EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000008485 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 4278 bases
Position: chr19:1222155-1226432
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000012417	Exo_endo_phos	PF03372.23	4.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000012719	-	738	-	ENSACLP00000012417	245 (aa)	-	-

Gene Model

Click here to download ENSACLG00000008485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000008485's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000008485	-	87	30.415	ENSACLG00000005243	-	82	31.163
ENSACLG00000008485	-	88	31.222	ENSACLG00000027834	-	91	31.222
ENSACLG00000008485	-	100	98.367	ENSACLG00000003542	-	100	98.367
ENSACLG00000008485	-	87	31.336	ENSACLG00000001544	-	56	31.336
ENSACLG00000008485	-	93	31.092	ENSACLG00000003399	-	61	31.092

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000008485	-	91	99.099	ENSMZEG00005019985	-	50	99.099	Maylandia_zebra
ENSACLG00000008485	-	91	98.198	ENSMZEG00005027508	-	90	98.198	Maylandia_zebra
ENSACLG00000008485	-	91	99.099	ENSMZEG00005020264	-	94	99.099	Maylandia_zebra
ENSACLG00000008485	-	99	42.276	ENSORLG00000028210	-	91	42.276	Oryzias_latipes
ENSACLG00000008485	-	89	45.909	ENSORLG00020010001	-	90	45.909	Oryzias_latipes_hni
ENSACLG00000008485	-	92	41.991	ENSORLG00020003602	-	88	41.991	Oryzias_latipes_hni
ENSACLG00000008485	-	91	75.676	ENSPKIG00000013429	-	91	75.676	Paramormyrops_kingsleyae
ENSACLG00000008485	-	93	87.225	ENSPKIG00000011842	-	95	87.225	Paramormyrops_kingsleyae
ENSACLG00000008485	-	91	48.918	ENSPNAG00000002115	-	95	48.918	Pygocentrus_nattereri