EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000008976 (Gene tree)
Gene ID: 113014092
Gene Symbol: -
Alias: -
Full Name: RNA-binding motif%2C single-stranded-interacting protein 3
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 292641 bases
Position: chr22:11290030-11582670
Accession: 113014092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000013170	RRM_1	PF00076.22	3.9e-31	1	2
ENSACLP00000013170	RRM_1	PF00076.22	3.9e-31	2	2
ENSACLP00000013147	RRM_1	PF00076.22	6.6e-31	1	2
ENSACLP00000013147	RRM_1	PF00076.22	6.6e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000013499	-	1395	-	ENSACLP00000013170	464 (aa)	-	-
ENSACLT00000013476	-	2052	-	ENSACLP00000013147	527 (aa)	XP_026011175	UPI000329E092

Gene Model

Click here to download ENSACLG00000008976's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000008976's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000008976	-	89	63.270	ENSACLG00000006706	rbms2b	87	71.314
ENSACLG00000008976	-	73	55.030	ENSACLG00000021512	rbms1a	86	62.745
ENSACLG00000008976	-	83	68.217	ENSACLG00000002393	rbms2a	97	72.703
ENSACLG00000008976	-	94	74.888	ENSACLG00000018506	rbms3	95	83.871
ENSACLG00000008976	-	87	61.650	ENSACLG00000013048	RBMS1	87	71.893

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000008976	-	94	82.844	ENSG00000144642	RBMS3	94	90.361	Homo_sapiens
ENSACLG00000008976	-	94	67.917	ENSAPOG00000007266	rbms3	99	68.542	Acanthochromis_polyacanthus
ENSACLG00000008976	-	100	94.318	ENSAPOG00000003432	-	100	94.129	Acanthochromis_polyacanthus
ENSACLG00000008976	-	66	80.968	ENSAMEG00000005947	RBMS3	99	84.488	Ailuropoda_melanoleuca
ENSACLG00000008976	-	60	98.433	ENSACIG00000006987	-	87	98.433	Amphilophus_citrinellus
ENSACLG00000008976	-	83	66.753	ENSACIG00000021113	RBMS3	95	74.795	Amphilophus_citrinellus
ENSACLG00000008976	-	94	75.278	ENSAOCG00000021274	rbms3	99	75.278	Amphiprion_ocellaris
ENSACLG00000008976	-	100	94.318	ENSAOCG00000024104	-	100	94.129	Amphiprion_ocellaris
ENSACLG00000008976	-	78	74.933	ENSAPEG00000016299	rbms3	87	86.446	Amphiprion_percula
ENSACLG00000008976	-	94	86.758	ENSAPEG00000009481	-	100	86.758	Amphiprion_percula
ENSACLG00000008976	-	94	75.615	ENSATEG00000024295	rbms3	99	76.063	Anabas_testudineus
ENSACLG00000008976	-	100	90.341	ENSATEG00000008433	-	100	90.205	Anabas_testudineus
ENSACLG00000008976	-	94	81.859	ENSAPLG00000012270	RBMS3	99	80.272	Anas_platyrhynchos
ENSACLG00000008976	-	94	81.179	ENSACAG00000028664	RBMS3	99	81.179	Anolis_carolinensis
ENSACLG00000008976	-	94	82.844	ENSANAG00000021899	RBMS3	99	82.844	Aotus_nancymaae
ENSACLG00000008976	-	53	87.705	ENSAMXG00000043770	-	95	87.705	Astyanax_mexicanus
ENSACLG00000008976	-	94	83.066	ENSAMXG00000020388	rbms3	99	83.066	Astyanax_mexicanus
ENSACLG00000008976	-	94	82.844	ENSBTAG00000044062	RBMS3	96	85.861	Bos_taurus
ENSACLG00000008976	-	94	82.844	ENSCJAG00000004312	RBMS3	99	82.844	Callithrix_jacchus
ENSACLG00000008976	-	94	82.844	ENSCAFG00000005464	RBMS3	99	82.844	Canis_familiaris
ENSACLG00000008976	-	94	82.844	ENSCAFG00020024980	RBMS3	99	82.844	Canis_lupus_dingo
ENSACLG00000008976	-	94	82.844	ENSCHIG00000009144	RBMS3	99	82.844	Capra_hircus
ENSACLG00000008976	-	73	82.059	ENSTSYG00000002615	RBMS3	99	86.061	Carlito_syrichta
ENSACLG00000008976	-	83	79.692	ENSCAPG00000017783	RBMS3	95	82.842	Cavia_aperea
ENSACLG00000008976	-	94	83.105	ENSCPOG00000006457	RBMS3	99	83.105	Cavia_porcellus
ENSACLG00000008976	-	94	82.844	ENSCCAG00000008671	RBMS3	99	82.844	Cebus_capucinus
ENSACLG00000008976	-	94	82.511	ENSCATG00000013222	RBMS3	99	82.511	Cercocebus_atys
ENSACLG00000008976	-	94	82.393	ENSCLAG00000005866	RBMS3	99	82.393	Chinchilla_lanigera
ENSACLG00000008976	-	63	78.082	ENSCSAG00000009655	RBMS3	99	88.148	Chlorocebus_sabaeus
ENSACLG00000008976	-	83	88.000	ENSCHOG00000000758	RBMS3	86	88.000	Choloepus_hoffmanni
ENSACLG00000008976	-	94	81.406	ENSCPBG00000022678	RBMS3	99	81.406	Chrysemys_picta_bellii
ENSACLG00000008976	-	94	82.619	ENSCANG00000032137	RBMS3	99	82.619	Colobus_angolensis_palliatus
ENSACLG00000008976	-	94	81.507	ENSCGRG00001007243	Rbms3	95	86.216	Cricetulus_griseus_chok1gshd
ENSACLG00000008976	-	94	81.507	ENSCGRG00000004599	Rbms3	95	86.216	Cricetulus_griseus_crigri
ENSACLG00000008976	-	100	87.121	ENSCSEG00000014677	-	95	99.184	Cynoglossus_semilaevis
ENSACLG00000008976	-	94	75.000	ENSCSEG00000010011	RBMS3	99	75.446	Cynoglossus_semilaevis
ENSACLG00000008976	-	94	76.072	ENSCVAG00000022354	rbms3	99	76.298	Cyprinodon_variegatus
ENSACLG00000008976	-	94	89.773	ENSCVAG00000022814	-	100	98.433	Cyprinodon_variegatus
ENSACLG00000008976	-	94	82.609	ENSDARG00000044574	rbms3	95	94.891	Danio_rerio
ENSACLG00000008976	-	98	80.435	ENSDNOG00000016645	RBMS3	99	82.619	Dasypus_novemcinctus
ENSACLG00000008976	-	94	81.716	ENSDORG00000007220	Rbms3	99	81.716	Dipodomys_ordii
ENSACLG00000008976	-	82	83.333	ENSETEG00000009485	-	80	70.571	Echinops_telfairi
ENSACLG00000008976	-	61	53.684	ENSEBUG00000005830	rbms3	86	55.472	Eptatretus_burgeri
ENSACLG00000008976	-	94	81.674	ENSEASG00005006152	RBMS3	99	81.674	Equus_asinus_asinus
ENSACLG00000008976	-	94	82.619	ENSECAG00000017871	RBMS3	99	82.619	Equus_caballus
ENSACLG00000008976	-	85	76.675	ENSEEUG00000014337	RBMS3	100	76.675	Erinaceus_europaeus
ENSACLG00000008976	-	94	73.318	ENSELUG00000002862	rbms3	94	82.289	Esox_lucius
ENSACLG00000008976	-	92	81.762	ENSELUG00000006905	-	98	97.942	Esox_lucius
ENSACLG00000008976	-	94	82.393	ENSFCAG00000002130	RBMS3	99	82.393	Felis_catus
ENSACLG00000008976	-	94	81.633	ENSFALG00000009165	RBMS3	99	81.633	Ficedula_albicollis
ENSACLG00000008976	-	94	81.941	ENSFDAG00000008278	RBMS3	99	81.941	Fukomys_damarensis
ENSACLG00000008976	-	83	70.951	ENSFHEG00000004787	RBMS3	94	75.749	Fundulus_heteroclitus
ENSACLG00000008976	-	85	83.871	ENSGMOG00000002600	-	96	88.917	Gadus_morhua
ENSACLG00000008976	-	94	81.633	ENSGALG00000011439	RBMS3	99	81.633	Gallus_gallus
ENSACLG00000008976	-	94	75.901	ENSGAFG00000000168	rbms3	95	84.011	Gambusia_affinis
ENSACLG00000008976	-	100	89.603	ENSGAFG00000003329	-	100	90.000	Gambusia_affinis
ENSACLG00000008976	-	63	77.133	ENSGAGG00000004039	RBMS3	99	87.085	Gopherus_agassizii
ENSACLG00000008976	-	94	82.844	ENSGGOG00000007228	RBMS3	99	82.844	Gorilla_gorilla
ENSACLG00000008976	-	100	99.810	ENSHBUG00000019785	-	100	99.810	Haplochromis_burtoni
ENSACLG00000008976	-	52	86.800	ENSHBUG00000021196	rbms3	87	86.800	Haplochromis_burtoni
ENSACLG00000008976	-	94	82.393	ENSHGLG00000002170	RBMS3	99	82.393	Heterocephalus_glaber_female
ENSACLG00000008976	-	94	82.393	ENSHGLG00100014278	RBMS3	99	82.393	Heterocephalus_glaber_male
ENSACLG00000008976	-	94	88.636	ENSHCOG00000007894	-	98	96.939	Hippocampus_comes
ENSACLG00000008976	-	94	83.066	ENSIPUG00000017680	rbms3	99	83.066	Ictalurus_punctatus
ENSACLG00000008976	-	94	82.844	ENSSTOG00000006324	RBMS3	99	82.844	Ictidomys_tridecemlineatus
ENSACLG00000008976	-	94	79.233	ENSJJAG00000014708	Rbms3	99	79.458	Jaculus_jaculus
ENSACLG00000008976	-	94	74.667	ENSKMAG00000020500	rbms3	99	74.667	Kryptolebias_marmoratus
ENSACLG00000008976	-	100	92.235	ENSKMAG00000012586	-	100	92.235	Kryptolebias_marmoratus
ENSACLG00000008976	-	100	88.447	ENSLBEG00000027388	-	98	97.067	Labrus_bergylta
ENSACLG00000008976	-	59	66.084	ENSLBEG00000006677	rbms3	97	74.242	Labrus_bergylta
ENSACLG00000008976	-	94	83.182	ENSLACG00000010581	RBMS3	99	83.182	Latimeria_chalumnae
ENSACLG00000008976	-	67	79.808	ENSLOCG00000002328	rbms3	99	91.003	Lepisosteus_oculatus
ENSACLG00000008976	-	94	82.619	ENSLAFG00000000354	RBMS3	99	82.619	Loxodonta_africana
ENSACLG00000008976	-	94	82.619	ENSMFAG00000033300	RBMS3	99	82.619	Macaca_fascicularis
ENSACLG00000008976	-	94	81.674	ENSMMUG00000004404	RBMS3	99	81.674	Macaca_mulatta
ENSACLG00000008976	-	94	82.619	ENSMNEG00000035839	RBMS3	99	82.619	Macaca_nemestrina
ENSACLG00000008976	-	94	82.511	ENSMLEG00000029464	RBMS3	99	82.511	Mandrillus_leucophaeus
ENSACLG00000008976	-	100	91.098	ENSMAMG00000002176	-	100	98.210	Mastacembelus_armatus
ENSACLG00000008976	-	94	75.893	ENSMAMG00000024043	rbms3	99	77.009	Mastacembelus_armatus
ENSACLG00000008976	-	100	100.000	ENSMZEG00005026469	-	100	100.000	Maylandia_zebra
ENSACLG00000008976	-	94	74.888	ENSMZEG00005006308	rbms3	99	75.336	Maylandia_zebra
ENSACLG00000008976	-	94	81.507	ENSMAUG00000016436	Rbms3	95	86.216	Mesocricetus_auratus
ENSACLG00000008976	-	94	83.070	ENSMICG00000049249	RBMS3	99	83.070	Microcebus_murinus
ENSACLG00000008976	-	94	81.050	ENSMOCG00000006997	Rbms3	95	85.965	Microtus_ochrogaster
ENSACLG00000008976	-	94	88.383	ENSMMOG00000015071	-	98	93.873	Mola_mola
ENSACLG00000008976	-	78	75.335	ENSMMOG00000008471	RBMS3	89	87.234	Mola_mola
ENSACLG00000008976	-	94	78.146	ENSMODG00000015125	RBMS3	99	77.263	Monodelphis_domestica
ENSACLG00000008976	-	100	89.773	ENSMALG00000009155	-	100	89.749	Monopterus_albus
ENSACLG00000008976	-	94	75.446	ENSMALG00000019536	RBMS3	99	73.826	Monopterus_albus
ENSACLG00000008976	-	94	80.594	MGP_CAROLIEiJ_G0032783	Rbms3	100	90.338	Mus_caroli
ENSACLG00000008976	-	94	81.279	ENSMUSG00000039607	Rbms3	100	91.787	Mus_musculus
ENSACLG00000008976	-	94	81.093	MGP_PahariEiJ_G0015650	Rbms3	100	91.787	Mus_pahari
ENSACLG00000008976	-	94	81.279	MGP_SPRETEiJ_G0033930	Rbms3	100	91.787	Mus_spretus
ENSACLG00000008976	-	94	82.844	ENSMPUG00000011956	RBMS3	99	82.844	Mustela_putorius_furo
ENSACLG00000008976	-	94	81.674	ENSMLUG00000000659	RBMS3	99	81.674	Myotis_lucifugus
ENSACLG00000008976	-	94	82.877	ENSNGAG00000014039	Rbms3	99	82.877	Nannospalax_galili
ENSACLG00000008976	-	94	91.096	ENSNBRG00000018065	-	98	96.806	Neolamprologus_brichardi
ENSACLG00000008976	-	94	82.844	ENSNLEG00000004129	RBMS3	99	82.844	Nomascus_leucogenys
ENSACLG00000008976	-	94	74.718	ENSMEUG00000004772	RBMS3	99	74.718	Notamacropus_eugenii
ENSACLG00000008976	-	94	82.619	ENSOPRG00000006808	RBMS3	85	82.393	Ochotona_princeps
ENSACLG00000008976	-	94	82.844	ENSODEG00000003651	RBMS3	99	82.844	Octodon_degus
ENSACLG00000008976	-	94	69.977	ENSONIG00000007172	rbms3	90	83.871	Oreochromis_niloticus
ENSACLG00000008976	-	94	82.127	ENSOANG00000010529	RBMS3	99	82.127	Ornithorhynchus_anatinus
ENSACLG00000008976	-	94	82.393	ENSOCUG00000004840	RBMS3	99	82.393	Oryctolagus_cuniculus
ENSACLG00000008976	-	94	74.550	ENSORLG00000005370	RBMS3	99	74.324	Oryzias_latipes
ENSACLG00000008976	-	100	86.553	ENSORLG00000002306	-	100	88.838	Oryzias_latipes
ENSACLG00000008976	-	100	85.985	ENSORLG00020008496	-	96	96.491	Oryzias_latipes_hni
ENSACLG00000008976	-	94	74.324	ENSORLG00020022674	RBMS3	86	88.152	Oryzias_latipes_hni
ENSACLG00000008976	-	94	89.066	ENSORLG00015015719	-	100	89.066	Oryzias_latipes_hsok
ENSACLG00000008976	-	94	74.775	ENSORLG00015005509	rbms3	86	88.152	Oryzias_latipes_hsok
ENSACLG00000008976	-	94	75.225	ENSOMEG00000014805	RBMS3	95	82.796	Oryzias_melastigma
ENSACLG00000008976	-	100	85.417	ENSOMEG00000007677	-	100	97.120	Oryzias_melastigma
ENSACLG00000008976	-	94	82.393	ENSOARG00000014684	RBMS3	99	82.393	Ovis_aries
ENSACLG00000008976	-	94	82.844	ENSPPAG00000036519	RBMS3	99	82.844	Pan_paniscus
ENSACLG00000008976	-	94	82.167	ENSPPRG00000002761	RBMS3	99	82.167	Panthera_pardus
ENSACLG00000008976	-	94	82.167	ENSPTIG00000011568	RBMS3	99	82.167	Panthera_tigris_altaica
ENSACLG00000008976	-	94	82.844	ENSPTRG00000014709	RBMS3	99	82.844	Pan_troglodytes
ENSACLG00000008976	-	94	82.511	ENSPANG00000010234	RBMS3	100	80.132	Papio_anubis
ENSACLG00000008976	-	52	93.776	ENSPKIG00000007989	-	94	93.776	Paramormyrops_kingsleyae
ENSACLG00000008976	-	94	80.952	ENSPSIG00000005269	RBMS3	99	80.952	Pelodiscus_sinensis
ENSACLG00000008976	-	87	88.642	ENSPMGG00000021683	-	100	97.906	Periophthalmus_magnuspinnatus
ENSACLG00000008976	-	78	75.472	ENSPMGG00000021544	rbms3	86	85.542	Periophthalmus_magnuspinnatus
ENSACLG00000008976	-	94	80.594	ENSPEMG00000001117	Rbms3	99	80.594	Peromyscus_maniculatus_bairdii
ENSACLG00000008976	-	75	85.154	ENSPCIG00000006106	RBMS3	89	89.720	Phascolarctos_cinereus
ENSACLG00000008976	-	94	76.351	ENSPFOG00000017887	rbms3	99	76.577	Poecilia_formosa
ENSACLG00000008976	-	73	72.911	ENSPLAG00000016866	-	82	81.308	Poecilia_latipinna
ENSACLG00000008976	-	100	88.847	ENSPMEG00000002993	-	100	90.000	Poecilia_mexicana
ENSACLG00000008976	-	94	74.607	ENSPREG00000011880	rbms3	92	84.367	Poecilia_reticulata
ENSACLG00000008976	-	100	89.225	ENSPREG00000018221	-	94	100.000	Poecilia_reticulata
ENSACLG00000008976	-	94	69.977	ENSPPYG00000014050	RBMS3	82	69.977	Pongo_abelii
ENSACLG00000008976	-	79	75.403	ENSPCAG00000006307	RBMS3	84	75.403	Procavia_capensis
ENSACLG00000008976	-	94	83.070	ENSPCOG00000017136	RBMS3	99	83.070	Propithecus_coquereli
ENSACLG00000008976	-	84	88.000	ENSPVAG00000014037	RBMS3	99	73.815	Pteropus_vampyrus
ENSACLG00000008976	-	94	74.664	ENSPNYG00000010546	rbms3	99	75.112	Pundamilia_nyererei
ENSACLG00000008976	-	94	100.000	ENSPNYG00000012624	-	100	100.000	Pundamilia_nyererei
ENSACLG00000008976	-	94	83.066	ENSPNAG00000001800	rbms3	99	83.066	Pygocentrus_nattereri
ENSACLG00000008976	-	94	81.507	ENSRNOG00000025881	Rbms3	99	81.507	Rattus_norvegicus
ENSACLG00000008976	-	94	82.393	ENSRBIG00000035863	RBMS3	99	82.393	Rhinopithecus_bieti
ENSACLG00000008976	-	83	83.548	ENSRROG00000027512	RBMS3	94	86.010	Rhinopithecus_roxellana
ENSACLG00000008976	-	94	82.844	ENSSBOG00000020232	RBMS3	99	82.844	Saimiri_boliviensis_boliviensis
ENSACLG00000008976	-	83	75.515	ENSSHAG00000002411	RBMS3	95	81.720	Sarcophilus_harrisii
ENSACLG00000008976	-	94	86.333	ENSSFOG00015008578	rbms3	98	94.133	Scleropages_formosus
ENSACLG00000008976	-	94	73.274	ENSSMAG00000004997	rbms3	99	83.333	Scophthalmus_maximus
ENSACLG00000008976	-	91	85.176	ENSSMAG00000020065	-	97	92.935	Scophthalmus_maximus
ENSACLG00000008976	-	100	93.561	ENSSDUG00000019287	-	100	93.371	Seriola_dumerili
ENSACLG00000008976	-	94	75.670	ENSSDUG00000013656	RBMS3	99	76.116	Seriola_dumerili
ENSACLG00000008976	-	94	75.388	ENSSLDG00000020276	RBMS3	99	75.831	Seriola_lalandi_dorsalis
ENSACLG00000008976	-	100	93.371	ENSSLDG00000013224	-	100	93.182	Seriola_lalandi_dorsalis
ENSACLG00000008976	-	60	94.872	ENSSARG00000000695	RBMS3	77	92.574	Sorex_araneus
ENSACLG00000008976	-	67	77.389	ENSSPUG00000017197	RBMS3	97	85.185	Sphenodon_punctatus
ENSACLG00000008976	-	100	93.019	ENSSPAG00000003983	-	100	93.774	Stegastes_partitus
ENSACLG00000008976	-	99	72.632	ENSSPAG00000020693	rbms3	92	86.310	Stegastes_partitus
ENSACLG00000008976	-	94	82.393	ENSSSCG00000036381	RBMS3	99	82.393	Sus_scrofa
ENSACLG00000008976	-	73	80.588	ENSTGUG00000003572	RBMS3	99	84.685	Taeniopygia_guttata
ENSACLG00000008976	-	94	78.153	ENSTRUG00000007482	-	89	92.244	Takifugu_rubripes
ENSACLG00000008976	-	94	73.884	ENSTRUG00000021719	RBMS3	99	73.884	Takifugu_rubripes
ENSACLG00000008976	-	75	83.908	ENSTBEG00000005362	RBMS3	94	87.106	Tupaia_belangeri
ENSACLG00000008976	-	94	82.167	ENSTTRG00000006202	RBMS3	99	82.167	Tursiops_truncatus
ENSACLG00000008976	-	94	82.844	ENSUMAG00000000263	RBMS3	99	82.844	Ursus_maritimus
ENSACLG00000008976	-	83	73.779	ENSVPAG00000003842	RBMS3	94	75.578	Vicugna_pacos
ENSACLG00000008976	-	83	84.062	ENSVVUG00000004660	RBMS3	94	92.202	Vulpes_vulpes
ENSACLG00000008976	-	67	77.955	ENSXETG00000032055	RBMS3	98	81.759	Xenopus_tropicalis
ENSACLG00000008976	-	87	76.108	ENSXCOG00000019600	-	100	82.776	Xiphophorus_couchianus
ENSACLG00000008976	-	94	74.157	ENSXMAG00000021783	rbms3	99	74.382	Xiphophorus_maculatus
ENSACLG00000008976	-	100	89.981	ENSXMAG00000014382	-	100	90.227	Xiphophorus_maculatus