EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000008384 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 877 bases
Position: chr23:20604947-20605823
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000012282	FDF	PF09532.10	6.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000012582	-	825	-	ENSACLP00000012282	274 (aa)	-	-

Gene Model

Click here to download ENSACLG00000008384's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000008384's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000008384	-	99	88.502	ENSACLG00000011955	-	100	85.366
ENSACLG00000008384	-	99	90.244	ENSACLG00000019624	-	100	87.108
ENSACLG00000008384	-	57	83.908	ENSACLG00000013004	-	62	78.736
ENSACLG00000008384	-	56	84.795	ENSACLG00000027552	-	59	79.532

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000008384	-	77	44.196	ENSACIG00000003147	LSM14B	90	45.415	Amphilophus_citrinellus
ENSACLG00000008384	-	78	48.523	ENSAOCG00000006667	LSM14B	59	50.633	Amphiprion_ocellaris
ENSACLG00000008384	-	64	39.796	ENSATEG00000016603	lsm14b	52	41.117	Anabas_testudineus
ENSACLG00000008384	-	68	49.524	ENSCSEG00000020669	LSM14B	54	45.714	Cynoglossus_semilaevis
ENSACLG00000008384	-	77	43.290	ENSHCOG00000018747	LSM14B	59	44.589	Hippocampus_comes
ENSACLG00000008384	-	65	53.769	ENSKMAG00000012834	-	90	54.634	Kryptolebias_marmoratus
ENSACLG00000008384	-	73	49.038	ENSLBEG00000007951	LSM14B	54	67.826	Labrus_bergylta
ENSACLG00000008384	-	78	49.138	ENSMAMG00000024124	LSM14B	58	45.259	Mastacembelus_armatus
ENSACLG00000008384	-	99	97.407	ENSMZEG00005026087	-	100	97.407	Maylandia_zebra
ENSACLG00000008384	-	99	97.037	ENSMZEG00005002688	-	100	97.037	Maylandia_zebra
ENSACLG00000008384	-	56	84.211	ENSMZEG00005009676	-	59	78.947	Maylandia_zebra
ENSACLG00000008384	-	66	73.786	ENSMZEG00005026001	LSM14B	59	72.273	Maylandia_zebra
ENSACLG00000008384	-	63	30.366	ENSMMOG00000020042	lsm14b	55	33.498	Mola_mola
ENSACLG00000008384	-	66	50.746	ENSMALG00000022251	LSM14B	53	50.244	Monopterus_albus
ENSACLG00000008384	-	68	38.000	ENSMALG00000004783	lsm14b	50	36.318	Monopterus_albus
ENSACLG00000008384	-	81	44.082	ENSORLG00000028353	LSM14B	66	43.701	Oryzias_latipes
ENSACLG00000008384	-	81	44.490	ENSORLG00015013157	LSM14B	66	44.094	Oryzias_latipes_hsok
ENSACLG00000008384	-	68	38.647	ENSPFOG00000005631	lsm14b	52	36.453	Poecilia_formosa
ENSACLG00000008384	-	80	42.857	ENSPLAG00000005793	LSM14B	66	44.000	Poecilia_latipinna
ENSACLG00000008384	-	68	38.164	ENSPLAG00000002449	lsm14b	52	35.961	Poecilia_latipinna
ENSACLG00000008384	-	62	49.735	ENSPMEG00000022953	LSM14B	53	50.739	Poecilia_mexicana
ENSACLG00000008384	-	71	48.020	ENSPREG00000007828	LSM14B	74	47.087	Poecilia_reticulata
ENSACLG00000008384	-	66	52.475	ENSSDUG00000022770	LSM14B	55	57.005	Seriola_dumerili
ENSACLG00000008384	-	79	44.541	ENSSLDG00000011354	-	81	46.581	Seriola_lalandi_dorsalis
ENSACLG00000008384	-	81	38.115	ENSSPAG00000018854	-	82	37.445	Stegastes_partitus
ENSACLG00000008384	-	66	47.236	ENSTRUG00000001529	LSM14B	53	46.569	Takifugu_rubripes