EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000008367 (Gene tree)
Gene ID: 113008818
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 5628 bases
Position: chr17:16751574-16757201
Accession: 113008818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000012296	RtcB	PF01139.17	7.7e-147	1	1
ENSACLP00000012280	RtcB	PF01139.17	1.1e-146	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000012580	-	3862	-	ENSACLP00000012280	505 (aa)	XP_026002417	UPI00032995DD
ENSACLT00000012596	-	3361	-	ENSACLP00000012296	460 (aa)	-	UPI0003BCBAAF

Gene Model

Click here to download ENSACLG00000008367's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000008367's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000008367	rtcb	100	94.130	ENSG00000100220	RTCB	100	93.267	Homo_sapiens
ENSACLG00000008367	rtcb	100	97.174	ENSAPOG00000006040	rtcb	100	96.436	Acanthochromis_polyacanthus
ENSACLG00000008367	rtcb	100	94.130	ENSAMEG00000016152	RTCB	100	93.267	Ailuropoda_melanoleuca
ENSACLG00000008367	rtcb	100	91.739	ENSACIG00000009083	rtcb	100	91.683	Amphilophus_citrinellus
ENSACLG00000008367	rtcb	100	97.174	ENSAOCG00000005662	rtcb	100	97.174	Amphiprion_ocellaris
ENSACLG00000008367	rtcb	100	97.174	ENSAPEG00000024701	rtcb	100	96.436	Amphiprion_percula
ENSACLG00000008367	rtcb	100	93.261	ENSAPEG00000024653	rtcb	100	91.581	Amphiprion_percula
ENSACLG00000008367	rtcb	100	96.522	ENSATEG00000000618	rtcb	100	95.644	Anabas_testudineus
ENSACLG00000008367	rtcb	100	93.913	ENSACAG00000014817	RTCB	100	90.366	Anolis_carolinensis
ENSACLG00000008367	rtcb	72	94.444	ENSANAG00000023724	-	84	94.444	Aotus_nancymaae
ENSACLG00000008367	rtcb	100	79.783	ENSANAG00000018191	-	91	79.406	Aotus_nancymaae
ENSACLG00000008367	rtcb	100	95.652	ENSAMXG00000042320	rtcb	100	94.851	Astyanax_mexicanus
ENSACLG00000008367	rtcb	100	94.130	ENSBTAG00000011070	RTCB	100	93.663	Bos_taurus
ENSACLG00000008367	rtcb	100	76.739	WBGene00008877	rtcb-1	100	75.248	Caenorhabditis_elegans
ENSACLG00000008367	rtcb	100	94.130	ENSCJAG00000006128	RTCB	100	93.069	Callithrix_jacchus
ENSACLG00000008367	rtcb	100	94.130	ENSCAFG00000001785	RTCB	100	93.267	Canis_familiaris
ENSACLG00000008367	rtcb	100	89.783	ENSCAFG00000010789	-	100	89.109	Canis_familiaris
ENSACLG00000008367	rtcb	87	89.091	ENSCAFG00020018953	-	99	89.091	Canis_lupus_dingo
ENSACLG00000008367	rtcb	100	94.130	ENSCAFG00020004890	-	100	93.267	Canis_lupus_dingo
ENSACLG00000008367	rtcb	50	69.869	ENSCHIG00000017428	-	100	69.869	Capra_hircus
ENSACLG00000008367	rtcb	100	94.130	ENSCHIG00000027009	-	100	93.465	Capra_hircus
ENSACLG00000008367	rtcb	100	94.130	ENSTSYG00000012320	RTCB	100	93.267	Carlito_syrichta
ENSACLG00000008367	rtcb	100	94.130	ENSCAPG00000011647	RTCB	96	93.291	Cavia_aperea
ENSACLG00000008367	rtcb	100	94.130	ENSCCAG00000000618	RTCB	100	93.069	Cebus_capucinus
ENSACLG00000008367	rtcb	100	93.913	ENSCATG00000033424	RTCB	100	93.267	Cercocebus_atys
ENSACLG00000008367	rtcb	100	93.913	ENSCLAG00000007997	RTCB	100	93.069	Chinchilla_lanigera
ENSACLG00000008367	rtcb	100	93.913	ENSCSAG00000008351	RTCB	100	93.069	Chlorocebus_sabaeus
ENSACLG00000008367	rtcb	100	79.406	ENSCHOG00000009123	RTCB	100	79.406	Choloepus_hoffmanni
ENSACLG00000008367	rtcb	100	93.696	ENSCPBG00000023184	RTCB	100	92.871	Chrysemys_picta_bellii
ENSACLG00000008367	rtcb	100	85.435	ENSCING00000003830	-	100	82.574	Ciona_intestinalis
ENSACLG00000008367	rtcb	100	85.217	ENSCSAVG00000008124	-	99	82.772	Ciona_savignyi
ENSACLG00000008367	rtcb	100	90.000	ENSCANG00000001891	RTCB	100	89.703	Colobus_angolensis_palliatus
ENSACLG00000008367	rtcb	100	93.913	ENSCGRG00001011173	Rtcb	100	93.267	Cricetulus_griseus_chok1gshd
ENSACLG00000008367	rtcb	100	94.130	ENSCGRG00000009587	-	96	93.631	Cricetulus_griseus_crigri
ENSACLG00000008367	rtcb	100	95.652	ENSCSEG00000003986	rtcb	100	94.653	Cynoglossus_semilaevis
ENSACLG00000008367	rtcb	90	94.471	ENSCVAG00000000569	rtcb	95	94.471	Cyprinodon_variegatus
ENSACLG00000008367	rtcb	100	96.304	ENSDARG00000101047	rtcb	100	95.050	Danio_rerio
ENSACLG00000008367	rtcb	80	89.189	ENSDNOG00000012425	RTCB	99	89.189	Dasypus_novemcinctus
ENSACLG00000008367	rtcb	100	93.913	ENSDORG00000010855	Rtcb	100	93.267	Dipodomys_ordii
ENSACLG00000008367	rtcb	100	86.739	FBgn0032781	RtcB	99	85.089	Drosophila_melanogaster
ENSACLG00000008367	rtcb	100	88.043	ENSETEG00000001988	RTCB	100	87.525	Echinops_telfairi
ENSACLG00000008367	rtcb	100	86.739	ENSEBUG00000014235	rtcb	100	85.743	Eptatretus_burgeri
ENSACLG00000008367	rtcb	100	94.130	ENSEASG00005019059	RTCB	100	93.465	Equus_asinus_asinus
ENSACLG00000008367	rtcb	100	94.130	ENSECAG00000023998	RTCB	100	93.465	Equus_caballus
ENSACLG00000008367	rtcb	97	84.787	ENSEEUG00000006251	RTCB	100	84.787	Erinaceus_europaeus
ENSACLG00000008367	rtcb	100	82.420	ENSELUG00000009275	rtcb	100	82.420	Esox_lucius
ENSACLG00000008367	rtcb	100	94.130	ENSFCAG00000026480	RTCB	100	93.267	Felis_catus
ENSACLG00000008367	rtcb	100	94.565	ENSFALG00000013334	RTCB	100	93.465	Ficedula_albicollis
ENSACLG00000008367	rtcb	100	94.130	ENSFDAG00000018150	RTCB	100	93.069	Fukomys_damarensis
ENSACLG00000008367	rtcb	100	96.304	ENSFHEG00000009595	rtcb	100	95.842	Fundulus_heteroclitus
ENSACLG00000008367	rtcb	100	93.261	ENSGMOG00000018882	rtcb	100	91.683	Gadus_morhua
ENSACLG00000008367	rtcb	100	93.913	ENSGALG00000012611	RTCB	100	92.871	Gallus_gallus
ENSACLG00000008367	rtcb	100	96.739	ENSGAFG00000004198	rtcb	100	96.238	Gambusia_affinis
ENSACLG00000008367	rtcb	100	95.217	ENSGACG00000000586	rtcb	100	94.059	Gasterosteus_aculeatus
ENSACLG00000008367	rtcb	93	92.340	ENSGAGG00000019133	RTCB	98	92.340	Gopherus_agassizii
ENSACLG00000008367	rtcb	100	94.130	ENSGGOG00000011402	RTCB	100	93.267	Gorilla_gorilla
ENSACLG00000008367	rtcb	100	100.000	ENSHBUG00000020571	rtcb	100	100.000	Haplochromis_burtoni
ENSACLG00000008367	rtcb	99	67.102	ENSHGLG00000001066	-	99	66.949	Heterocephalus_glaber_female
ENSACLG00000008367	rtcb	100	94.130	ENSHGLG00000004492	RTCB	100	93.069	Heterocephalus_glaber_female
ENSACLG00000008367	rtcb	100	94.130	ENSHGLG00100008965	RTCB	100	93.069	Heterocephalus_glaber_male
ENSACLG00000008367	rtcb	100	93.723	ENSHCOG00000006450	rtcb	100	92.505	Hippocampus_comes
ENSACLG00000008367	rtcb	100	95.652	ENSIPUG00000015443	rtcb	100	95.248	Ictalurus_punctatus
ENSACLG00000008367	rtcb	100	93.913	ENSSTOG00000003878	RTCB	100	92.871	Ictidomys_tridecemlineatus
ENSACLG00000008367	rtcb	100	94.130	ENSJJAG00000010667	Rtcb	100	93.663	Jaculus_jaculus
ENSACLG00000008367	rtcb	100	96.739	ENSKMAG00000013178	rtcb	100	94.851	Kryptolebias_marmoratus
ENSACLG00000008367	rtcb	100	94.783	ENSLBEG00000000214	rtcb	100	93.663	Labrus_bergylta
ENSACLG00000008367	rtcb	100	96.087	ENSLBEG00000010566	RTCB	100	94.851	Labrus_bergylta
ENSACLG00000008367	rtcb	100	94.130	ENSLACG00000013033	RTCB	100	93.069	Latimeria_chalumnae
ENSACLG00000008367	rtcb	100	95.217	ENSLOCG00000016515	rtcb	99	94.257	Lepisosteus_oculatus
ENSACLG00000008367	rtcb	100	93.478	ENSLAFG00000002082	RTCB	100	92.673	Loxodonta_africana
ENSACLG00000008367	rtcb	100	93.913	ENSMFAG00000034419	RTCB	100	93.069	Macaca_fascicularis
ENSACLG00000008367	rtcb	100	93.913	ENSMMUG00000006720	RTCB	100	93.069	Macaca_mulatta
ENSACLG00000008367	rtcb	100	93.913	ENSMNEG00000040669	RTCB	100	93.069	Macaca_nemestrina
ENSACLG00000008367	rtcb	100	93.913	ENSMLEG00000040505	RTCB	100	93.267	Mandrillus_leucophaeus
ENSACLG00000008367	rtcb	100	96.739	ENSMAMG00000020676	rtcb	100	95.842	Mastacembelus_armatus
ENSACLG00000008367	rtcb	100	100.000	ENSMZEG00005018942	rtcb	100	100.000	Maylandia_zebra
ENSACLG00000008367	rtcb	100	93.506	ENSMGAG00000012805	RTCB	100	92.505	Meleagris_gallopavo
ENSACLG00000008367	rtcb	62	98.230	ENSMAUG00000008301	Rtcb	100	98.230	Mesocricetus_auratus
ENSACLG00000008367	rtcb	100	75.870	ENSMICG00000036677	-	100	74.455	Microcebus_murinus
ENSACLG00000008367	rtcb	100	94.130	ENSMICG00000013303	-	100	93.069	Microcebus_murinus
ENSACLG00000008367	rtcb	100	94.348	ENSMOCG00000002440	Rtcb	100	93.663	Microtus_ochrogaster
ENSACLG00000008367	rtcb	100	97.174	ENSMMOG00000005987	rtcb	100	96.436	Mola_mola
ENSACLG00000008367	rtcb	100	94.130	ENSMODG00000001414	RTCB	100	93.267	Monodelphis_domestica
ENSACLG00000008367	rtcb	100	96.304	ENSMALG00000007603	rtcb	100	94.851	Monopterus_albus
ENSACLG00000008367	rtcb	100	94.130	MGP_CAROLIEiJ_G0015689	Rtcb	100	93.267	Mus_caroli
ENSACLG00000008367	rtcb	100	94.130	ENSMUSG00000001783	Rtcb	100	93.267	Mus_musculus
ENSACLG00000008367	rtcb	100	94.130	MGP_PahariEiJ_G0031396	Rtcb	100	93.267	Mus_pahari
ENSACLG00000008367	rtcb	100	94.130	MGP_SPRETEiJ_G0016507	Rtcb	100	93.267	Mus_spretus
ENSACLG00000008367	rtcb	100	94.130	ENSMPUG00000012285	RTCB	100	93.267	Mustela_putorius_furo
ENSACLG00000008367	rtcb	100	91.739	ENSMLUG00000007803	RTCB	100	90.335	Myotis_lucifugus
ENSACLG00000008367	rtcb	72	98.667	ENSNGAG00000005093	Rtcb	100	98.667	Nannospalax_galili
ENSACLG00000008367	rtcb	100	99.783	ENSNBRG00000017202	rtcb	100	99.604	Neolamprologus_brichardi
ENSACLG00000008367	rtcb	100	94.130	ENSNLEG00000004960	RTCB	100	93.267	Nomascus_leucogenys
ENSACLG00000008367	rtcb	88	98.214	ENSMEUG00000007809	-	88	98.214	Notamacropus_eugenii
ENSACLG00000008367	rtcb	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSACLG00000008367	rtcb	100	62.178	ENSODEG00000005042	-	100	62.178	Octodon_degus
ENSACLG00000008367	rtcb	87	98.113	ENSODEG00000013033	-	100	98.113	Octodon_degus
ENSACLG00000008367	rtcb	100	98.478	ENSONIG00000007474	rtcb	100	98.218	Oreochromis_niloticus
ENSACLG00000008367	rtcb	100	93.913	ENSOANG00000005524	RTCB	100	92.871	Ornithorhynchus_anatinus
ENSACLG00000008367	rtcb	93	92.766	ENSOCUG00000008270	RTCB	96	92.766	Oryctolagus_cuniculus
ENSACLG00000008367	rtcb	100	97.174	ENSORLG00000020093	rtcb	100	96.040	Oryzias_latipes
ENSACLG00000008367	rtcb	100	96.739	ENSORLG00020003706	rtcb	100	95.644	Oryzias_latipes_hni
ENSACLG00000008367	rtcb	100	96.957	ENSORLG00015002968	rtcb	100	95.842	Oryzias_latipes_hsok
ENSACLG00000008367	rtcb	100	96.522	ENSOMEG00000021278	rtcb	100	95.446	Oryzias_melastigma
ENSACLG00000008367	rtcb	100	93.478	ENSOGAG00000001425	RTCB	100	92.475	Otolemur_garnettii
ENSACLG00000008367	rtcb	100	94.130	ENSOARG00000018008	RTCB	100	93.465	Ovis_aries
ENSACLG00000008367	rtcb	100	94.130	ENSPPAG00000028667	RTCB	100	93.267	Pan_paniscus
ENSACLG00000008367	rtcb	100	94.130	ENSPPRG00000004038	RTCB	100	93.267	Panthera_pardus
ENSACLG00000008367	rtcb	100	89.348	ENSPTIG00000020499	RTCB	97	90.316	Panthera_tigris_altaica
ENSACLG00000008367	rtcb	100	94.130	ENSPTRG00000014287	RTCB	100	93.267	Pan_troglodytes
ENSACLG00000008367	rtcb	100	93.913	ENSPANG00000016035	RTCB	100	93.069	Papio_anubis
ENSACLG00000008367	rtcb	100	95.870	ENSPKIG00000001881	rtcb	100	94.653	Paramormyrops_kingsleyae
ENSACLG00000008367	rtcb	100	93.478	ENSPSIG00000011690	RTCB	100	93.478	Pelodiscus_sinensis
ENSACLG00000008367	rtcb	100	95.870	ENSPMGG00000016672	rtcb	100	95.248	Periophthalmus_magnuspinnatus
ENSACLG00000008367	rtcb	100	94.130	ENSPEMG00000019548	Rtcb	100	93.267	Peromyscus_maniculatus_bairdii
ENSACLG00000008367	rtcb	100	92.391	ENSPMAG00000005657	rtcb	100	91.089	Petromyzon_marinus
ENSACLG00000008367	rtcb	100	94.130	ENSPCIG00000009467	RTCB	100	93.267	Phascolarctos_cinereus
ENSACLG00000008367	rtcb	100	96.957	ENSPFOG00000003058	rtcb	100	96.436	Poecilia_formosa
ENSACLG00000008367	rtcb	100	96.739	ENSPLAG00000017663	rtcb	100	96.238	Poecilia_latipinna
ENSACLG00000008367	rtcb	100	96.957	ENSPMEG00000006227	rtcb	100	96.436	Poecilia_mexicana
ENSACLG00000008367	rtcb	100	96.739	ENSPREG00000018467	rtcb	100	96.040	Poecilia_reticulata
ENSACLG00000008367	rtcb	100	94.130	ENSPPYG00000011752	RTCB	100	93.267	Pongo_abelii
ENSACLG00000008367	rtcb	93	76.695	ENSPCAG00000013641	RTCB	100	76.695	Procavia_capensis
ENSACLG00000008367	rtcb	100	94.130	ENSPCOG00000017243	RTCB	100	93.267	Propithecus_coquereli
ENSACLG00000008367	rtcb	92	93.412	ENSPVAG00000002380	RTCB	100	92.340	Pteropus_vampyrus
ENSACLG00000008367	rtcb	100	100.000	ENSPNYG00000022760	rtcb	100	100.000	Pundamilia_nyererei
ENSACLG00000008367	rtcb	100	95.435	ENSPNAG00000009209	rtcb	100	95.050	Pygocentrus_nattereri
ENSACLG00000008367	rtcb	100	94.130	ENSRNOG00000004813	Rtcb	100	93.267	Rattus_norvegicus
ENSACLG00000008367	rtcb	100	85.178	ENSRBIG00000042090	RTCB	100	85.178	Rhinopithecus_bieti
ENSACLG00000008367	rtcb	99	90.611	ENSSBOG00000020085	-	100	88.713	Saimiri_boliviensis_boliviensis
ENSACLG00000008367	rtcb	100	94.130	ENSSHAG00000016277	RTCB	100	93.882	Sarcophilus_harrisii
ENSACLG00000008367	rtcb	100	94.565	ENSSFOG00015011572	RTCB	100	93.663	Scleropages_formosus
ENSACLG00000008367	rtcb	100	96.522	ENSSFOG00015000763	rtcb	100	94.851	Scleropages_formosus
ENSACLG00000008367	rtcb	100	92.826	ENSSMAG00000005096	rtcb	100	91.881	Scophthalmus_maximus
ENSACLG00000008367	rtcb	100	95.000	ENSSDUG00000012605	rtcb	100	94.059	Seriola_dumerili
ENSACLG00000008367	rtcb	100	95.000	ENSSLDG00000019458	rtcb	100	94.257	Seriola_lalandi_dorsalis
ENSACLG00000008367	rtcb	70	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSACLG00000008367	rtcb	100	93.478	ENSSPUG00000012814	RTCB	100	92.277	Sphenodon_punctatus
ENSACLG00000008367	rtcb	100	97.174	ENSSPAG00000004623	rtcb	100	96.436	Stegastes_partitus
ENSACLG00000008367	rtcb	100	94.130	ENSSSCG00000000158	RTCB	100	93.267	Sus_scrofa
ENSACLG00000008367	rtcb	100	94.565	ENSTGUG00000010947	RTCB	99	93.465	Taeniopygia_guttata
ENSACLG00000008367	rtcb	100	96.522	ENSTRUG00000009880	rtcb	100	96.522	Takifugu_rubripes
ENSACLG00000008367	rtcb	100	95.217	ENSTNIG00000002484	rtcb	100	94.455	Tetraodon_nigroviridis
ENSACLG00000008367	rtcb	97	84.787	ENSTBEG00000004418	RTCB	100	80.396	Tupaia_belangeri
ENSACLG00000008367	rtcb	92	93.176	ENSTTRG00000006417	RTCB	100	92.128	Tursiops_truncatus
ENSACLG00000008367	rtcb	100	94.130	ENSUAMG00000022792	RTCB	100	93.267	Ursus_americanus
ENSACLG00000008367	rtcb	100	94.130	ENSUMAG00000017225	RTCB	100	93.267	Ursus_maritimus
ENSACLG00000008367	rtcb	100	93.913	ENSVPAG00000005375	RTCB	100	93.069	Vicugna_pacos
ENSACLG00000008367	rtcb	100	94.130	ENSVVUG00000023408	RTCB	100	93.857	Vulpes_vulpes
ENSACLG00000008367	rtcb	100	93.478	ENSXETG00000011523	rtcb	100	92.475	Xenopus_tropicalis
ENSACLG00000008367	rtcb	50	94.323	ENSXCOG00000011944	rtcb	100	94.323	Xiphophorus_couchianus
ENSACLG00000008367	rtcb	100	96.739	ENSXMAG00000002855	rtcb	100	96.040	Xiphophorus_maculatus