EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000008978 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 2254 bases
Position: chr2:4618776-4621029
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000013161	RRM_1	PF00076.22	1e-32	1	2
ENSACLP00000013161	RRM_1	PF00076.22	1e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000013490	-	657	-	ENSACLP00000013161	218 (aa)	-	-

Gene Model

Click here to download ENSACLG00000008978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000008978's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000008978	-	87	38.547	ENSACLG00000007752	msi2a	55	37.791
ENSACLG00000008978	-	90	40.314	ENSACLG00000011230	MSI1	58	38.286
ENSACLG00000008978	-	84	64.481	ENSACLG00000008973	HNRNPA0	57	64.641
ENSACLG00000008978	-	92	52.358	ENSACLG00000006940	-	53	56.742
ENSACLG00000008978	-	90	41.361	ENSACLG00000000117	-	53	39.655
ENSACLG00000008978	-	91	37.037	ENSACLG00000023187	dazap1	51	35.326
ENSACLG00000008978	-	78	31.548	ENSACLG00000024791	pabpc1l	50	31.548
ENSACLG00000008978	-	89	37.438	ENSACLG00000025213	hnrnpd	52	38.012
ENSACLG00000008978	-	78	37.059	ENSACLG00000007827	hnrnpaba	58	37.059
ENSACLG00000008978	-	93	49.754	ENSACLG00000008532	hnrnpa3	53	53.672
ENSACLG00000008978	-	89	36.634	ENSACLG00000026497	hnrnpd	63	37.647
ENSACLG00000008978	-	78	38.235	ENSACLG00000024583	-	63	38.235

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000008978	-	81	75.155	ENSAOCG00000015951	-	96	75.155	Amphiprion_ocellaris
ENSACLG00000008978	-	89	93.846	ENSAOCG00000015914	-	69	94.301	Amphiprion_ocellaris
ENSACLG00000008978	-	81	75.155	ENSAPEG00000002274	-	96	75.155	Amphiprion_percula
ENSACLG00000008978	-	89	93.846	ENSAPEG00000002224	-	81	94.301	Amphiprion_percula
ENSACLG00000008978	-	89	89.231	ENSCVAG00000008324	-	83	90.155	Cyprinodon_variegatus
ENSACLG00000008978	-	81	37.086	ENSEBUG00000010003	-	80	37.086	Eptatretus_burgeri
ENSACLG00000008978	-	81	75.152	ENSELUG00000014407	-	98	75.152	Esox_lucius
ENSACLG00000008978	-	100	100.000	ENSHBUG00000023867	-	100	100.000	Haplochromis_burtoni
ENSACLG00000008978	-	82	78.771	ENSHCOG00000007180	-	76	78.771	Hippocampus_comes
ENSACLG00000008978	-	81	87.349	ENSLBEG00000006362	-	79	87.349	Labrus_bergylta
ENSACLG00000008978	-	74	74.107	ENSLOCG00000012121	-	65	74.107	Lepisosteus_oculatus
ENSACLG00000008978	-	89	93.299	ENSMAMG00000017728	-	73	93.782	Mastacembelus_armatus
ENSACLG00000008978	-	83	100.000	ENSMZEG00005001063	-	82	100.000	Maylandia_zebra
ENSACLG00000008978	-	81	72.840	ENSMMOG00000004242	-	98	72.840	Mola_mola
ENSACLG00000008978	-	94	39.640	ENSMEUG00000003051	-	57	42.778	Notamacropus_eugenii
ENSACLG00000008978	-	83	61.798	ENSORLG00000023176	-	58	63.006	Oryzias_latipes
ENSACLG00000008978	-	96	56.818	ENSORLG00000030284	-	63	56.818	Oryzias_latipes
ENSACLG00000008978	-	83	61.453	ENSORLG00000023542	-	61	62.644	Oryzias_latipes
ENSACLG00000008978	-	82	59.538	ENSORLG00020006029	-	60	59.538	Oryzias_latipes_hni
ENSACLG00000008978	-	81	91.379	ENSORLG00020007171	-	97	91.379	Oryzias_latipes_hni
ENSACLG00000008978	-	83	58.788	ENSORLG00020007084	-	77	59.627	Oryzias_latipes_hni
ENSACLG00000008978	-	79	49.425	ENSOMEG00000006327	-	60	49.425	Oryzias_melastigma
ENSACLG00000008978	-	82	62.037	ENSOMEG00000002000	-	69	62.037	Oryzias_melastigma
ENSACLG00000008978	-	85	56.383	ENSOMEG00000021030	-	68	57.222	Oryzias_melastigma
ENSACLG00000008978	-	97	52.727	ENSOMEG00000006903	-	66	57.778	Oryzias_melastigma
ENSACLG00000008978	-	95	57.065	ENSOMEG00000023475	-	67	57.778	Oryzias_melastigma
ENSACLG00000008978	-	93	53.913	ENSOMEG00000002084	-	70	64.634	Oryzias_melastigma
ENSACLG00000008978	-	81	53.614	ENSOMEG00000009566	-	87	53.614	Oryzias_melastigma
ENSACLG00000008978	-	96	57.297	ENSOMEG00000002509	-	76	57.778	Oryzias_melastigma
ENSACLG00000008978	-	83	57.065	ENSOMEG00000012368	-	67	57.778	Oryzias_melastigma
ENSACLG00000008978	-	89	89.231	ENSPREG00000010603	-	64	90.155	Poecilia_reticulata
ENSACLG00000008978	-	100	100.000	ENSPNYG00000020763	-	100	100.000	Pundamilia_nyererei
ENSACLG00000008978	-	80	70.988	ENSPNAG00000018051	-	81	70.988	Pygocentrus_nattereri
ENSACLG00000008978	-	82	60.674	ENSSHAG00000015609	-	81	61.017	Sarcophilus_harrisii
ENSACLG00000008978	-	81	95.181	ENSSDUG00000002394	-	87	95.181	Seriola_dumerili
ENSACLG00000008978	-	81	76.316	ENSSLDG00000024685	-	86	76.316	Seriola_lalandi_dorsalis