSACLG00000007907	si:ch211-11k18.4	87	65.570	ENSSPUG00000010096	-	100	65.570	Sphenodon_punctatus
ENSACLG00000007907	si:ch211-11k18.4	100	91.796	ENSSPAG00000010697	si:ch211-11k18.4	100	91.796	Stegastes_partitus
ENSACLG00000007907	si:ch211-11k18.4	99	59.513	ENSSPAG00000018800	si:dkey-98f17.5	100	59.513	Stegastes_partitus
ENSACLG00000007907	si:ch211-11k18.4	100	86.475	ENSTRUG00000020291	si:ch211-11k18.4	100	86.475	Takifugu_rubripes
ENSACLG00000007907	si:ch211-11k18.4	99	58.628	ENSTRUG00000021287	si:dkey-98f17.5	100	58.628	Takifugu_rubripes
ENSACLG00000007907	si:ch211-11k18.4	99	67.699	ENSXETG00000031783	-	99	67.699	Xenopus_tropicalis
ENSACLG00000007907	si:ch211-11k18.4	99	59.170	ENSXCOG00000017002	si:dkey-98f17.5	100	59.170	Xiphophorus_couchianus
ENSACLG00000007907	si:ch211-11k18.4	99	82.405	ENSXCOG00000018094	si:ch211-11k18.4	99	81.278	Xiphophorus_couchianus
ENSACLG00000007907	si:ch211-11k18.4	99	58.850	ENSXMAG00000007688	si:dkey-98f17.5	95	58.850	Xiphophorus_maculatus
ENSACLG00000007907	si:ch211-11k18.4	99	88.196	ENSXMAG00000021235	si:ch211-11k18.4	99	88.196	Xiphophorus_maculatus