EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000008641 (Gene tree)
Gene ID: 113010109
Gene Symbol: gfi1aa
Alias: gfi1.1|gfi1a|zgc:113277
Full Name: zinc finger protein Gfi-1-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 2289 bases
Position: chr18:23816282-23818570
Accession: 113010109
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000012670	zf-C2H2	PF00096.26	2.9e-23	1	5
ENSACLP00000012670	zf-C2H2	PF00096.26	2.9e-23	2	5
ENSACLP00000012670	zf-C2H2	PF00096.26	2.9e-23	3	5
ENSACLP00000012670	zf-C2H2	PF00096.26	2.9e-23	4	5
ENSACLP00000012670	zf-C2H2	PF00096.26	2.9e-23	5	5
ENSACLP00000012670	zf-met	PF12874.7	3.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000012981	-	1194	-	ENSACLP00000012670	397 (aa)	XP_026004760	UPI000329DF75

Gene Model

Click here to download ENSACLG00000008641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000008641's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000008641	gfi1aa	60	45.033	ENSACLG00000024957	-	99	43.452
ENSACLG00000008641	gfi1aa	100	63.119	ENSACLG00000026458	gfi1ab	93	62.871
ENSACLG00000008641	gfi1aa	52	44.526	ENSACLG00000024459	-	89	45.000
ENSACLG00000008641	gfi1aa	53	42.466	ENSACLG00000006697	-	66	41.892
ENSACLG00000008641	gfi1aa	64	34.066	ENSACLG00000022287	-	60	34.066
ENSACLG00000008641	gfi1aa	55	47.024	ENSACLG00000011237	-	99	44.242
ENSACLG00000008641	gfi1aa	55	44.681	ENSACLG00000023963	-	91	44.681
ENSACLG00000008641	gfi1aa	53	42.286	ENSACLG00000020260	-	90	42.286
ENSACLG00000008641	gfi1aa	53	44.068	ENSACLG00000023513	-	88	43.038
ENSACLG00000008641	gfi1aa	63	43.452	ENSACLG00000006528	-	98	43.452
ENSACLG00000008641	gfi1aa	51	40.146	ENSACLG00000019094	-	91	40.146
ENSACLG00000008641	gfi1aa	54	40.146	ENSACLG00000016841	-	68	40.000
ENSACLG00000008641	gfi1aa	65	40.000	ENSACLG00000012712	znf646	50	40.000
ENSACLG00000008641	gfi1aa	51	45.370	ENSACLG00000019318	-	96	46.386
ENSACLG00000008641	gfi1aa	51	41.615	ENSACLG00000023941	-	86	42.236
ENSACLG00000008641	gfi1aa	60	41.176	ENSACLG00000005594	ZNF319	89	41.176
ENSACLG00000008641	gfi1aa	56	35.106	ENSACLG00000026187	-	73	35.106
ENSACLG00000008641	gfi1aa	61	36.441	ENSACLG00000018551	snai2	68	36.441
ENSACLG00000008641	gfi1aa	53	42.424	ENSACLG00000001507	-	78	42.424
ENSACLG00000008641	gfi1aa	56	45.000	ENSACLG00000021343	-	95	45.578
ENSACLG00000008641	gfi1aa	50	41.912	ENSACLG00000020579	znf319b	91	41.912
ENSACLG00000008641	gfi1aa	54	40.260	ENSACLG00000003546	-	73	40.260
ENSACLG00000008641	gfi1aa	51	44.853	ENSACLG00000024491	-	89	44.853
ENSACLG00000008641	gfi1aa	60	44.928	ENSACLG00000017321	-	88	46.341
ENSACLG00000008641	gfi1aa	53	41.892	ENSACLG00000020231	-	93	41.892
ENSACLG00000008641	gfi1aa	51	45.833	ENSACLG00000024308	-	98	45.833
ENSACLG00000008641	gfi1aa	54	41.071	ENSACLG00000005708	-	73	43.925
ENSACLG00000008641	gfi1aa	50	45.517	ENSACLG00000017336	-	93	45.517
ENSACLG00000008641	gfi1aa	55	43.195	ENSACLG00000025251	-	94	44.667
ENSACLG00000008641	gfi1aa	55	44.512	ENSACLG00000022383	-	95	45.455
ENSACLG00000008641	gfi1aa	51	43.885	ENSACLG00000013935	-	89	43.885
ENSACLG00000008641	gfi1aa	51	43.791	ENSACLG00000020474	-	94	43.791

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000008641	gfi1aa	100	90.226	ENSAPOG00000005043	gfi1aa	100	90.226	Acanthochromis_polyacanthus
ENSACLG00000008641	gfi1aa	100	91.709	ENSACIG00000021378	gfi1aa	100	91.709	Amphilophus_citrinellus
ENSACLG00000008641	gfi1aa	100	89.223	ENSAOCG00000022957	gfi1aa	100	89.223	Amphiprion_ocellaris
ENSACLG00000008641	gfi1aa	100	89.474	ENSAPEG00000014539	gfi1aa	100	89.474	Amphiprion_percula
ENSACLG00000008641	gfi1aa	100	84.250	ENSATEG00000019026	gfi1aa	100	87.018	Anabas_testudineus
ENSACLG00000008641	gfi1aa	100	62.750	ENSDARG00000020746	gfi1aa	100	62.750	Danio_rerio
ENSACLG00000008641	gfi1aa	100	95.970	ENSHBUG00000007389	gfi1aa	100	95.970	Haplochromis_burtoni
ENSACLG00000008641	gfi1aa	100	77.387	ENSKMAG00000002148	gfi1aa	100	77.638	Kryptolebias_marmoratus
ENSACLG00000008641	gfi1aa	100	79.302	ENSLBEG00000006603	gfi1aa	100	79.302	Labrus_bergylta
ENSACLG00000008641	gfi1aa	100	80.500	ENSMAMG00000004896	gfi1aa	100	80.750	Mastacembelus_armatus
ENSACLG00000008641	gfi1aa	100	100.000	ENSMZEG00005004578	gfi1aa	100	100.000	Maylandia_zebra
ENSACLG00000008641	gfi1aa	83	77.891	ENSMMOG00000006167	gfi1aa	99	77.891	Mola_mola
ENSACLG00000008641	gfi1aa	100	99.748	ENSNBRG00000002673	gfi1aa	100	99.748	Neolamprologus_brichardi
ENSACLG00000008641	gfi1aa	100	96.725	ENSPNYG00000002189	gfi1aa	100	96.725	Pundamilia_nyererei
ENSACLG00000008641	gfi1aa	100	80.296	ENSSMAG00000006797	gfi1aa	100	80.788	Scophthalmus_maximus
ENSACLG00000008641	gfi1aa	100	86.070	ENSSDUG00000011654	gfi1aa	100	86.070	Seriola_dumerili
ENSACLG00000008641	gfi1aa	100	82.836	ENSSLDG00000016512	gfi1aa	100	82.836	Seriola_lalandi_dorsalis
ENSACLG00000008641	gfi1aa	85	87.097	ENSSPAG00000000927	gfi1aa	94	87.097	Stegastes_partitus
ENSACLG00000008641	gfi1aa	100	78.055	ENSTRUG00000004744	gfi1aa	100	78.055	Takifugu_rubripes