EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000008988 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 2766 bases
Position: chr20:30792744-30795509
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000013142	RVT_1	PF00078.27	1.3e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000013469	-	2766	-	ENSACLP00000013142	921 (aa)	-	-

Gene Model

Click here to download ENSACLG00000008988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000008988's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000008988	-	65	57.286	ENSACLG00000017241	-	99	57.286
ENSACLG00000008988	-	94	50.580	ENSACLG00000013374	-	99	50.580
ENSACLG00000008988	-	64	53.741	ENSACLG00000020009	-	100	53.741
ENSACLG00000008988	-	98	50.389	ENSACLG00000002312	-	89	50.389
ENSACLG00000008988	-	71	99.543	ENSACLG00000020849	-	100	99.543
ENSACLG00000008988	-	77	52.891	ENSACLG00000019498	-	99	52.891
ENSACLG00000008988	-	54	60.404	ENSACLG00000023590	-	99	60.404
ENSACLG00000008988	-	61	30.192	ENSACLG00000016231	-	97	30.192
ENSACLG00000008988	-	72	49.850	ENSACLG00000007954	-	99	49.850
ENSACLG00000008988	-	55	51.677	ENSACLG00000008551	-	92	51.677
ENSACLG00000008988	-	51	61.571	ENSACLG00000008558	-	100	61.571
ENSACLG00000008988	-	93	55.064	ENSACLG00000018778	-	85	55.064
ENSACLG00000008988	-	99	54.545	ENSACLG00000007650	-	89	54.545
ENSACLG00000008988	-	74	60.116	ENSACLG00000021942	-	100	60.116
ENSACLG00000008988	-	88	60.321	ENSACLG00000004427	-	99	60.321
ENSACLG00000008988	-	90	99.156	ENSACLG00000003707	-	99	99.156
ENSACLG00000008988	-	50	30.105	ENSACLG00000009011	-	99	30.105
ENSACLG00000008988	-	72	50.300	ENSACLG00000005489	-	99	50.300
ENSACLG00000008988	-	98	58.214	ENSACLG00000017200	-	88	58.214
ENSACLG00000008988	-	81	58.635	ENSACLG00000001773	-	99	58.635
ENSACLG00000008988	-	78	49.860	ENSACLG00000001858	-	99	49.860
ENSACLG00000008988	-	55	56.360	ENSACLG00000023788	-	99	56.360
ENSACLG00000008988	-	50	30.342	ENSACLG00000019420	-	93	30.769
ENSACLG00000008988	-	81	98.522	ENSACLG00000027127	-	100	98.522
ENSACLG00000008988	-	71	52.905	ENSACLG00000000579	-	99	52.905
ENSACLG00000008988	-	71	50.152	ENSACLG00000001102	-	86	50.152
ENSACLG00000008988	-	99	98.911	ENSACLG00000016551	-	91	98.911
ENSACLG00000008988	-	67	99.190	ENSACLG00000027577	-	100	99.190
ENSACLG00000008988	-	60	54.480	ENSACLG00000016956	-	99	54.480
ENSACLG00000008988	-	93	55.374	ENSACLG00000018002	-	100	55.374

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000008988	-	55	36.647	ENSAMXG00000035582	-	99	36.647	Astyanax_mexicanus
ENSACLG00000008988	-	53	30.339	ENSGAGG00000014895	-	98	30.339	Gopherus_agassizii
ENSACLG00000008988	-	73	46.667	ENSKMAG00000004644	-	99	46.667	Kryptolebias_marmoratus
ENSACLG00000008988	-	53	47.727	ENSKMAG00000011565	-	99	47.727	Kryptolebias_marmoratus
ENSACLG00000008988	-	78	60.719	ENSLBEG00000015802	-	100	60.719	Labrus_bergylta
ENSACLG00000008988	-	55	59.412	ENSLBEG00000009271	-	100	59.412	Labrus_bergylta
ENSACLG00000008988	-	60	61.511	ENSLBEG00000008627	-	99	61.511	Labrus_bergylta
ENSACLG00000008988	-	52	62.112	ENSLBEG00000003172	-	99	62.112	Labrus_bergylta
ENSACLG00000008988	-	71	60.703	ENSLBEG00000018374	-	99	60.703	Labrus_bergylta
ENSACLG00000008988	-	50	30.252	ENSLACG00000017681	-	87	30.252	Latimeria_chalumnae
ENSACLG00000008988	-	50	30.042	ENSLACG00000022113	-	83	30.042	Latimeria_chalumnae
ENSACLG00000008988	-	71	99.696	ENSMZEG00005026189	-	100	99.696	Maylandia_zebra
ENSACLG00000008988	-	50	99.565	ENSMZEG00005019302	-	100	99.565	Maylandia_zebra
ENSACLG00000008988	-	56	56.505	ENSMALG00000003303	-	99	56.505	Monopterus_albus
ENSACLG00000008988	-	83	54.156	ENSMALG00000007417	-	99	54.156	Monopterus_albus
ENSACLG00000008988	-	77	54.789	ENSMALG00000020948	-	99	54.789	Monopterus_albus
ENSACLG00000008988	-	54	56.200	ENSMALG00000018635	-	100	56.600	Monopterus_albus
ENSACLG00000008988	-	61	55.814	ENSMALG00000021030	-	99	55.814	Monopterus_albus
ENSACLG00000008988	-	61	55.993	ENSMALG00000007425	-	99	55.993	Monopterus_albus
ENSACLG00000008988	-	61	55.277	ENSMALG00000008286	-	99	55.277	Monopterus_albus
ENSACLG00000008988	-	61	55.814	ENSMALG00000018226	-	99	55.814	Monopterus_albus
ENSACLG00000008988	-	58	94.747	ENSONIG00000020746	-	97	94.747	Oreochromis_niloticus
ENSACLG00000008988	-	74	50.294	ENSONIG00000021263	-	89	50.147	Oreochromis_niloticus
ENSACLG00000008988	-	78	49.581	ENSORLG00000030053	-	98	49.581	Oryzias_latipes
ENSACLG00000008988	-	87	54.931	ENSORLG00000026858	-	94	54.931	Oryzias_latipes
ENSACLG00000008988	-	56	57.722	ENSORLG00000025899	-	97	57.722	Oryzias_latipes
ENSACLG00000008988	-	98	55.165	ENSORLG00000023570	-	92	55.165	Oryzias_latipes
ENSACLG00000008988	-	56	57.529	ENSORLG00000026969	-	97	57.529	Oryzias_latipes
ENSACLG00000008988	-	73	55.672	ENSORLG00000030445	-	98	55.672	Oryzias_latipes
ENSACLG00000008988	-	98	50.887	ENSORLG00000028049	-	88	50.887	Oryzias_latipes
ENSACLG00000008988	-	65	54.925	ENSORLG00000022703	-	95	54.925	Oryzias_latipes
ENSACLG00000008988	-	54	30.677	ENSORLG00020019816	-	95	30.677	Oryzias_latipes_hni
ENSACLG00000008988	-	52	52.807	ENSORLG00020013935	-	99	52.807	Oryzias_latipes_hni
ENSACLG00000008988	-	56	57.722	ENSORLG00020019661	-	97	57.722	Oryzias_latipes_hni
ENSACLG00000008988	-	54	57.287	ENSORLG00015013285	-	98	57.287	Oryzias_latipes_hsok
ENSACLG00000008988	-	60	53.902	ENSOMEG00000008180	-	99	53.902	Oryzias_melastigma
ENSACLG00000008988	-	96	50.676	ENSOMEG00000013089	-	88	50.442	Oryzias_melastigma
ENSACLG00000008988	-	60	35.116	ENSOMEG00000012000	-	99	35.116	Oryzias_melastigma
ENSACLG00000008988	-	96	50.563	ENSOMEG00000004858	-	88	50.332	Oryzias_melastigma
ENSACLG00000008988	-	54	30.829	ENSPSIG00000001343	-	94	30.829	Pelodiscus_sinensis
ENSACLG00000008988	-	59	30.018	ENSPSIG00000000799	-	92	30.018	Pelodiscus_sinensis
ENSACLG00000008988	-	60	58.855	ENSPNYG00000010168	-	99	58.855	Pundamilia_nyererei
ENSACLG00000008988	-	98	45.314	ENSXMAG00000023391	-	91	45.314	Xiphophorus_maculatus
ENSACLG00000008988	-	87	51.436	ENSXMAG00000023609	-	99	51.436	Xiphophorus_maculatus
ENSACLG00000008988	-	70	45.131	ENSXMAG00000024044	-	93	45.131	Xiphophorus_maculatus
ENSACLG00000008988	-	79	46.438	ENSXMAG00000029300	-	100	46.438	Xiphophorus_maculatus
ENSACLG00000008988	-	69	45.723	ENSXMAG00000026064	-	87	45.723	Xiphophorus_maculatus