EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000008638 (Gene tree)
Gene ID: 113024064
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 15220 bases
Position: chr6:17259119-17274338
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000012754	ResIII	PF04851.15	1.9e-08	1	1
ENSACLP00000012731	ResIII	PF04851.15	2.1e-08	1	1
ENSACLP00000012754	BRK	PF07533.16	6.9e-16	1	1
ENSACLP00000012731	BRK	PF07533.16	7.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000013047	-	4901	-	ENSACLP00000012731	1619 (aa)	-	-
ENSACLT00000013071	-	4503	-	ENSACLP00000012754	1500 (aa)	-	-

Gene Model

Click here to download ENSACLG00000008638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000008638's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000008638	-	98	85.134	ENSACLG00000000163	smarca4a	96	85.257
ENSACLG00000008638	-	98	73.779	ENSACLG00000004248	SMARCA2	91	74.685

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000008638	-	98	83.094	ENSG00000127616	SMARCA4	99	95.652	Homo_sapiens
ENSACLG00000008638	-	99	97.041	ENSAPOG00000004542	SMARCA4	99	97.041	Acanthochromis_polyacanthus
ENSACLG00000008638	-	78	88.627	ENSAPOG00000003509	smarca4a	93	88.851	Acanthochromis_polyacanthus
ENSACLG00000008638	-	98	80.616	ENSAMEG00000010868	SMARCA4	96	81.466	Ailuropoda_melanoleuca
ENSACLG00000008638	-	100	97.090	ENSACIG00000003035	-	99	97.090	Amphilophus_citrinellus
ENSACLG00000008638	-	98	84.258	ENSACIG00000021550	smarca4a	94	85.777	Amphilophus_citrinellus
ENSACLG00000008638	-	96	92.781	ENSAOCG00000009450	-	97	93.134	Amphiprion_ocellaris
ENSACLG00000008638	-	92	86.283	ENSAOCG00000019167	smarca4a	100	86.700	Amphiprion_ocellaris
ENSACLG00000008638	-	99	96.919	ENSAPEG00000023108	-	97	96.919	Amphiprion_percula
ENSACLG00000008638	-	92	86.354	ENSAPEG00000015559	smarca4a	100	86.771	Amphiprion_percula
ENSACLG00000008638	-	99	95.285	ENSATEG00000001094	-	96	95.285	Anabas_testudineus
ENSACLG00000008638	-	98	84.933	ENSATEG00000011524	smarca4a	95	85.625	Anabas_testudineus
ENSACLG00000008638	-	97	86.645	ENSANAG00000036991	SMARCA4	95	81.356	Aotus_nancymaae
ENSACLG00000008638	-	97	86.476	ENSAMXG00000011238	-	96	89.243	Astyanax_mexicanus
ENSACLG00000008638	-	98	86.892	ENSAMXG00000021023	smarca4a	96	86.680	Astyanax_mexicanus
ENSACLG00000008638	-	98	83.417	ENSBTAG00000019220	SMARCA4	95	84.173	Bos_taurus
ENSACLG00000008638	-	95	88.577	ENSCJAG00000005936	SMARCA4	95	81.477	Callithrix_jacchus
ENSACLG00000008638	-	98	83.281	ENSCAFG00000017584	SMARCA4	95	84.168	Canis_familiaris
ENSACLG00000008638	-	98	84.482	ENSCAFG00020024620	SMARCA4	96	83.135	Canis_lupus_dingo
ENSACLG00000008638	-	98	79.812	ENSCHIG00000015318	SMARCA4	95	80.405	Capra_hircus
ENSACLG00000008638	-	98	83.479	ENSTSYG00000012966	SMARCA4	95	84.369	Carlito_syrichta
ENSACLG00000008638	-	96	83.094	ENSCAPG00000015932	SMARCA4	94	88.841	Cavia_aperea
ENSACLG00000008638	-	98	83.448	ENSCPOG00000015549	SMARCA4	95	84.293	Cavia_porcellus
ENSACLG00000008638	-	98	80.961	ENSCCAG00000031660	SMARCA4	93	81.904	Cebus_capucinus
ENSACLG00000008638	-	97	86.615	ENSCATG00000029530	SMARCA4	95	84.043	Cercocebus_atys
ENSACLG00000008638	-	98	85.331	ENSCLAG00000011946	SMARCA4	95	84.872	Chinchilla_lanigera
ENSACLG00000008638	-	98	83.417	ENSCPBG00000009994	SMARCA4	95	84.101	Chrysemys_picta_bellii
ENSACLG00000008638	-	98	83.094	ENSCANG00000036013	SMARCA4	95	84.043	Colobus_angolensis_palliatus
ENSACLG00000008638	-	98	83.032	ENSCGRG00001016732	Smarca4	95	83.917	Cricetulus_griseus_chok1gshd
ENSACLG00000008638	-	98	83.032	ENSCGRG00000017242	Smarca4	95	83.917	Cricetulus_griseus_crigri
ENSACLG00000008638	-	94	83.099	ENSCSEG00000014771	smarca4a	95	84.519	Cynoglossus_semilaevis
ENSACLG00000008638	-	98	83.700	ENSCVAG00000006979	smarca4a	95	84.451	Cyprinodon_variegatus
ENSACLG00000008638	-	97	90.649	ENSCVAG00000003018	-	96	90.649	Cyprinodon_variegatus
ENSACLG00000008638	-	96	82.505	ENSDARG00000104339	SMARCA4	96	84.079	Danio_rerio
ENSACLG00000008638	-	98	86.658	ENSDARG00000077226	smarca4a	95	86.532	Danio_rerio
ENSACLG00000008638	-	94	84.314	ENSDNOG00000048847	SMARCA4	90	90.368	Dasypus_novemcinctus
ENSACLG00000008638	-	88	78.363	ENSDORG00000002544	Smarca4	91	78.888	Dipodomys_ordii
ENSACLG00000008638	-	96	76.489	ENSETEG00000013361	SMARCA4	94	73.638	Echinops_telfairi
ENSACLG00000008638	-	98	84.863	ENSEASG00005006167	SMARCA4	94	84.465	Equus_asinus_asinus
ENSACLG00000008638	-	98	83.157	ENSECAG00000008334	SMARCA4	95	83.980	Equus_caballus
ENSACLG00000008638	-	98	86.342	ENSELUG00000010247	smarca4a	94	85.762	Esox_lucius
ENSACLG00000008638	-	98	83.111	ENSELUG00000023232	-	94	85.505	Esox_lucius
ENSACLG00000008638	-	98	83.188	ENSFCAG00000004894	SMARCA4	95	84.072	Felis_catus
ENSACLG00000008638	-	95	80.052	ENSFALG00000004208	SMARCA4	95	81.675	Ficedula_albicollis
ENSACLG00000008638	-	95	83.204	ENSFDAG00000012237	SMARCA4	97	83.948	Fukomys_damarensis
ENSACLG00000008638	-	98	82.971	ENSFHEG00000010182	smarca4a	98	84.041	Fundulus_heteroclitus
ENSACLG00000008638	-	98	95.280	ENSFHEG00000007902	-	95	95.217	Fundulus_heteroclitus
ENSACLG00000008638	-	84	83.740	ENSGMOG00000002649	smarca4a	88	85.827	Gadus_morhua
ENSACLG00000008638	-	92	86.438	ENSGMOG00000005756	-	87	86.739	Gadus_morhua
ENSACLG00000008638	-	75	81.619	ENSGALG00000047145	SMARCA4	100	82.468	Gallus_gallus
ENSACLG00000008638	-	98	90.301	ENSGAFG00000008827	-	94	90.033	Gambusia_affinis
ENSACLG00000008638	-	83	91.091	ENSGAFG00000014900	smarca4a	94	86.613	Gambusia_affinis
ENSACLG00000008638	-	98	87.439	ENSGACG00000016033	-	96	87.377	Gasterosteus_aculeatus
ENSACLG00000008638	-	98	82.455	ENSGACG00000006691	smarca4a	95	83.072	Gasterosteus_aculeatus
ENSACLG00000008638	-	98	83.636	ENSGAGG00000016757	SMARCA4	95	84.330	Gopherus_agassizii
ENSACLG00000008638	-	97	85.649	ENSGGOG00000009882	SMARCA4	95	84.043	Gorilla_gorilla
ENSACLG00000008638	-	98	85.200	ENSHBUG00000021172	smarca4a	95	85.517	Haplochromis_burtoni
ENSACLG00000008638	-	100	98.943	ENSHBUG00000005447	-	100	98.943	Haplochromis_burtoni
ENSACLG00000008638	-	98	83.147	ENSHGLG00000010519	SMARCA4	95	83.738	Heterocephalus_glaber_female
ENSACLG00000008638	-	98	83.281	ENSHGLG00100013774	SMARCA4	95	83.812	Heterocephalus_glaber_male
ENSACLG00000008638	-	99	83.787	ENSHCOG00000009510	smarca4a	96	84.987	Hippocampus_comes
ENSACLG00000008638	-	98	85.504	ENSIPUG00000006107	smarca4a	97	85.332	Ictalurus_punctatus
ENSACLG00000008638	-	95	87.090	ENSIPUG00000016346	-	92	86.703	Ictalurus_punctatus
ENSACLG00000008638	-	98	83.157	ENSSTOG00000007939	SMARCA4	95	84.043	Ictidomys_tridecemlineatus
ENSACLG00000008638	-	98	82.154	ENSJJAG00000012877	Smarca4	95	83.086	Jaculus_jaculus
ENSACLG00000008638	-	98	85.197	ENSKMAG00000011931	smarca4a	95	85.507	Kryptolebias_marmoratus
ENSACLG00000008638	-	98	95.157	ENSKMAG00000019518	-	95	94.717	Kryptolebias_marmoratus
ENSACLG00000008638	-	100	83.301	ENSLBEG00000017383	smarca4a	97	83.191	Labrus_bergylta
ENSACLG00000008638	-	97	83.571	ENSLBEG00000020655	-	94	84.189	Labrus_bergylta
ENSACLG00000008638	-	54	77.010	ENSLACG00000015309	SMARCA4	100	77.123	Latimeria_chalumnae
ENSACLG00000008638	-	98	83.301	ENSLOCG00000007820	smarca4a	95	83.061	Lepisosteus_oculatus
ENSACLG00000008638	-	99	84.391	ENSLAFG00000001433	SMARCA4	95	84.010	Loxodonta_africana
ENSACLG00000008638	-	97	87.665	ENSMFAG00000032146	SMARCA4	94	84.043	Macaca_fascicularis
ENSACLG00000008638	-	98	83.094	ENSMMUG00000012042	SMARCA4	90	91.741	Macaca_mulatta
ENSACLG00000008638	-	97	86.615	ENSMNEG00000028512	SMARCA4	95	84.148	Macaca_nemestrina
ENSACLG00000008638	-	98	83.094	ENSMLEG00000034976	SMARCA4	95	83.823	Mandrillus_leucophaeus
ENSACLG00000008638	-	99	96.592	ENSMAMG00000002841	-	97	96.592	Mastacembelus_armatus
ENSACLG00000008638	-	98	85.023	ENSMAMG00000009256	smarca4a	94	90.132	Mastacembelus_armatus
ENSACLG00000008638	-	98	85.200	ENSMZEG00005003889	smarca4a	95	85.320	Maylandia_zebra
ENSACLG00000008638	-	100	99.321	ENSMZEG00005023861	-	100	99.321	Maylandia_zebra
ENSACLG00000008638	-	98	82.939	ENSMAUG00000020731	Smarca4	95	83.885	Mesocricetus_auratus
ENSACLG00000008638	-	98	83.126	ENSMICG00000009806	SMARCA4	95	84.010	Microcebus_murinus
ENSACLG00000008638	-	98	82.814	ENSMOCG00000022209	Smarca4	95	83.698	Microtus_ochrogaster
ENSACLG00000008638	-	98	93.460	ENSMMOG00000008466	-	94	93.256	Mola_mola
ENSACLG00000008638	-	99	82.174	ENSMMOG00000007571	smarca4a	98	83.774	Mola_mola
ENSACLG00000008638	-	97	88.732	ENSMODG00000006287	SMARCA4	95	83.313	Monodelphis_domestica
ENSACLG00000008638	-	92	96.157	ENSMALG00000021534	-	99	96.157	Monopterus_albus
ENSACLG00000008638	-	94	84.949	ENSMALG00000003388	smarca4a	95	85.364	Monopterus_albus
ENSACLG00000008638	-	98	82.907	MGP_CAROLIEiJ_G0031879	Smarca4	100	86.457	Mus_caroli
ENSACLG00000008638	-	98	82.907	ENSMUSG00000032187	Smarca4	99	86.457	Mus_musculus
ENSACLG00000008638	-	98	83.104	MGP_PahariEiJ_G0014745	Smarca4	100	86.482	Mus_pahari
ENSACLG00000008638	-	98	82.907	MGP_SPRETEiJ_G0033003	Smarca4	100	86.457	Mus_spretus
ENSACLG00000008638	-	98	83.219	ENSMPUG00000005711	SMARCA4	95	84.105	Mustela_putorius_furo
ENSACLG00000008638	-	98	83.219	ENSMLUG00000004491	-	95	84.168	Myotis_lucifugus
ENSACLG00000008638	-	98	83.521	ENSNGAG00000021852	Smarca4	95	83.814	Nannospalax_galili
ENSACLG00000008638	-	92	98.848	ENSNBRG00000018865	-	99	98.848	Neolamprologus_brichardi
ENSACLG00000008638	-	98	86.515	ENSNBRG00000011457	smarca4a	96	87.099	Neolamprologus_brichardi
ENSACLG00000008638	-	98	86.226	ENSNLEG00000012389	SMARCA4	95	81.550	Nomascus_leucogenys
ENSACLG00000008638	-	82	89.655	ENSOPRG00000000885	-	77	89.655	Ochotona_princeps
ENSACLG00000008638	-	98	85.452	ENSODEG00000017127	SMARCA4	95	84.823	Octodon_degus
ENSACLG00000008638	-	98	85.612	ENSONIG00000008196	smarca4a	95	85.374	Oreochromis_niloticus
ENSACLG00000008638	-	99	99.007	ENSONIG00000018040	-	97	99.007	Oreochromis_niloticus
ENSACLG00000008638	-	98	80.052	ENSOCUG00000001787	SMARCA4	95	79.921	Oryctolagus_cuniculus
ENSACLG00000008638	-	95	94.397	ENSORLG00000003955	-	98	91.361	Oryzias_latipes
ENSACLG00000008638	-	94	83.793	ENSORLG00000015452	smarca4a	95	84.379	Oryzias_latipes
ENSACLG00000008638	-	95	94.401	ENSORLG00020009728	-	98	91.655	Oryzias_latipes_hni
ENSACLG00000008638	-	94	83.726	ENSORLG00020004611	smarca4a	99	84.911	Oryzias_latipes_hni
ENSACLG00000008638	-	98	93.648	ENSORLG00015007739	-	95	93.962	Oryzias_latipes_hsok
ENSACLG00000008638	-	95	83.322	ENSORLG00015016560	smarca4a	95	84.253	Oryzias_latipes_hsok
ENSACLG00000008638	-	95	94.589	ENSOMEG00000016626	-	95	94.651	Oryzias_melastigma
ENSACLG00000008638	-	98	84.078	ENSOMEG00000007486	smarca4a	95	84.664	Oryzias_melastigma
ENSACLG00000008638	-	91	84.704	ENSOGAG00000016148	SMARCA4	100	81.734	Otolemur_garnettii
ENSACLG00000008638	-	98	83.052	ENSOARG00000017454	SMARCA4	92	84.092	Ovis_aries
ENSACLG00000008638	-	97	85.649	ENSPPAG00000043191	SMARCA4	95	84.043	Pan_paniscus
ENSACLG00000008638	-	98	83.188	ENSPPRG00000000064	SMARCA4	95	84.072	Panthera_pardus
ENSACLG00000008638	-	91	87.249	ENSPTIG00000017447	SMARCA4	95	79.298	Panthera_tigris_altaica
ENSACLG00000008638	-	97	85.649	ENSPTRG00000010488	SMARCA4	95	84.043	Pan_troglodytes
ENSACLG00000008638	-	97	86.615	ENSPANG00000011042	SMARCA4	94	84.211	Papio_anubis
ENSACLG00000008638	-	98	86.817	ENSPKIG00000007770	SMARCA4	95	86.730	Paramormyrops_kingsleyae
ENSACLG00000008638	-	94	86.004	ENSPKIG00000010087	-	92	85.920	Paramormyrops_kingsleyae
ENSACLG00000008638	-	83	87.490	ENSPSIG00000005547	SMARCA4	95	80.971	Pelodiscus_sinensis
ENSACLG00000008638	-	98	82.814	ENSPEMG00000020389	Smarca4	95	83.698	Peromyscus_maniculatus_bairdii
ENSACLG00000008638	-	97	91.011	ENSPCIG00000017138	SMARCA4	95	84.220	Phascolarctos_cinereus
ENSACLG00000008638	-	98	83.188	ENSPFOG00000007892	smarca4a	95	83.603	Poecilia_formosa
ENSACLG00000008638	-	98	94.340	ENSPFOG00000012930	-	95	94.906	Poecilia_formosa
ENSACLG00000008638	-	98	85.762	ENSPLAG00000014294	smarca4a	95	85.743	Poecilia_latipinna
ENSACLG00000008638	-	99	92.834	ENSPLAG00000018616	-	95	92.121	Poecilia_latipinna
ENSACLG00000008638	-	100	93.596	ENSPMEG00000008929	-	98	93.904	Poecilia_mexicana
ENSACLG00000008638	-	98	83.250	ENSPMEG00000003725	smarca4a	96	83.603	Poecilia_mexicana
ENSACLG00000008638	-	98	80.665	ENSPREG00000014608	smarca4a	96	85.348	Poecilia_reticulata
ENSACLG00000008638	-	100	94.455	ENSPREG00000014823	-	98	94.640	Poecilia_reticulata
ENSACLG00000008638	-	98	82.400	ENSPPYG00000009568	SMARCA4	95	83.025	Pongo_abelii
ENSACLG00000008638	-	78	90.110	ENSPCAG00000014054	SMARCA4	73	89.888	Procavia_capensis
ENSACLG00000008638	-	97	87.761	ENSPCOG00000023011	SMARCA4	95	83.885	Propithecus_coquereli
ENSACLG00000008638	-	78	93.333	ENSPVAG00000007787	SMARCA4	90	74.974	Pteropus_vampyrus
ENSACLG00000008638	-	100	97.820	ENSPNYG00000023995	-	100	97.820	Pundamilia_nyererei
ENSACLG00000008638	-	98	86.796	ENSPNYG00000000717	smarca4a	96	85.374	Pundamilia_nyererei
ENSACLG00000008638	-	98	87.006	ENSPNAG00000006636	-	93	87.183	Pygocentrus_nattereri
ENSACLG00000008638	-	98	86.532	ENSPNAG00000024136	smarca4a	94	86.590	Pygocentrus_nattereri
ENSACLG00000008638	-	98	82.969	ENSRNOG00000009271	Smarca4	95	83.855	Rattus_norvegicus
ENSACLG00000008638	-	98	83.032	ENSRBIG00000038696	SMARCA4	94	83.980	Rhinopithecus_bieti
ENSACLG00000008638	-	98	83.094	ENSRROG00000045509	SMARCA4	95	84.043	Rhinopithecus_roxellana
ENSACLG00000008638	-	97	87.394	ENSSBOG00000026896	SMARCA4	95	84.043	Saimiri_boliviensis_boliviensis
ENSACLG00000008638	-	97	90.931	ENSSHAG00000001642	SMARCA4	95	84.095	Sarcophilus_harrisii
ENSACLG00000008638	-	98	88.600	ENSSFOG00015013823	smarca4	93	88.652	Scleropages_formosus
ENSACLG00000008638	-	94	84.203	ENSSFOG00015009921	-	92	84.386	Scleropages_formosus
ENSACLG00000008638	-	98	92.308	ENSSMAG00000014082	-	98	92.677	Scophthalmus_maximus
ENSACLG00000008638	-	98	84.555	ENSSMAG00000003200	smarca4a	95	84.774	Scophthalmus_maximus
ENSACLG00000008638	-	98	81.027	ENSSDUG00000017298	smarca4a	95	79.662	Seriola_dumerili
ENSACLG00000008638	-	99	97.155	ENSSDUG00000005388	-	99	97.155	Seriola_dumerili
ENSACLG00000008638	-	98	93.054	ENSSLDG00000023663	-	99	93.358	Seriola_lalandi_dorsalis
ENSACLG00000008638	-	98	83.546	ENSSLDG00000024486	smarca4a	100	86.969	Seriola_lalandi_dorsalis
ENSACLG00000008638	-	62	97.516	ENSSARG00000013477	SMARCA4	77	97.516	Sorex_araneus
ENSACLG00000008638	-	98	80.726	ENSSPUG00000004558	SMARCA4	98	81.379	Sphenodon_punctatus
ENSACLG00000008638	-	98	86.200	ENSSPAG00000004248	smarca4a	95	86.564	Stegastes_partitus
ENSACLG00000008638	-	99	96.800	ENSSPAG00000012533	-	97	96.800	Stegastes_partitus
ENSACLG00000008638	-	98	83.250	ENSSSCG00000013629	SMARCA4	95	84.072	Sus_scrofa
ENSACLG00000008638	-	56	84.534	ENSTGUG00000015488	-	99	84.452	Taeniopygia_guttata
ENSACLG00000008638	-	98	91.745	ENSTRUG00000001378	SMARCA4	98	91.808	Takifugu_rubripes
ENSACLG00000008638	-	92	81.965	ENSTRUG00000004885	smarca4a	100	82.621	Takifugu_rubripes
ENSACLG00000008638	-	99	90.835	ENSTNIG00000004536	SMARCA4	95	91.394	Tetraodon_nigroviridis
ENSACLG00000008638	-	74	83.688	ENSTNIG00000004859	-	96	86.667	Tetraodon_nigroviridis
ENSACLG00000008638	-	52	98.649	ENSTBEG00000000707	-	52	98.571	Tupaia_belangeri
ENSACLG00000008638	-	98	81.801	ENSTTRG00000009519	SMARCA4	95	82.447	Tursiops_truncatus
ENSACLG00000008638	-	98	83.281	ENSUAMG00000014661	SMARCA4	95	84.168	Ursus_americanus
ENSACLG00000008638	-	94	90.159	ENSUMAG00000022005	SMARCA4	95	90.086	Ursus_maritimus
ENSACLG00000008638	-	98	83.281	ENSVVUG00000017820	SMARCA4	92	84.168	Vulpes_vulpes
ENSACLG00000008638	-	99	80.139	ENSXETG00000009355	smarca4	99	78.642	Xenopus_tropicalis
ENSACLG00000008638	-	99	94.779	ENSXCOG00000013494	-	96	94.779	Xiphophorus_couchianus
ENSACLG00000008638	-	98	82.658	ENSXMAG00000006321	smarca4a	100	84.713	Xiphophorus_maculatus
ENSACLG00000008638	-	98	94.210	ENSXMAG00000007030	-	95	94.588	Xiphophorus_maculatus