EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000008165 (Gene tree)
Gene ID: 113037501
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 8499 bases
Position: chr15:21909096-21917594
Accession: 113037501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000011961	SAP	PF02037.27	3.6e-11	1	1
ENSACLP00000011943	SAP	PF02037.27	3.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000012254	-	2334	-	ENSACLP00000011961	777 (aa)	-	-
ENSACLT00000012236	-	3576	-	ENSACLP00000011943	798 (aa)	XP_026050433	UPI000E405DB0

Gene Model

Click here to download ENSACLG00000008165's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000008165's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000008165	hnrnpub	76	34.146	ENSACLG00000018069	si:ch211-107m4.1	68	37.963

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000008165	hnrnpub	85	83.333	ENSG00000153187	HNRNPU	99	64.667	Homo_sapiens
ENSACLG00000008165	hnrnpub	100	86.121	ENSAPOG00000017400	hnrnpub	100	85.608	Acanthochromis_polyacanthus
ENSACLG00000008165	hnrnpub	85	83.333	ENSAMEG00000009145	HNRNPU	76	83.333	Ailuropoda_melanoleuca
ENSACLG00000008165	hnrnpub	100	84.596	ENSACIG00000012138	hnrnpub	96	91.191	Amphilophus_citrinellus
ENSACLG00000008165	hnrnpub	100	88.104	ENSAOCG00000015843	hnrnpub	100	87.097	Amphiprion_ocellaris
ENSACLG00000008165	hnrnpub	100	88.104	ENSAPEG00000014679	hnrnpub	100	87.097	Amphiprion_percula
ENSACLG00000008165	hnrnpub	98	87.343	ENSATEG00000016178	hnrnpub	97	85.930	Anabas_testudineus
ENSACLG00000008165	hnrnpub	86	73.810	ENSACAG00000004511	HNRNPU	77	73.810	Anolis_carolinensis
ENSACLG00000008165	hnrnpub	99	53.325	ENSANAG00000033895	-	80	83.333	Aotus_nancymaae
ENSACLG00000008165	hnrnpub	85	83.333	ENSBTAG00000007606	HNRNPU	78	83.333	Bos_taurus
ENSACLG00000008165	hnrnpub	85	83.333	ENSCJAG00000016914	HNRNPU	78	83.333	Callithrix_jacchus
ENSACLG00000008165	hnrnpub	80	57.433	ENSCAFG00020000918	HNRNPU	74	59.076	Canis_lupus_dingo
ENSACLG00000008165	hnrnpub	80	57.433	ENSCHIG00000004900	HNRNPU	80	83.333	Capra_hircus
ENSACLG00000008165	hnrnpub	85	85.714	ENSCPOG00000011887	HNRNPU	78	85.714	Cavia_porcellus
ENSACLG00000008165	hnrnpub	85	83.333	ENSCCAG00000037859	-	78	83.333	Cebus_capucinus
ENSACLG00000008165	hnrnpub	85	83.333	ENSCATG00000035273	HNRNPU	78	83.333	Cercocebus_atys
ENSACLG00000008165	hnrnpub	85	85.714	ENSCLAG00000007100	HNRNPU	78	85.714	Chinchilla_lanigera
ENSACLG00000008165	hnrnpub	80	57.098	ENSCSAG00000009219	HNRNPU	74	59.265	Chlorocebus_sabaeus
ENSACLG00000008165	hnrnpub	85	83.333	ENSCHOG00000001387	HNRNPU	76	83.333	Choloepus_hoffmanni
ENSACLG00000008165	hnrnpub	96	56.297	ENSCPBG00000009415	HNRNPU	79	66.102	Chrysemys_picta_bellii
ENSACLG00000008165	hnrnpub	85	83.333	ENSCANG00000022780	HNRNPU	77	83.333	Colobus_angolensis_palliatus
ENSACLG00000008165	hnrnpub	86	78.723	ENSCGRG00001020525	Hnrnpu	77	78.723	Cricetulus_griseus_chok1gshd
ENSACLG00000008165	hnrnpub	100	77.365	ENSCSEG00000010804	hnrnpub	100	78.922	Cynoglossus_semilaevis
ENSACLG00000008165	hnrnpub	90	79.630	ENSCVAG00000004280	hnrnpub	100	70.809	Cyprinodon_variegatus
ENSACLG00000008165	hnrnpub	100	61.097	ENSDARG00000015206	hnrnpua	100	59.181	Danio_rerio
ENSACLG00000008165	hnrnpub	100	60.749	ENSDARG00000004735	hnrnpub	100	56.647	Danio_rerio
ENSACLG00000008165	hnrnpub	84	83.333	ENSDNOG00000000215	HNRNPU	88	83.333	Dasypus_novemcinctus
ENSACLG00000008165	hnrnpub	78	58.768	ENSDORG00000015491	Hnrnpu	76	59.113	Dipodomys_ordii
ENSACLG00000008165	hnrnpub	85	83.333	ENSETEG00000014565	HNRNPU	78	83.333	Echinops_telfairi
ENSACLG00000008165	hnrnpub	81	57.231	ENSEASG00005003017	HNRNPU	74	59.395	Equus_asinus_asinus
ENSACLG00000008165	hnrnpub	81	57.077	ENSECAG00000007955	HNRNPU	74	59.236	Equus_caballus
ENSACLG00000008165	hnrnpub	100	72.695	ENSELUG00000010733	hnrnpub	100	72.706	Esox_lucius
ENSACLG00000008165	hnrnpub	74	83.333	ENSFCAG00000002156	HNRNPU	77	83.333	Felis_catus
ENSACLG00000008165	hnrnpub	94	60.526	ENSFDAG00000006026	HNRNPU	99	85.714	Fukomys_damarensis
ENSACLG00000008165	hnrnpub	100	80.145	ENSFHEG00000022639	hnrnpub	100	80.508	Fundulus_heteroclitus
ENSACLG00000008165	hnrnpub	100	72.048	ENSGMOG00000001755	hnrnpub	99	71.515	Gadus_morhua
ENSACLG00000008165	hnrnpub	83	68.966	ENSGALG00000010671	HNRNPU	78	68.966	Gallus_gallus
ENSACLG00000008165	hnrnpub	100	80.144	ENSGAFG00000009369	hnrnpub	100	79.712	Gambusia_affinis
ENSACLG00000008165	hnrnpub	100	75.513	ENSGACG00000004679	hnrnpub	99	76.236	Gasterosteus_aculeatus
ENSACLG00000008165	hnrnpub	85	83.333	ENSGGOG00000004061	HNRNPU	78	83.333	Gorilla_gorilla
ENSACLG00000008165	hnrnpub	100	99.499	ENSHBUG00000012290	hnrnpub	100	99.499	Haplochromis_burtoni
ENSACLG00000008165	hnrnpub	85	85.714	ENSHGLG00000010594	-	76	85.714	Heterocephalus_glaber_female
ENSACLG00000008165	hnrnpub	92	85.714	ENSHGLG00100015093	HNRNPU	99	74.138	Heterocephalus_glaber_male
ENSACLG00000008165	hnrnpub	85	76.968	ENSHCOG00000020091	hnrnpub	100	74.548	Hippocampus_comes
ENSACLG00000008165	hnrnpub	82	91.304	ENSIPUG00000007749	hnrnpu	96	78.947	Ictalurus_punctatus
ENSACLG00000008165	hnrnpub	86	78.723	ENSJJAG00000011371	Hnrnpu	79	78.723	Jaculus_jaculus
ENSACLG00000008165	hnrnpub	100	82.274	ENSKMAG00000004532	hnrnpub	100	82.274	Kryptolebias_marmoratus
ENSACLG00000008165	hnrnpub	100	83.374	ENSLBEG00000022520	hnrnpub	100	85.086	Labrus_bergylta
ENSACLG00000008165	hnrnpub	99	50.850	ENSLACG00000017463	HNRNPU	80	82.609	Latimeria_chalumnae
ENSACLG00000008165	hnrnpub	88	93.478	ENSLOCG00000016652	hnrnpua	78	93.478	Lepisosteus_oculatus
ENSACLG00000008165	hnrnpub	85	83.333	ENSLAFG00000021377	HNRNPU	81	83.333	Loxodonta_africana
ENSACLG00000008165	hnrnpub	85	83.333	ENSMFAG00000037308	HNRNPU	78	83.333	Macaca_fascicularis
ENSACLG00000008165	hnrnpub	80	57.098	ENSMMUG00000021098	HNRNPU	75	59.265	Macaca_mulatta
ENSACLG00000008165	hnrnpub	85	83.333	ENSMNEG00000043645	HNRNPU	78	83.333	Macaca_nemestrina
ENSACLG00000008165	hnrnpub	100	87.005	ENSMAMG00000007196	hnrnpub	100	86.881	Mastacembelus_armatus
ENSACLG00000008165	hnrnpub	100	99.871	ENSMZEG00005003185	hnrnpub	100	99.871	Maylandia_zebra
ENSACLG00000008165	hnrnpub	88	78.723	ENSMAUG00000008842	Hnrnpu	82	78.723	Mesocricetus_auratus
ENSACLG00000008165	hnrnpub	85	83.333	ENSMICG00000004616	HNRNPU	78	83.333	Microcebus_murinus
ENSACLG00000008165	hnrnpub	88	78.723	ENSMOCG00000015623	Hnrnpu	79	78.723	Microtus_ochrogaster
ENSACLG00000008165	hnrnpub	85	83.333	ENSMODG00000006515	HNRNPU	77	83.333	Monodelphis_domestica
ENSACLG00000008165	hnrnpub	96	87.063	ENSMALG00000018243	hnrnpub	98	86.252	Monopterus_albus
ENSACLG00000008165	hnrnpub	86	78.723	MGP_CAROLIEiJ_G0014962	Hnrnpu	81	78.723	Mus_caroli
ENSACLG00000008165	hnrnpub	86	78.723	ENSMUSG00000039630	Hnrnpu	79	78.723	Mus_musculus
ENSACLG00000008165	hnrnpub	86	78.723	MGP_PahariEiJ_G0028193	Hnrnpu	73	59.574	Mus_pahari
ENSACLG00000008165	hnrnpub	86	78.723	MGP_SPRETEiJ_G0015761	Hnrnpu	73	59.902	Mus_spretus
ENSACLG00000008165	hnrnpub	85	80.952	ENSMLUG00000000475	HNRNPU	81	77.083	Myotis_lucifugus
ENSACLG00000008165	hnrnpub	80	55.927	ENSNGAG00000019075	Hnrnpu	73	59.967	Nannospalax_galili
ENSACLG00000008165	hnrnpub	100	99.123	ENSNBRG00000017855	hnrnpub	100	99.123	Neolamprologus_brichardi
ENSACLG00000008165	hnrnpub	78	83.333	ENSMEUG00000000541	HNRNPU	90	83.333	Notamacropus_eugenii
ENSACLG00000008165	hnrnpub	100	95.363	ENSONIG00000001260	hnrnpub	100	95.363	Oreochromis_niloticus
ENSACLG00000008165	hnrnpub	83	83.333	ENSOCUG00000014469	HNRNPU	69	83.333	Oryctolagus_cuniculus
ENSACLG00000008165	hnrnpub	100	82.077	ENSORLG00000016114	hnrnpub	100	82.447	Oryzias_latipes
ENSACLG00000008165	hnrnpub	100	81.165	ENSORLG00020005363	hnrnpub	100	82.818	Oryzias_latipes_hni
ENSACLG00000008165	hnrnpub	100	81.165	ENSORLG00015001190	hnrnpub	100	82.695	Oryzias_latipes_hsok
ENSACLG00000008165	hnrnpub	100	81.908	ENSOMEG00000014951	hnrnpub	100	82.200	Oryzias_melastigma
ENSACLG00000008165	hnrnpub	99	52.432	ENSOGAG00000014024	HNRNPU	80	83.333	Otolemur_garnettii
ENSACLG00000008165	hnrnpub	85	83.333	ENSOARG00000004985	HNRNPU	87	83.333	Ovis_aries
ENSACLG00000008165	hnrnpub	85	83.333	ENSPPAG00000038652	HNRNPU	81	83.333	Pan_paniscus
ENSACLG00000008165	hnrnpub	87	83.333	ENSPPRG00000002662	HNRNPU	78	83.333	Panthera_pardus
ENSACLG00000008165	hnrnpub	85	83.333	ENSPTRG00000002182	HNRNPU	81	83.333	Pan_troglodytes
ENSACLG00000008165	hnrnpub	80	57.098	ENSPANG00000011643	HNRNPU	79	60.413	Papio_anubis
ENSACLG00000008165	hnrnpub	100	68.485	ENSPKIG00000022332	hnrnpub	100	67.197	Paramormyrops_kingsleyae
ENSACLG00000008165	hnrnpub	100	66.910	ENSPKIG00000006885	hnrnpua	100	65.249	Paramormyrops_kingsleyae
ENSACLG00000008165	hnrnpub	85	83.333	ENSPCIG00000008657	HNRNPU	77	83.333	Phascolarctos_cinereus
ENSACLG00000008165	hnrnpub	100	81.585	ENSPFOG00000002908	hnrnpub	100	82.195	Poecilia_formosa
ENSACLG00000008165	hnrnpub	100	81.098	ENSPLAG00000004160	hnrnpub	100	81.951	Poecilia_latipinna
ENSACLG00000008165	hnrnpub	80	56.338	ENSPCOG00000003883	-	75	58.710	Propithecus_coquereli
ENSACLG00000008165	hnrnpub	85	83.333	ENSPCOG00000018655	-	80	83.333	Propithecus_coquereli
ENSACLG00000008165	hnrnpub	85	83.333	ENSPVAG00000002581	HNRNPU	78	83.333	Pteropus_vampyrus
ENSACLG00000008165	hnrnpub	100	99.624	ENSPNYG00000021642	hnrnpub	100	99.624	Pundamilia_nyererei
ENSACLG00000008165	hnrnpub	100	66.707	ENSPNAG00000001055	hnrnpub	100	66.135	Pygocentrus_nattereri
ENSACLG00000008165	hnrnpub	76	59.543	ENSRNOG00000033790	Hnrnpu	74	59.295	Rattus_norvegicus
ENSACLG00000008165	hnrnpub	80	56.474	ENSRBIG00000031519	HNRNPU	78	59.725	Rhinopithecus_bieti
ENSACLG00000008165	hnrnpub	82	56.109	ENSRROG00000041642	HNRNPU	76	61.552	Rhinopithecus_roxellana
ENSACLG00000008165	hnrnpub	100	65.860	ENSSFOG00015019004	hnrnpu	99	63.364	Scleropages_formosus
ENSACLG00000008165	hnrnpub	100	67.515	ENSSFOG00015001124	hnrnpub	82	72.901	Scleropages_formosus
ENSACLG00000008165	hnrnpub	100	80.618	ENSSMAG00000003607	hnrnpub	100	82.164	Scophthalmus_maximus
ENSACLG00000008165	hnrnpub	100	87.010	ENSSDUG00000005912	hnrnpub	100	87.745	Seriola_dumerili
ENSACLG00000008165	hnrnpub	100	86.691	ENSSLDG00000004899	hnrnpub	100	86.569	Seriola_lalandi_dorsalis
ENSACLG00000008165	hnrnpub	87	82.927	ENSSPUG00000011393	HNRNPU	89	58.030	Sphenodon_punctatus
ENSACLG00000008165	hnrnpub	100	87.097	ENSSPAG00000011853	hnrnpub	100	86.725	Stegastes_partitus
ENSACLG00000008165	hnrnpub	85	83.333	ENSSSCG00000010877	HNRNPU	78	83.333	Sus_scrofa
ENSACLG00000008165	hnrnpub	100	78.007	ENSTRUG00000007759	hnrnpub	100	79.121	Takifugu_rubripes
ENSACLG00000008165	hnrnpub	100	72.573	ENSTNIG00000009725	hnrnpub	99	76.923	Tetraodon_nigroviridis
ENSACLG00000008165	hnrnpub	85	83.333	ENSUAMG00000021120	HNRNPU	78	83.333	Ursus_americanus
ENSACLG00000008165	hnrnpub	85	74.419	ENSUMAG00000012322	HNRNPU	84	74.419	Ursus_maritimus
ENSACLG00000008165	hnrnpub	78	83.333	ENSVPAG00000010520	HNRNPU	81	83.333	Vicugna_pacos
ENSACLG00000008165	hnrnpub	80	57.433	ENSVVUG00000026524	HNRNPU	74	59.076	Vulpes_vulpes
ENSACLG00000008165	hnrnpub	99	51.232	ENSXETG00000011386	hnrnpu	99	52.934	Xenopus_tropicalis
ENSACLG00000008165	hnrnpub	100	83.049	ENSXMAG00000010356	hnrnpub	100	83.537	Xiphophorus_maculatus