EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000008615 (Gene tree)
Gene ID: 113028417
Gene Symbol: -
Alias: RAB5CL|RABL
Full Name: ras-related protein Rab-5C-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 8013 bases
Position: chr8:12978773-12986785
Accession: 113028417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000012622	MMR_HSR1	PF01926.23	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000012929	-	2343	-	ENSACLP00000012622	222 (aa)	XP_026034446	UPI00032A020F

Gene Model

Click here to download ENSACLG00000008615's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000008615's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000008615	-	74	47.337	ENSACLG00000018262	rab25a	80	47.337
ENSACLG00000008615	-	73	43.210	ENSACLG00000000860	-	72	43.210
ENSACLG00000008615	-	69	38.312	ENSACLG00000001646	-	73	38.312
ENSACLG00000008615	-	80	42.541	ENSACLG00000013734	-	85	42.541
ENSACLG00000008615	-	75	39.181	ENSACLG00000027006	zgc:101559	72	39.181
ENSACLG00000008615	-	88	41.837	ENSACLG00000001775	rab11a	92	41.837
ENSACLG00000008615	-	65	32.877	ENSACLG00000009103	si:cabz01085950.1	72	32.877
ENSACLG00000008615	-	68	35.443	ENSACLG00000008602	RAB29	95	35.443
ENSACLG00000008615	-	71	32.298	ENSACLG00000005093	rab34a	60	32.298
ENSACLG00000008615	-	72	34.146	ENSACLG00000021109	si:dkey-13a21.4	79	34.146
ENSACLG00000008615	-	53	30.328	ENSACLG00000011996	arl8a	61	30.328
ENSACLG00000008615	-	91	39.706	ENSACLG00000026487	rab6bb	98	39.706
ENSACLG00000008615	-	88	41.837	ENSACLG00000013668	rab1ba	96	41.837
ENSACLG00000008615	-	89	47.525	ENSACLG00000001218	RAB17	71	50.920
ENSACLG00000008615	-	60	30.282	ENSACLG00000021872	arl8bb	73	30.282
ENSACLG00000008615	-	73	39.752	ENSACLG00000026336	rab15	76	39.752
ENSACLG00000008615	-	84	32.812	ENSACLG00000025632	rabl2	83	32.812
ENSACLG00000008615	-	91	41.872	ENSACLG00000015289	rab18b	95	41.872
ENSACLG00000008615	-	75	44.311	ENSACLG00000023526	rab30	82	44.311
ENSACLG00000008615	-	74	36.145	ENSACLG00000027590	-	77	36.585
ENSACLG00000008615	-	71	47.134	ENSACLG00000018852	-	71	47.134
ENSACLG00000008615	-	85	39.153	ENSACLG00000013505	-	87	39.153
ENSACLG00000008615	-	73	47.239	ENSACLG00000005446	-	75	47.239
ENSACLG00000008615	-	92	39.512	ENSACLG00000025138	rab6ba	99	39.512
ENSACLG00000008615	-	74	32.121	ENSACLG00000027677	KRAS	85	31.902
ENSACLG00000008615	-	73	36.585	ENSACLG00000007514	rab42a	76	36.585
ENSACLG00000008615	-	74	42.941	ENSACLG00000018847	RAB7A	82	42.941
ENSACLG00000008615	-	73	47.239	ENSACLG00000007076	rab11bb	75	47.239
ENSACLG00000008615	-	88	43.878	ENSACLG00000007644	rab1ab	97	43.878
ENSACLG00000008615	-	78	31.285	ENSACLG00000001181	hrasb	94	31.285
ENSACLG00000008615	-	73	38.554	ENSACLG00000021547	rab33a	59	38.554
ENSACLG00000008615	-	74	30.120	ENSACLG00000008646	rheb	91	30.120
ENSACLG00000008615	-	88	40.000	ENSACLG00000019643	-	95	40.000
ENSACLG00000008615	-	76	43.103	ENSACLG00000024456	-	82	43.103
ENSACLG00000008615	-	74	36.145	ENSACLG00000022893	-	77	36.585
ENSACLG00000008615	-	73	47.205	ENSACLG00000005420	rab11ba	74	47.205
ENSACLG00000008615	-	77	31.443	ENSACLG00000010965	-	80	31.443
ENSACLG00000008615	-	53	30.328	ENSACLG00000013597	arl8ba	62	30.328
ENSACLG00000008615	-	79	42.308	ENSACLG00000011484	rab18a	89	42.308
ENSACLG00000008615	-	88	43.655	ENSACLG00000003326	-	96	43.655
ENSACLG00000008615	-	75	37.989	ENSACLG00000005720	rab33ba	75	37.989
ENSACLG00000008615	-	72	30.000	ENSACLG00000011249	rras	81	30.000
ENSACLG00000008615	-	100	86.937	ENSACLG00000002706	rab5c	96	88.208
ENSACLG00000008615	-	89	49.239	ENSACLG00000021470	rab22a	97	49.239
ENSACLG00000008615	-	74	42.941	ENSACLG00000024502	-	82	42.941
ENSACLG00000008615	-	75	41.317	ENSACLG00000018721	si:dkey-16l2.16	79	41.317
ENSACLG00000008615	-	75	38.372	ENSACLG00000007696	rab12	71	38.372
ENSACLG00000008615	-	74	37.349	ENSACLG00000009468	RAB39B	78	37.349
ENSACLG00000008615	-	90	41.951	ENSACLG00000010268	rab11al	95	41.951
ENSACLG00000008615	-	75	34.337	ENSACLG00000002819	rab23	73	36.047
ENSACLG00000008615	-	50	32.143	ENSACLG00000014417	RAP2B	94	33.600
ENSACLG00000008615	-	80	35.135	ENSACLG00000004795	rab9b	82	35.135
ENSACLG00000008615	-	88	40.816	ENSACLG00000010251	rab25b	94	40.816
ENSACLG00000008615	-	89	33.990	ENSACLG00000003898	rab32b	92	33.990
ENSACLG00000008615	-	77	42.353	ENSACLG00000006329	-	83	41.011
ENSACLG00000008615	-	99	82.648	ENSACLG00000018066	rab5aa	96	83.412
ENSACLG00000008615	-	74	34.682	ENSACLG00000006647	rab9a	84	34.682
ENSACLG00000008615	-	92	37.561	ENSACLG00000019423	rab41	82	43.023
ENSACLG00000008615	-	74	32.121	ENSACLG00000027515	KRAS	85	31.902

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000008615	-	99	88.584	ENSG00000108774	RAB5C	95	95.763	Homo_sapiens
ENSACLG00000008615	-	99	89.140	ENSAPOG00000016864	rab5c	95	90.521	Acanthochromis_polyacanthus
ENSACLG00000008615	-	99	88.584	ENSAMEG00000006003	RAB5C	96	89.100	Ailuropoda_melanoleuca
ENSACLG00000008615	-	100	87.838	ENSACIG00000010896	rab5c	98	88.732	Amphilophus_citrinellus
ENSACLG00000008615	-	99	89.140	ENSAOCG00000016614	rab5c	95	90.521	Amphiprion_ocellaris
ENSACLG00000008615	-	96	89.720	ENSAPEG00000017868	-	96	90.521	Amphiprion_percula
ENSACLG00000008615	-	99	89.091	ENSATEG00000001937	rab5c	96	90.476	Anabas_testudineus
ENSACLG00000008615	-	93	90.821	ENSANAG00000025390	RAB5C	97	91.457	Aotus_nancymaae
ENSACLG00000008615	-	100	88.789	ENSAMXG00000043717	rab5c	96	90.141	Astyanax_mexicanus
ENSACLG00000008615	-	95	89.100	ENSAMXG00000037267	-	99	89.100	Astyanax_mexicanus
ENSACLG00000008615	-	99	88.584	ENSBTAG00000006982	RAB5C	96	89.100	Bos_taurus
ENSACLG00000008615	-	99	74.439	WBGene00004268	rab-5	95	75.587	Caenorhabditis_elegans
ENSACLG00000008615	-	99	88.128	ENSCAFG00000015629	RAB5C	96	88.626	Canis_familiaris
ENSACLG00000008615	-	99	88.128	ENSCAFG00020013537	RAB5C	96	88.626	Canis_lupus_dingo
ENSACLG00000008615	-	99	88.584	ENSCHIG00000012960	RAB5C	96	89.100	Capra_hircus
ENSACLG00000008615	-	99	89.041	ENSTSYG00000030531	RAB5C	96	89.573	Carlito_syrichta
ENSACLG00000008615	-	99	88.584	ENSCCAG00000025940	RAB5C	96	89.100	Cebus_capucinus
ENSACLG00000008615	-	99	88.584	ENSCATG00000040873	RAB5C	96	89.100	Cercocebus_atys
ENSACLG00000008615	-	99	87.215	ENSCLAG00000016650	RAB5C	95	88.517	Chinchilla_lanigera
ENSACLG00000008615	-	81	94.444	ENSCHOG00000009886	RAB5C	97	95.930	Choloepus_hoffmanni
ENSACLG00000008615	-	97	75.814	ENSCING00000003340	-	97	75.701	Ciona_intestinalis
ENSACLG00000008615	-	95	76.037	ENSCSAVG00000000613	-	94	84.416	Ciona_savignyi
ENSACLG00000008615	-	99	88.584	ENSCGRG00001014226	Rab5c	96	89.100	Cricetulus_griseus_chok1gshd
ENSACLG00000008615	-	99	88.584	ENSCGRG00000007534	Rab5c	96	89.100	Cricetulus_griseus_crigri
ENSACLG00000008615	-	100	88.288	ENSCSEG00000017024	rab5c	96	89.623	Cynoglossus_semilaevis
ENSACLG00000008615	-	100	89.640	ENSCVAG00000009550	rab5c	96	91.038	Cyprinodon_variegatus
ENSACLG00000008615	-	99	89.041	ENSDNOG00000038853	RAB5C	96	89.573	Dasypus_novemcinctus
ENSACLG00000008615	-	99	89.041	ENSDORG00000006819	Rab5c	95	90.431	Dipodomys_ordii
ENSACLG00000008615	-	97	72.146	FBgn0014010	Rab5	93	72.558	Drosophila_melanogaster
ENSACLG00000008615	-	96	76.995	ENSEBUG00000014794	rab5c	96	77.512	Eptatretus_burgeri
ENSACLG00000008615	-	99	88.584	ENSEASG00005009281	RAB5C	96	89.100	Equus_asinus_asinus
ENSACLG00000008615	-	99	89.041	ENSECAG00000025054	RAB5C	96	89.573	Equus_caballus
ENSACLG00000008615	-	99	88.584	ENSEEUG00000002790	RAB5C	96	89.100	Erinaceus_europaeus
ENSACLG00000008615	-	99	88.128	ENSELUG00000018516	rab5c	96	89.474	Esox_lucius
ENSACLG00000008615	-	100	86.036	ENSELUG00000010439	-	96	87.264	Esox_lucius
ENSACLG00000008615	-	99	88.584	ENSFCAG00000002148	RAB5C	96	89.100	Felis_catus
ENSACLG00000008615	-	99	86.758	ENSFDAG00000021541	RAB5C	96	87.204	Fukomys_damarensis
ENSACLG00000008615	-	100	92.342	ENSFHEG00000015268	-	97	92.523	Fundulus_heteroclitus
ENSACLG00000008615	-	100	89.189	ENSFHEG00000012117	rab5c	96	90.566	Fundulus_heteroclitus
ENSACLG00000008615	-	100	87.838	ENSGMOG00000015096	rab5c	96	89.151	Gadus_morhua
ENSACLG00000008615	-	76	87.574	ENSGMOG00000001876	-	98	87.574	Gadus_morhua
ENSACLG00000008615	-	95	94.286	ENSGAFG00000003642	-	97	91.204	Gambusia_affinis
ENSACLG00000008615	-	100	88.288	ENSGAFG00000000884	rab5c	96	89.623	Gambusia_affinis
ENSACLG00000008615	-	99	85.455	ENSGACG00000008659	rab5c	95	86.667	Gasterosteus_aculeatus
ENSACLG00000008615	-	99	88.584	ENSGGOG00000005472	RAB5C	96	89.100	Gorilla_gorilla
ENSACLG00000008615	-	100	86.937	ENSHBUG00000002014	rab5c	96	88.208	Haplochromis_burtoni
ENSACLG00000008615	-	100	100.000	ENSHBUG00000006823	-	100	100.000	Haplochromis_burtoni
ENSACLG00000008615	-	99	87.671	ENSHGLG00000012067	RAB5C	96	88.152	Heterocephalus_glaber_female
ENSACLG00000008615	-	100	89.686	ENSHCOG00000004662	rab5c	95	91.080	Hippocampus_comes
ENSACLG00000008615	-	99	85.455	ENSHCOG00000020238	-	99	84.545	Hippocampus_comes
ENSACLG00000008615	-	96	85.981	ENSIPUG00000020082	rab5c	99	85.981	Ictalurus_punctatus
ENSACLG00000008615	-	99	88.584	ENSSTOG00000006620	RAB5C	96	89.100	Ictidomys_tridecemlineatus
ENSACLG00000008615	-	99	89.498	ENSJJAG00000021181	Rab5c	96	90.047	Jaculus_jaculus
ENSACLG00000008615	-	100	88.288	ENSKMAG00000020038	rab5c	96	89.623	Kryptolebias_marmoratus
ENSACLG00000008615	-	100	92.342	ENSKMAG00000017417	-	96	92.958	Kryptolebias_marmoratus
ENSACLG00000008615	-	100	90.991	ENSLBEG00000010408	-	95	91.943	Labrus_bergylta
ENSACLG00000008615	-	100	88.739	ENSLBEG00000004128	rab5c	96	90.094	Labrus_bergylta
ENSACLG00000008615	-	99	87.671	ENSLOCG00000012566	rab5c	96	88.995	Lepisosteus_oculatus
ENSACLG00000008615	-	99	88.584	ENSMFAG00000039627	RAB5C	97	89.100	Macaca_fascicularis
ENSACLG00000008615	-	99	88.584	ENSMNEG00000000355	RAB5C	96	89.100	Macaca_nemestrina
ENSACLG00000008615	-	100	87.387	ENSMAMG00000022322	rab5c	96	89.623	Mastacembelus_armatus
ENSACLG00000008615	-	100	91.441	ENSMAMG00000016207	-	96	91.981	Mastacembelus_armatus
ENSACLG00000008615	-	100	86.937	ENSMZEG00005022735	rab5c	96	88.208	Maylandia_zebra
ENSACLG00000008615	-	100	100.000	ENSMZEG00005021090	-	100	100.000	Maylandia_zebra
ENSACLG00000008615	-	99	89.041	ENSMAUG00000015005	Rab5c	96	89.573	Mesocricetus_auratus
ENSACLG00000008615	-	99	89.041	ENSMICG00000041608	RAB5C	96	89.573	Microcebus_murinus
ENSACLG00000008615	-	99	88.584	ENSMOCG00000018531	-	96	89.100	Microtus_ochrogaster
ENSACLG00000008615	-	99	89.091	ENSMMOG00000020621	rab5c	95	90.476	Mola_mola
ENSACLG00000008615	-	97	82.326	ENSMALG00000006052	rab5c	96	83.019	Monopterus_albus
ENSACLG00000008615	-	100	90.541	ENSMALG00000022348	-	96	91.509	Monopterus_albus
ENSACLG00000008615	-	99	89.498	MGP_CAROLIEiJ_G0017184	Rab5c	96	90.047	Mus_caroli
ENSACLG00000008615	-	99	89.498	ENSMUSG00000019173	Rab5c	96	90.047	Mus_musculus
ENSACLG00000008615	-	99	89.498	MGP_PahariEiJ_G0018314	Rab5c	96	90.047	Mus_pahari
ENSACLG00000008615	-	99	89.498	MGP_SPRETEiJ_G0018027	Rab5c	96	90.047	Mus_spretus
ENSACLG00000008615	-	99	88.584	ENSMPUG00000010554	RAB5C	96	89.100	Mustela_putorius_furo
ENSACLG00000008615	-	99	87.671	ENSNGAG00000010286	Rab5c	95	88.995	Nannospalax_galili
ENSACLG00000008615	-	100	100.000	ENSNBRG00000016922	-	100	100.000	Neolamprologus_brichardi
ENSACLG00000008615	-	100	87.838	ENSNBRG00000018165	rab5c	96	89.151	Neolamprologus_brichardi
ENSACLG00000008615	-	81	87.778	ENSOPRG00000008255	RAB5C	97	88.372	Ochotona_princeps
ENSACLG00000008615	-	99	86.758	ENSODEG00000017920	RAB5C	95	88.038	Octodon_degus
ENSACLG00000008615	-	100	88.288	ENSONIG00000001113	rab5c	96	89.623	Oreochromis_niloticus
ENSACLG00000008615	-	99	87.727	ENSORLG00000003882	rab5c	96	89.048	Oryzias_latipes
ENSACLG00000008615	-	99	87.727	ENSORLG00020008388	rab5c	96	89.048	Oryzias_latipes_hni
ENSACLG00000008615	-	99	87.727	ENSORLG00015021900	rab5c	96	89.048	Oryzias_latipes_hsok
ENSACLG00000008615	-	99	87.727	ENSOMEG00000023078	rab5c	96	89.048	Oryzias_melastigma
ENSACLG00000008615	-	99	88.584	ENSOGAG00000009456	RAB5C	95	89.952	Otolemur_garnettii
ENSACLG00000008615	-	99	88.584	ENSOARG00000018768	RAB5C	96	89.100	Ovis_aries
ENSACLG00000008615	-	99	88.584	ENSPPAG00000037206	RAB5C	96	89.100	Pan_paniscus
ENSACLG00000008615	-	99	88.584	ENSPPRG00000005745	RAB5C	96	89.100	Panthera_pardus
ENSACLG00000008615	-	99	88.584	ENSPTIG00000008177	RAB5C	96	89.100	Panthera_tigris_altaica
ENSACLG00000008615	-	99	88.584	ENSPTRG00000009194	RAB5C	97	89.100	Pan_troglodytes
ENSACLG00000008615	-	99	86.301	ENSPKIG00000001237	-	96	88.038	Paramormyrops_kingsleyae
ENSACLG00000008615	-	99	84.475	ENSPKIG00000020112	-	96	86.124	Paramormyrops_kingsleyae
ENSACLG00000008615	-	97	88.372	ENSPMGG00000010792	rab5c	98	89.151	Periophthalmus_magnuspinnatus
ENSACLG00000008615	-	99	88.584	ENSPEMG00000017971	Rab5c	96	89.100	Peromyscus_maniculatus_bairdii
ENSACLG00000008615	-	99	75.342	ENSPMAG00000007867	rab5c	97	76.303	Petromyzon_marinus
ENSACLG00000008615	-	99	76.339	ENSPMAG00000000008	rab5c	96	78.037	Petromyzon_marinus
ENSACLG00000008615	-	99	75.455	ENSPMAG00000001399	rab5c	97	76.777	Petromyzon_marinus
ENSACLG00000008615	-	99	87.215	ENSPCIG00000020225	-	96	88.152	Phascolarctos_cinereus
ENSACLG00000008615	-	100	88.288	ENSPLAG00000004790	rab5c	96	89.623	Poecilia_latipinna
ENSACLG00000008615	-	99	92.760	ENSPLAG00000016333	-	97	92.958	Poecilia_latipinna
ENSACLG00000008615	-	96	94.393	ENSPMEG00000012614	-	96	92.991	Poecilia_mexicana
ENSACLG00000008615	-	100	88.288	ENSPMEG00000011336	rab5c	96	89.623	Poecilia_mexicana
ENSACLG00000008615	-	86	94.737	ENSPREG00000022167	-	89	96.739	Poecilia_reticulata
ENSACLG00000008615	-	100	88.288	ENSPREG00000010146	rab5c	96	89.623	Poecilia_reticulata
ENSACLG00000008615	-	99	88.584	ENSPPYG00000008398	RAB5C	96	89.100	Pongo_abelii
ENSACLG00000008615	-	99	88.584	ENSPCAG00000016412	RAB5C	96	89.100	Procavia_capensis
ENSACLG00000008615	-	99	88.584	ENSPCOG00000026327	RAB5C	96	89.100	Propithecus_coquereli
ENSACLG00000008615	-	99	89.041	ENSPVAG00000003867	RAB5C	96	89.573	Pteropus_vampyrus
ENSACLG00000008615	-	100	86.937	ENSPNYG00000010615	rab5c	96	88.208	Pundamilia_nyererei
ENSACLG00000008615	-	100	100.000	ENSPNYG00000015851	-	100	100.000	Pundamilia_nyererei
ENSACLG00000008615	-	95	88.679	ENSPNAG00000002218	-	99	88.679	Pygocentrus_nattereri
ENSACLG00000008615	-	100	88.341	ENSPNAG00000028138	rab5c	96	89.671	Pygocentrus_nattereri
ENSACLG00000008615	-	99	89.041	ENSRNOG00000018568	Rab5c	96	89.573	Rattus_norvegicus
ENSACLG00000008615	-	99	88.584	ENSRBIG00000031376	RAB5C	96	89.100	Rhinopithecus_bieti
ENSACLG00000008615	-	99	88.584	ENSRROG00000032895	RAB5C	96	89.100	Rhinopithecus_roxellana
ENSACLG00000008615	-	99	88.584	ENSSBOG00000032552	-	96	89.100	Saimiri_boliviensis_boliviensis
ENSACLG00000008615	-	99	87.671	ENSSHAG00000005267	-	96	88.152	Sarcophilus_harrisii
ENSACLG00000008615	-	100	81.982	ENSSFOG00015009988	-	96	83.019	Scleropages_formosus
ENSACLG00000008615	-	95	89.100	ENSSMAG00000007323	rab5c	95	90.047	Scophthalmus_maximus
ENSACLG00000008615	-	100	88.288	ENSSDUG00000023008	rab5c	96	89.623	Seriola_dumerili
ENSACLG00000008615	-	100	87.387	ENSSLDG00000017771	rab5c	96	88.679	Seriola_lalandi_dorsalis
ENSACLG00000008615	-	99	87.671	ENSSPUG00000012950	-	96	88.152	Sphenodon_punctatus
ENSACLG00000008615	-	100	88.739	ENSSPAG00000006436	rab5c	96	90.094	Stegastes_partitus
ENSACLG00000008615	-	99	88.584	ENSSSCG00000032467	RAB5C	96	89.100	Sus_scrofa
ENSACLG00000008615	-	100	87.387	ENSTRUG00000015590	rab5c	96	88.679	Takifugu_rubripes
ENSACLG00000008615	-	99	86.878	ENSTNIG00000011711	rab5c	95	89.100	Tetraodon_nigroviridis
ENSACLG00000008615	-	99	88.584	ENSTBEG00000007092	RAB5C	96	89.100	Tupaia_belangeri
ENSACLG00000008615	-	99	88.584	ENSTTRG00000006673	RAB5C	96	89.100	Tursiops_truncatus
ENSACLG00000008615	-	99	88.584	ENSUAMG00000024343	RAB5C	96	89.100	Ursus_americanus
ENSACLG00000008615	-	99	88.584	ENSUMAG00000023270	RAB5C	96	89.100	Ursus_maritimus
ENSACLG00000008615	-	100	88.739	ENSXCOG00000016788	rab5c	99	90.094	Xiphophorus_couchianus
ENSACLG00000008615	-	95	95.714	ENSXCOG00000006300	-	97	92.130	Xiphophorus_couchianus
ENSACLG00000008615	-	100	88.288	ENSXMAG00000003266	rab5c	96	89.623	Xiphophorus_maculatus
ENSACLG00000008615	-	99	93.607	ENSXMAG00000022179	-	97	92.130	Xiphophorus_maculatus